RNA–Protein interactions for RNA: ENST00000471462.2

SUSD3-204, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-204ENST00000471462 MAP3K21Q5TCX8 1036 aa11.78□□□□□ -0.52
SUSD3-204ENST00000471462 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
SUSD3-204ENST00000471462 IDI2Q9BXS1 227 aa11.78□□□□□ -0.52
SUSD3-204ENST00000471462 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.78□□□□□ -0.52
SUSD3-204ENST00000471462 GCLCP48506 637 aaPredicted RBP11.77□□□□□ -0.53
SUSD3-204ENST00000471462 SLC4A10Q6U841 1118 aa11.77□□□□□ -0.53
SUSD3-204ENST00000471462 CCDC84Q86UT8 332 aaPredicted RBP11.77□□□□□ -0.53
SUSD3-204ENST00000471462 KLHDC4Q8TBB5 520 aa11.77□□□□□ -0.53
SUSD3-204ENST00000471462 TRIB2Q92519 343 aa11.77□□□□□ -0.53
SUSD3-204ENST00000471462 PRDM6Q9NQX0 595 aa11.77□□□□□ -0.53
SUSD3-204ENST00000471462 PNMA3Q9UL41 463 aa11.77□□□□□ -0.53
SUSD3-204ENST00000471462 LRRFIP2Q9Y608 721 aaKnown RBP11.77□□□□□ -0.53
SUSD3-204ENST00000471462 DOCK3Q8IZD9 2030 aa11.77□□□□□ -0.53
SUSD3-204ENST00000471462 RFX7Q2KHR2 1363 aa11.77□□□□□ -0.53
SUSD3-204ENST00000471462 PTPRFP10586 1907 aa11.76□□□□□ -0.53
SUSD3-204ENST00000471462 CDH23Q9H251 3354 aa11.76□□□□□ -0.53
SUSD3-204ENST00000471462 DDTLA6NHG4 134 aaPredicted RBP11.76□□□□□ -0.53
SUSD3-204ENST00000471462 BCAR3O75815 825 aa11.76□□□□□ -0.53
SUSD3-204ENST00000471462 LDHBP07195 334 aaKnown RBP11.76□□□□□ -0.53
SUSD3-204ENST00000471462 RARSP54136 660 aaKnown RBP11.76□□□□□ -0.53
SUSD3-204ENST00000471462 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
SUSD3-204ENST00000471462 LRRC26Q2I0M4 334 aa11.76□□□□□ -0.53
SUSD3-204ENST00000471462 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
SUSD3-204ENST00000471462 LPIN2Q92539 896 aa11.76□□□□□ -0.53
SUSD3-204ENST00000471462 SMC4Q9NTJ3 1288 aa11.76□□□□□ -0.53
SUSD3-204ENST00000471462 SALL1Q9NSC2 1324 aa11.76□□□□□ -0.53
SUSD3-204ENST00000471462 PHIPQ8WWQ0 1821 aa11.76□□□□□ -0.53
SUSD3-204ENST00000471462 AK9Q5TCS8 1911 aa11.76□□□□□ -0.53
SUSD3-204ENST00000471462 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
SUSD3-204ENST00000471462 CT47B1P0C2W7 299 aaPredicted RBP11.75□□□□□ -0.53
SUSD3-204ENST00000471462 ZSCAN29Q8IWY8 852 aaPredicted RBP11.75□□□□□ -0.53
SUSD3-204ENST00000471462 FAM161BQ96MY7 647 aa11.75□□□□□ -0.53
SUSD3-204ENST00000471462 DDX4Q9NQI0 724 aaKnown RBP11.75□□□□□ -0.53
SUSD3-204ENST00000471462 DOCK2Q92608 1830 aa11.74□□□□□ -0.53
SUSD3-204ENST00000471462 XRCC5P13010 732 aaKnown RBP11.74□□□□□ -0.53
SUSD3-204ENST00000471462 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
SUSD3-204ENST00000471462 SLC5A1P13866 664 aa11.74□□□□□ -0.53
SUSD3-204ENST00000471462 EVX2Q03828 476 aa11.74□□□□□ -0.53
SUSD3-204ENST00000471462 SPP2Q13103 211 aa11.74□□□□□ -0.53
SUSD3-204ENST00000471462 ALDH1L2Q3SY69 923 aa11.74□□□□□ -0.53
SUSD3-204ENST00000471462 LHX8Q68G74 356 aa11.74□□□□□ -0.53
SUSD3-204ENST00000471462 ASCC2Q9H1I8 757 aaPredicted RBP11.74□□□□□ -0.53
SUSD3-204ENST00000471462 MORF4L1Q9UBU8 362 aa11.74□□□□□ -0.53
SUSD3-204ENST00000471462 GAKO14976 1311 aa11.74□□□□□ -0.53
SUSD3-204ENST00000471462 DOCK1Q14185 1865 aa11.74□□□□□ -0.53
SUSD3-204ENST00000471462 TTC28Q96AY4 2481 aa11.74□□□□□ -0.53
SUSD3-204ENST00000471462 EYA2O00167 538 aa11.73□□□□□ -0.53
SUSD3-204ENST00000471462 PLXNB2O15031 1838 aa11.73□□□□□ -0.53
SUSD3-204ENST00000471462 TBC1D12O60347 775 aa11.73□□□□□ -0.53
SUSD3-204ENST00000471462 CYP2B6P20813 491 aa11.73□□□□□ -0.53
SUSD3-204ENST00000471462 RFX5P48382 616 aaPredicted RBP11.73□□□□□ -0.53
SUSD3-204ENST00000471462 CACNB2Q08289 660 aaPredicted RBP11.73□□□□□ -0.53
SUSD3-204ENST00000471462 CDX2Q99626 313 aaPredicted RBP11.73□□□□□ -0.53
SUSD3-204ENST00000471462 NOB1Q9ULX3 412 aaKnown RBP11.73□□□□□ -0.53
SUSD3-204ENST00000471462 TNNQ9UQP3 1299 aa11.73□□□□□ -0.53
SUSD3-204ENST00000471462 ZBTB22O15209 634 aa11.72□□□□□ -0.53
SUSD3-204ENST00000471462 HMGCS2P54868 508 aa11.72□□□□□ -0.53
SUSD3-204ENST00000471462 PABPC4Q13310 644 aaKnown RBP eCLIP11.72□□□□□ -0.53
SUSD3-204ENST00000471462 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
SUSD3-204ENST00000471462 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
SUSD3-204ENST00000471462 ATG9AQ7Z3C6 839 aa11.72□□□□□ -0.53
SUSD3-204ENST00000471462 ZNF280CQ8ND82 737 aa11.72□□□□□ -0.53
SUSD3-204ENST00000471462 MAFAQ8NHW3 353 aaPredicted RBP11.72□□□□□ -0.53
SUSD3-204ENST00000471462 USP6NLQ92738 828 aa11.72□□□□□ -0.53
SUSD3-204ENST00000471462 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
SUSD3-204ENST00000471462 GNL3LQ9NVN8 582 aaKnown RBP11.72□□□□□ -0.53
SUSD3-204ENST00000471462 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
SUSD3-204ENST00000471462 FAM196BA6NMK8 535 aa11.71□□□□□ -0.53
SUSD3-204ENST00000471462 SEMA3EO15041 775 aa11.71□□□□□ -0.53
SUSD3-204ENST00000471462 CCND3P30281 292 aaPredicted RBP11.71□□□□□ -0.53
SUSD3-204ENST00000471462 PICALMQ13492 652 aa11.71□□□□□ -0.53
SUSD3-204ENST00000471462 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.53
SUSD3-204ENST00000471462 SOCS4Q8WXH5 440 aa11.71□□□□□ -0.53
SUSD3-204ENST00000471462 FRAT1Q92837 279 aaPredicted RBP11.71□□□□□ -0.53
SUSD3-204ENST00000471462 NUDT12Q9BQG2 462 aa11.71□□□□□ -0.53
SUSD3-204ENST00000471462 TBC1D2Q9BYX2 928 aa11.71□□□□□ -0.53
SUSD3-204ENST00000471462 OSBPL5Q9H0X9 879 aaPredicted RBP11.71□□□□□ -0.53
SUSD3-204ENST00000471462 SEMA6BQ9H3T3 888 aa11.71□□□□□ -0.53
SUSD3-204ENST00000471462 DENND2AQ9ULE3 1009 aa11.71□□□□□ -0.53
SUSD3-204ENST00000471462 PEX10O60683 326 aa11.7□□□□□ -0.54
SUSD3-204ENST00000471462 ZKSCAN1P17029 563 aaPredicted RBP11.7□□□□□ -0.54
SUSD3-204ENST00000471462 PHKA1P46020 1223 aa11.7□□□□□ -0.54
SUSD3-204ENST00000471462 RRP1BQ14684 758 aaKnown RBP11.7□□□□□ -0.54
SUSD3-204ENST00000471462 P2RX7Q99572 595 aaKnown RBP11.7□□□□□ -0.54
SUSD3-204ENST00000471462 LBHD1Q9BQE6 289 aaPredicted RBP11.7□□□□□ -0.54
SUSD3-204ENST00000471462 USP44Q9H0E7 712 aa11.7□□□□□ -0.54
SUSD3-204ENST00000471462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.7□□□□□ -0.54
SUSD3-204ENST00000471462 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
SUSD3-204ENST00000471462 RCAN3Q9UKA8 241 aa11.7□□□□□ -0.54
SUSD3-204ENST00000471462 MYH13Q9UKX3 1938 aa11.7□□□□□ -0.54
SUSD3-204ENST00000471462 USP17L5A8MUK1 530 aa11.69□□□□□ -0.54
SUSD3-204ENST00000471462 HOXA7P31268 230 aaPredicted RBP11.69□□□□□ -0.54
SUSD3-204ENST00000471462 CAP2P40123 477 aa11.69□□□□□ -0.54
SUSD3-204ENST00000471462 BTDP43251 543 aa11.69□□□□□ -0.54
SUSD3-204ENST00000471462 RHBDL3P58872 404 aa11.69□□□□□ -0.54
SUSD3-204ENST00000471462 CCL14Q16627 93 aa11.69□□□□□ -0.54
SUSD3-204ENST00000471462 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
SUSD3-204ENST00000471462 MORN1Q5T089 497 aa11.69□□□□□ -0.54
SUSD3-204ENST00000471462 ZGPATQ8N5A5 531 aaKnown RBP11.69□□□□□ -0.54
SUSD3-204ENST00000471462 GPRC5AQ8NFJ5 357 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms