RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 CYP7A1P22680 504 aa18.25■□□□□ 0.51
VPS8-221ENST00000471655 LACTBP83111 547 aaPredicted RBP18.25■□□□□ 0.51
VPS8-221ENST00000471655 MAP3K12Q12852 859 aa18.25■□□□□ 0.51
VPS8-221ENST00000471655 FOXP4Q8IVH2 680 aaPredicted RBP18.25■□□□□ 0.51
VPS8-221ENST00000471655 TGFBRAP1Q8WUH2 860 aa18.25■□□□□ 0.51
VPS8-221ENST00000471655 SLC45A1Q9Y2W3 748 aa18.25■□□□□ 0.51
VPS8-221ENST00000471655 CAP2P40123 477 aa18.24■□□□□ 0.51
VPS8-221ENST00000471655 KIF22Q14807 665 aa18.24■□□□□ 0.51
VPS8-221ENST00000471655 TTF1Q15361 905 aaPredicted RBP18.24■□□□□ 0.51
VPS8-221ENST00000471655 C20orf194Q5TEA3 1177 aa18.24■□□□□ 0.51
VPS8-221ENST00000471655 ANTXR1Q9H6X2 564 aa18.24■□□□□ 0.51
VPS8-221ENST00000471655 FLT1P17948 1338 aa18.23■□□□□ 0.51
VPS8-221ENST00000471655 FOCADQ5VW36 1801 aa18.23■□□□□ 0.51
VPS8-221ENST00000471655 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
VPS8-221ENST00000471655 IFIT2P09913 472 aaKnown RBP18.23■□□□□ 0.51
VPS8-221ENST00000471655 ARMC5Q96C12 935 aa18.23■□□□□ 0.51
VPS8-221ENST00000471655 PARK7Q99497 189 aaKnown RBP18.23■□□□□ 0.51
VPS8-221ENST00000471655 CDK5RAP2Q96SN8 1893 aa18.22■□□□□ 0.51
VPS8-221ENST00000471655 FAM196BA6NMK8 535 aa18.22■□□□□ 0.51
VPS8-221ENST00000471655 PRMT2P55345 433 aa18.22■□□□□ 0.51
VPS8-221ENST00000471655 MAPKAPK5Q8IW41 473 aa18.22■□□□□ 0.51
VPS8-221ENST00000471655 MAGEB6Q8N7X4 407 aa18.22■□□□□ 0.51
VPS8-221ENST00000471655 GINM1Q9NU53 330 aa18.22■□□□□ 0.51
VPS8-221ENST00000471655 NDUFB9Q9Y6M9 179 aa18.22■□□□□ 0.51
VPS8-221ENST00000471655 APBB1O00213 710 aa18.21■□□□□ 0.51
VPS8-221ENST00000471655 DYNLL1P63167 89 aaKnown RBP18.21■□□□□ 0.51
VPS8-221ENST00000471655 RRP1BQ14684 758 aaKnown RBP18.21■□□□□ 0.51
VPS8-221ENST00000471655 CPA4Q9UI42 421 aa18.21■□□□□ 0.51
VPS8-221ENST00000471655 SIPA1L1O43166 1804 aa18.21■□□□□ 0.51
VPS8-221ENST00000471655 PTPRFP10586 1907 aa18.2■□□□□ 0.5
VPS8-221ENST00000471655 TRIM75PA6NK02 468 aa18.2■□□□□ 0.5
VPS8-221ENST00000471655 USP17L5A8MUK1 530 aa18.2■□□□□ 0.5
VPS8-221ENST00000471655 BCRP11274 1271 aa18.2■□□□□ 0.5
VPS8-221ENST00000471655 PROCA1Q8NCQ7 364 aaPredicted RBP18.2■□□□□ 0.5
VPS8-221ENST00000471655 ZNF280CQ8ND82 737 aa18.2■□□□□ 0.5
VPS8-221ENST00000471655 PALD1Q9ULE6 856 aa18.2■□□□□ 0.5
VPS8-221ENST00000471655 AGTPBP1Q9UPW5 1226 aa18.2■□□□□ 0.5
VPS8-221ENST00000471655 HTTP42858 3142 aa18.2■□□□□ 0.5
VPS8-221ENST00000471655 HLA-DOAP06340 250 aa18.19■□□□□ 0.5
VPS8-221ENST00000471655 ATP5JP18859 108 aa18.19■□□□□ 0.5
VPS8-221ENST00000471655 SPP2Q13103 211 aa18.19■□□□□ 0.5
VPS8-221ENST00000471655 GADL1Q6ZQY3 521 aa18.19■□□□□ 0.5
VPS8-221ENST00000471655 MIGA1Q8NAN2 632 aa18.19■□□□□ 0.5
VPS8-221ENST00000471655 WDR18Q9BV38 432 aa18.19■□□□□ 0.5
VPS8-221ENST00000471655 ARHGAP39Q9C0H5 1083 aa18.19■□□□□ 0.5
VPS8-221ENST00000471655 DNAJC18Q9H819 358 aa18.19■□□□□ 0.5
VPS8-221ENST00000471655 AS3MTQ9HBK9 375 aa18.19■□□□□ 0.5
VPS8-221ENST00000471655 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.19■□□□□ 0.5
VPS8-221ENST00000471655 ASNSP08243 561 aa18.18■□□□□ 0.5
VPS8-221ENST00000471655 CYP2C8P10632 490 aa18.18■□□□□ 0.5
VPS8-221ENST00000471655 USP5P45974 858 aa18.18■□□□□ 0.5
VPS8-221ENST00000471655 SH3D19Q5HYK7 790 aa18.18■□□□□ 0.5
VPS8-221ENST00000471655 NBPF11Q86T75 865 aa18.18■□□□□ 0.5
VPS8-221ENST00000471655 CCDC84Q86UT8 332 aaPredicted RBP18.18■□□□□ 0.5
VPS8-221ENST00000471655 CRACR2BQ8N4Y2 399 aaPredicted RBP18.18■□□□□ 0.5
VPS8-221ENST00000471655 RIOK1Q9BRS2 568 aaKnown RBP18.18■□□□□ 0.5
VPS8-221ENST00000471655 TRIM34Q9BYJ4 488 aa18.18■□□□□ 0.5
VPS8-221ENST00000471655 LRRCC1Q9C099 1032 aa18.18■□□□□ 0.5
VPS8-221ENST00000471655 PTCH2Q9Y6C5 1203 aa18.18■□□□□ 0.5
VPS8-221ENST00000471655 ATAD5Q96QE3 1844 aa18.18■□□□□ 0.5
VPS8-221ENST00000471655 PDE6AP16499 860 aa18.17■□□□□ 0.5
VPS8-221ENST00000471655 HOXD10P28358 340 aa18.17■□□□□ 0.5
VPS8-221ENST00000471655 CTGFP29279 349 aa18.17■□□□□ 0.5
VPS8-221ENST00000471655 PSMC4P43686 418 aa18.17■□□□□ 0.5
VPS8-221ENST00000471655 SLC9C2Q5TAH2 1124 aa18.17■□□□□ 0.5
VPS8-221ENST00000471655 ZNF333Q96JL9 665 aa18.17■□□□□ 0.5
VPS8-221ENST00000471655 EHD4Q9H223 541 aa18.17■□□□□ 0.5
VPS8-221ENST00000471655 MAGEB6P1A0A0J9YX57 407 aa18.16■□□□□ 0.5
VPS8-221ENST00000471655 GOLIM4O00461 696 aa18.16■□□□□ 0.5
VPS8-221ENST00000471655 SLC9C1Q4G0N8 1177 aa18.16■□□□□ 0.5
VPS8-221ENST00000471655 TTC6Q86TZ1 520 aa18.16■□□□□ 0.5
VPS8-221ENST00000471655 TRIM47Q96LD4 638 aa18.16■□□□□ 0.5
VPS8-221ENST00000471655 DCTPP1Q9H773 170 aa18.16■□□□□ 0.5
VPS8-221ENST00000471655 SRRDQ9UH36 339 aa18.16■□□□□ 0.5
VPS8-221ENST00000471655 SAP30BPQ9UHR5 308 aaKnown RBP18.16■□□□□ 0.5
VPS8-221ENST00000471655 PNMA3Q9UL41 463 aa18.16■□□□□ 0.5
VPS8-221ENST00000471655 TNRC18O15417 2968 aaPredicted RBP18.16■□□□□ 0.5
VPS8-221ENST00000471655 TCRBV5S4A2TA0A5A2 114 aa18.15■□□□□ 0.5
VPS8-221ENST00000471655 JAG1P78504 1218 aa18.15■□□□□ 0.5
VPS8-221ENST00000471655 PABPC4Q13310 644 aaKnown RBP eCLIP18.15■□□□□ 0.5
VPS8-221ENST00000471655 TREML2Q5T2D2 321 aa18.15■□□□□ 0.5
VPS8-221ENST00000471655 TATDN1Q6P1N9 297 aa18.15■□□□□ 0.5
VPS8-221ENST00000471655 DNAJC2Q99543 621 aaKnown RBP18.15■□□□□ 0.5
VPS8-221ENST00000471655 HAUS7Q99871 368 aa18.15■□□□□ 0.5
VPS8-221ENST00000471655 PAG1Q9NWQ8 432 aa18.15■□□□□ 0.5
VPS8-221ENST00000471655 ZNF532Q9HCE3 1301 aa18.15■□□□□ 0.5
VPS8-221ENST00000471655 MYH1P12882 1939 aa18.15■□□□□ 0.5
VPS8-221ENST00000471655 LOC285556D6RIA3 1793 aa18.14■□□□□ 0.5
VPS8-221ENST00000471655 RBBP6Q7Z6E9 1792 aaKnown RBP18.14■□□□□ 0.5
VPS8-221ENST00000471655 ZSWIM8A7E2V4 1837 aa18.14■□□□□ 0.5
VPS8-221ENST00000471655 C19orf81C9J6K1 198 aa18.14■□□□□ 0.49
VPS8-221ENST00000471655 FMNL1O95466 1100 aaPredicted RBP18.14■□□□□ 0.49
VPS8-221ENST00000471655 OSBPP22059 807 aa18.14■□□□□ 0.49
VPS8-221ENST00000471655 HMGCS2P54868 508 aa18.14■□□□□ 0.49
VPS8-221ENST00000471655 FCGRTP55899 365 aa18.14■□□□□ 0.49
VPS8-221ENST00000471655 BACE1P56817 501 aa18.14■□□□□ 0.49
VPS8-221ENST00000471655 SMCR8Q8TEV9 937 aaPredicted RBP18.14■□□□□ 0.49
VPS8-221ENST00000471655 CRNKL1Q9BZJ0 848 aaKnown RBP18.14■□□□□ 0.49
VPS8-221ENST00000471655 BOLA2Q9H3K6 86 aa18.14■□□□□ 0.49
VPS8-221ENST00000471655 SERPINB13Q9UIV8 391 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms