RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 FOXD4Q12950 439 aaPredicted RBP14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ZSCAN32Q9NX65 697 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ASIC3Q9UHC3 531 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 UTP11Q9Y3A2 253 aaKnown RBP14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SYNJ2BP-COX16A0A087WUM0 186 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 PRDM1O75626 825 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 RILPQ96NA2 401 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 BAG1Q99933 345 aaPredicted RBP14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 COX16Q9P0S2 106 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 CCNL1Q9UK58 526 aaPredicted RBP14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 CD109Q6YHK3 1445 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 CCDC26Q8TAB7 109 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 MRPL44Q9H9J2 332 aaKnown RBP14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 BICC1Q9H694 974 aaKnown RBP14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 EBAG9O00559 213 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SLC1A4P43007 532 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TIMM10P62072 90 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 LONRF3Q496Y0 759 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 DPP8Q6V1X1 898 aaPredicted RBP14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 DYMQ7RTS9 669 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 KRT222Q8N1A0 295 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 BCS1LQ9Y276 419 aa14.72□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TBC1D8BQ0IIM8 1120 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 IQUBQ8NA54 791 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TAF5LO75529 589 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 TBC1D8O95759 1140 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SCYL2Q6P3W7 929 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 MMS19Q96T76 1030 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 WDR97A6NE52 1622 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ADGRF5Q8IZF2 1346 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 CAPN9O14815 690 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 DTNBO60941 627 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 YARSP54577 528 aaKnown RBP14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 LIN9Q5TKA1 542 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SYT10Q6XYQ8 523 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 NOX5Q96PH1 765 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 ARHGEF11O15085 1522 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 SLC9A5Q14940 896 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GADL1Q6ZQY3 521 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 PHLDB2Q86SQ0 1253 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 RABGAP1Q9Y3P9 1069 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 NPHP3Q7Z494 1330 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 POLR2DO15514 142 aaKnown RBP14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 GABPB2Q8TAK5 448 aaPredicted RBP14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 MGARPQ8TDB4 240 aa14.71□□□□□ -0.05
NPHP3-ACAD11-201ENST00000471702 CD2APQ9Y5K6 639 aa14.71□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 TNNC1P63316 161 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 TTC30AQ86WT1 665 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ANKRD2Q9GZV1 360 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ARMT1Q9H993 441 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 NFKBIL1Q9UBC1 381 aaPredicted RBP14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 RNF8O76064 485 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 PPP2R5AQ15172 486 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 NXNQ6DKJ4 435 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 AFAP1L2Q8N4X5 818 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 DDX27Q96GQ7 796 aaKnown RBP14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 FAM193BQ96PV7 902 aaPredicted RBP14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 PTPROQ16827 1216 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 FAM98CQ17RN3 349 aaKnown RBP14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 LMTK3Q96Q04 1460 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CASKIN1Q8WXD9 1431 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 TYRO3Q06418 890 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ARHGAP44Q17R89 818 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 SLC4A1P02730 911 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CCDC141Q6ZP82 1450 aa14.7□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 TESPA1A2RU30 521 aaPredicted RBP14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 TRPC6Q9Y210 931 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ABCC11Q96J66 1382 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 GGA1Q9UJY5 639 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 SUFUQ9UMX1 484 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CASQ2O14958 399 aaPredicted RBP14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 IGHDP01880 384 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 PCK1P35558 622 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 PDE1AP54750 535 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ARHGAP27Q6ZUM4 889 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 H7C1D1 291 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 LACTBP83111 547 aaPredicted RBP14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 FYB2Q5VWT5 728 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 KSR2Q6VAB6 950 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ESYT1Q9BSJ8 1104 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 POLKQ9UBT6 870 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 TPH2Q8IWU9 490 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 TSGA10Q9BZW7 698 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 IGBP1P78318 339 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ATP11AP98196 1134 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 RBBP5Q15291 538 aaKnown RBP14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 POMGNT1Q8WZA1 660 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 NBPF3Q9H094 633 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ZBED4O75132 1171 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ASIC2Q16515 512 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 PALM2Q8IXS6 379 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 KIF9Q9HAQ2 790 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CSADQ9Y600 493 aa14.69□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 RNF113AO15541 343 aaKnown RBP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 NOLC1Q14978 699 aaKnown RBP eCLIP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 BMP2KLQ5H9B9 411 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 APOL6Q9BWW8 343 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ABCF3Q9NUQ8 709 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 GSTA1P08263 222 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 GSTA2P09210 222 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms