RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 PXYLP1Q8TE99 480 aa18.77■□□□□ 0.6
CNOT3-206ENST00000471126 KIF1BPQ96EK5 621 aa18.77■□□□□ 0.6
CNOT3-206ENST00000471126 DCTPP1Q9H773 170 aa18.77■□□□□ 0.6
CNOT3-206ENST00000471126 PPATQ06203 517 aa18.76■□□□□ 0.59
CNOT3-206ENST00000471126 CHAF1AQ13111 956 aaPredicted RBP18.76■□□□□ 0.59
CNOT3-206ENST00000471126 SYMPKQ92797 1274 aaKnown RBP18.76■□□□□ 0.59
CNOT3-206ENST00000471126 NEUROD6Q96NK8 337 aa18.76■□□□□ 0.59
CNOT3-206ENST00000471126 DBNDD2Q9BQY9 259 aa18.76■□□□□ 0.59
CNOT3-206ENST00000471126 SUPT16HQ9Y5B9 1047 aaKnown RBP18.76■□□□□ 0.59
CNOT3-206ENST00000471126 FRAT2O75474 233 aaPredicted RBP18.75■□□□□ 0.59
CNOT3-206ENST00000471126 MAFAQ8NHW3 353 aaPredicted RBP18.75■□□□□ 0.59
CNOT3-206ENST00000471126 NBPF3Q9H094 633 aa18.75■□□□□ 0.59
CNOT3-206ENST00000471126 TLR7Q9NYK1 1049 aaKnown RBP18.75■□□□□ 0.59
CNOT3-206ENST00000471126 TTF2Q9UNY4 1162 aaKnown RBP18.75■□□□□ 0.59
CNOT3-206ENST00000471126 UQCRFS1P1P0C7P4 283 aa18.74■□□□□ 0.59
CNOT3-206ENST00000471126 CYP2C8P10632 490 aa18.74■□□□□ 0.59
CNOT3-206ENST00000471126 PLA2G5P39877 138 aa18.74■□□□□ 0.59
CNOT3-206ENST00000471126 ANKLE1Q8NAG6 615 aa18.74■□□□□ 0.59
CNOT3-206ENST00000471126 CDX2Q99626 313 aaPredicted RBP18.74■□□□□ 0.59
CNOT3-206ENST00000471126 HMG20BQ9P0W2 317 aa18.74■□□□□ 0.59
CNOT3-206ENST00000471126 MAST3O60307 1309 aa18.74■□□□□ 0.59
CNOT3-206ENST00000471126 MCAMP43121 646 aa18.73■□□□□ 0.59
CNOT3-206ENST00000471126 IRF5Q13568 498 aa18.73■□□□□ 0.59
CNOT3-206ENST00000471126 MOGSQ13724 837 aa18.73■□□□□ 0.59
CNOT3-206ENST00000471126 PARK7Q99497 189 aaKnown RBP18.73■□□□□ 0.59
CNOT3-206ENST00000471126 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.73■□□□□ 0.597e-6■□□□□ 9.4
CNOT3-206ENST00000471126 C11orf49Q9H6J7 331 aa18.73■□□□□ 0.59
CNOT3-206ENST00000471126 TAOK2Q9UL54 1235 aa18.73■□□□□ 0.59
CNOT3-206ENST00000471126 EYSQ5T1H1 3165 aa18.72■□□□□ 0.59
CNOT3-206ENST00000471126 CRKP46108 304 aa18.72■□□□□ 0.59
CNOT3-206ENST00000471126 CACNB3P54284 484 aa18.72■□□□□ 0.59
CNOT3-206ENST00000471126 HDAC1Q13547 482 aaPredicted RBP18.72■□□□□ 0.59
CNOT3-206ENST00000471126 ZNF697Q5TEC3 545 aa18.72■□□□□ 0.59
CNOT3-206ENST00000471126 HHIPL2Q6UWX4 724 aa18.72■□□□□ 0.59
CNOT3-206ENST00000471126 ZGPATQ8N5A5 531 aaKnown RBP18.72■□□□□ 0.59
CNOT3-206ENST00000471126 SPATA5Q8NB90 893 aa18.72■□□□□ 0.59
CNOT3-206ENST00000471126 FAM122AQ96E09 287 aa18.72■□□□□ 0.59
CNOT3-206ENST00000471126 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
CNOT3-206ENST00000471126 MAST2Q6P0Q8 1798 aa18.71■□□□□ 0.59
CNOT3-206ENST00000471126 TNPO2O14787 897 aaKnown RBP18.71■□□□□ 0.59
CNOT3-206ENST00000471126 IGSF3O75054 1194 aa18.71■□□□□ 0.59
CNOT3-206ENST00000471126 PRDX5P30044 214 aa18.71■□□□□ 0.59
CNOT3-206ENST00000471126 MDM2Q00987 491 aaPredicted RBP18.71■□□□□ 0.59
CNOT3-206ENST00000471126 GORABQ5T7V8 394 aa18.71■□□□□ 0.59
CNOT3-206ENST00000471126 AACSQ86V21 672 aa18.71■□□□□ 0.59
CNOT3-206ENST00000471126 ZDHHC15Q96MV8 337 aa18.71■□□□□ 0.59
CNOT3-206ENST00000471126 CCDC8Q9H0W5 538 aaPredicted RBP18.71■□□□□ 0.59
CNOT3-206ENST00000471126 IL1RAPL2Q9NP60 686 aa18.71■□□□□ 0.59
CNOT3-206ENST00000471126 KCNH4Q9UQ05 1017 aa18.71■□□□□ 0.59
CNOT3-206ENST00000471126 INPP5BP32019 993 aa18.7■□□□□ 0.58
CNOT3-206ENST00000471126 CCDC158Q5M9N0 1113 aa18.7■□□□□ 0.58
CNOT3-206ENST00000471126 GPAT2Q6NUI2 795 aa18.7■□□□□ 0.58
CNOT3-206ENST00000471126 PI16Q6UXB8 463 aa18.7■□□□□ 0.58
CNOT3-206ENST00000471126 CLASRPQ8N2M8 674 aaKnown RBP18.7■□□□□ 0.58
CNOT3-206ENST00000471126 TEKT1Q969V4 418 aa18.7■□□□□ 0.58
CNOT3-206ENST00000471126 DOCK2Q92608 1830 aa18.7■□□□□ 0.58
CNOT3-206ENST00000471126 TNFRSF10AO00220 468 aa18.69■□□□□ 0.58
CNOT3-206ENST00000471126 APOBEC3HQ6NTF7 200 aaKnown RBP18.69■□□□□ 0.58
CNOT3-206ENST00000471126 MIGA2Q7L4E1 593 aa18.69■□□□□ 0.58
CNOT3-206ENST00000471126 EXOC6Q8TAG9 804 aa18.69■□□□□ 0.58
CNOT3-206ENST00000471126 ZNF384Q8TF68 577 aa18.69■□□□□ 0.58
CNOT3-206ENST00000471126 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.69■□□□□ 0.58
CNOT3-206ENST00000471126 FAM163AQ96GL9 167 aaPredicted RBP18.69■□□□□ 0.58
CNOT3-206ENST00000471126 LRRCC1Q9C099 1032 aa18.69■□□□□ 0.58
CNOT3-206ENST00000471126 GAKO14976 1311 aa18.69■□□□□ 0.58
CNOT3-206ENST00000471126 PRUNE2Q8WUY3 3088 aa18.68■□□□□ 0.58
CNOT3-206ENST00000471126 LDHBP07195 334 aaKnown RBP18.68■□□□□ 0.58
CNOT3-206ENST00000471126 TTC39AQ5SRH9 613 aa18.68■□□□□ 0.58
CNOT3-206ENST00000471126 MYH2Q9UKX2 1941 aa18.68■□□□□ 0.58
CNOT3-206ENST00000471126 CYP2E1P05181 493 aaPredicted RBP18.67■□□□□ 0.58
CNOT3-206ENST00000471126 DCAF15Q66K64 600 aa18.67■□□□□ 0.58
CNOT3-206ENST00000471126 SPTY2D1Q68D10 685 aaPredicted RBP18.67■□□□□ 0.58
CNOT3-206ENST00000471126 HOOK2Q96ED9 719 aa18.67■□□□□ 0.58
CNOT3-206ENST00000471126 ZNF341Q9BYN7 854 aa18.67■□□□□ 0.58
CNOT3-206ENST00000471126 SEMA6BQ9H3T3 888 aa18.67■□□□□ 0.58
CNOT3-206ENST00000471126 DAGLAQ9Y4D2 1042 aa18.67■□□□□ 0.58
CNOT3-206ENST00000471126 MYO5AQ9Y4I1 1855 aaKnown RBP18.67■□□□□ 0.58
CNOT3-206ENST00000471126 DIXDC1Q155Q3 683 aa18.66■□□□□ 0.58
CNOT3-206ENST00000471126 FKBP1CQ5VVH2 108 aa18.66■□□□□ 0.58
CNOT3-206ENST00000471126 MYLIPQ8WY64 445 aa18.66■□□□□ 0.58
CNOT3-206ENST00000471126 RFX7Q2KHR2 1363 aa18.66■□□□□ 0.58
CNOT3-206ENST00000471126 APBB1O00213 710 aa18.65■□□□□ 0.58
CNOT3-206ENST00000471126 NSUN4Q96CB9 384 aaKnown RBP18.65■□□□□ 0.58
CNOT3-206ENST00000471126 PFASO15067 1338 aa18.65■□□□□ 0.58
CNOT3-206ENST00000471126 TTC28Q96AY4 2481 aa18.64■□□□□ 0.58
CNOT3-206ENST00000471126 TMEM265A0A087WTH1 108 aa18.64■□□□□ 0.57
CNOT3-206ENST00000471126 IFIT2P09913 472 aaKnown RBP18.64■□□□□ 0.57
CNOT3-206ENST00000471126 HOXD11P31277 338 aaPredicted RBP18.64■□□□□ 0.57
CNOT3-206ENST00000471126 ZAP70P43403 619 aa18.64■□□□□ 0.57
CNOT3-206ENST00000471126 MECOMQ03112 1051 aa18.64■□□□□ 0.57
CNOT3-206ENST00000471126 TBC1D9Q6ZT07 1266 aa18.64■□□□□ 0.57
CNOT3-206ENST00000471126 FAM83AQ86UY5 434 aa18.64■□□□□ 0.57
CNOT3-206ENST00000471126 COA7Q96BR5 231 aa18.64■□□□□ 0.57
CNOT3-206ENST00000471126 HMX1Q9NP08 348 aaPredicted RBP18.64■□□□□ 0.57
CNOT3-206ENST00000471126 ABCF2Q9UG63 623 aa18.64■□□□□ 0.57
CNOT3-206ENST00000471126 OGDHLQ9ULD0 1010 aa18.64■□□□□ 0.57
CNOT3-206ENST00000471126 COL2A1P02458 1487 aaPredicted RBP18.64■□□□□ 0.57
CNOT3-206ENST00000471126 LAMA2P24043 3122 aaKnown RBP18.63■□□□□ 0.57
CNOT3-206ENST00000471126 SMARCA5O60264 1052 aaPredicted RBP18.63■□□□□ 0.57
CNOT3-206ENST00000471126 ATP5JP18859 108 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms