RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CHPF2Q9P2E5 772 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 TSPYL4Q9UJ04 414 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 MSRAQ9UJ68 235 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 SPEF2Q9C093 1822 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 GCN1Q92616 2671 aaKnown RBP7.58□□□□□ -1.2
VARS-222ENST00000470953 CYSRT1A8MQ03 144 aa7.58□□□□□ -1.2
VARS-222ENST00000470953 CYP2B6P20813 491 aa7.58□□□□□ -1.2
VARS-222ENST00000470953 CACNB3P54284 484 aa7.58□□□□□ -1.2
VARS-222ENST00000470953 DDX10Q13206 875 aaKnown RBP7.58□□□□□ -1.2
VARS-222ENST00000470953 TRIM28Q13263 835 aaKnown RBP7.58□□□□□ -1.2
VARS-222ENST00000470953 RAB30Q15771 203 aa7.58□□□□□ -1.2
VARS-222ENST00000470953 ANKRD13CQ8N6S4 541 aa7.58□□□□□ -1.2
VARS-222ENST00000470953 SH2B1Q9NRF2 756 aaPredicted RBP7.58□□□□□ -1.2
VARS-222ENST00000470953 RPAP1Q9BWH6 1393 aaPredicted RBP7.58□□□□□ -1.2
VARS-222ENST00000470953 GAKO14976 1311 aa7.57□□□□□ -1.2
VARS-222ENST00000470953 MAPK8IP3Q9UPT6 1336 aa7.57□□□□□ -1.2
VARS-222ENST00000470953 H0Y858 1186 aa7.57□□□□□ -1.2
VARS-222ENST00000470953 GTPBP6O43824 516 aaPredicted RBP7.57□□□□□ -1.2
VARS-222ENST00000470953 POU3F3P20264 500 aaPredicted RBP7.57□□□□□ -1.2
VARS-222ENST00000470953 INPP5BP32019 993 aa7.57□□□□□ -1.2
VARS-222ENST00000470953 SNX17Q15036 470 aa7.57□□□□□ -1.2
VARS-222ENST00000470953 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
VARS-222ENST00000470953 ADSSL1Q8N142 457 aa7.57□□□□□ -1.2
VARS-222ENST00000470953 GREM2Q9H772 168 aa7.57□□□□□ -1.2
VARS-222ENST00000470953 TLR9Q9NR96 1032 aa7.57□□□□□ -1.2
VARS-222ENST00000470953 DNM1LO00429 736 aa7.56□□□□□ -1.2
VARS-222ENST00000470953 RAG1P15918 1043 aa7.56□□□□□ -1.2
VARS-222ENST00000470953 RALBP1Q15311 655 aa7.56□□□□□ -1.2
VARS-222ENST00000470953 C16orf59Q7L2K0 433 aa7.56□□□□□ -1.2
VARS-222ENST00000470953 TTLL11Q8NHH1 800 aa7.56□□□□□ -1.2
VARS-222ENST00000470953 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.56□□□□□ -1.2
VARS-222ENST00000470953 FSD1Q9BTV5 496 aa7.56□□□□□ -1.2
VARS-222ENST00000470953 LEMD3Q9Y2U8 911 aa7.56□□□□□ -1.2
VARS-222ENST00000470953 ZFYVE26Q68DK2 2539 aa7.56□□□□□ -1.2
VARS-222ENST00000470953 NAV2Q8IVL1 2488 aa7.56□□□□□ -1.2
VARS-222ENST00000470953 WDR87Q6ZQQ6 2873 aa7.56□□□□□ -1.2
VARS-222ENST00000470953 EPOPA6NHQ4 379 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 PCCAP05165 728 aaPredicted RBP7.55□□□□□ -1.2
VARS-222ENST00000470953 MYOGP15173 224 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 DSG3P32926 999 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 CTSWP56202 376 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 TLE2Q04725 743 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 TNFAIP1Q13829 316 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 TMEM240Q5SV17 173 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 GJC2Q5T442 439 aaPredicted RBP7.55□□□□□ -1.2
VARS-222ENST00000470953 PPP2R2DQ66LE6 453 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 ERICH6Q7L0X2 663 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 MIGA2Q7L4E1 593 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 LURAP1LQ8IV03 231 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 DZIP1LQ8IYY4 767 aaKnown RBP7.55□□□□□ -1.2
VARS-222ENST00000470953 SMCR8Q8TEV9 937 aaPredicted RBP7.55□□□□□ -1.2
VARS-222ENST00000470953 PLEKHF1Q96S99 279 aa7.55□□□□□ -1.2
VARS-222ENST00000470953 CDC5LQ99459 802 aaKnown RBP7.55□□□□□ -1.2
VARS-222ENST00000470953 PNNQ9H307 717 aaKnown RBP7.55□□□□□ -1.2
VARS-222ENST00000470953 MYBBP1AQ9BQG0 1328 aaKnown RBP7.54□□□□□ -1.2
VARS-222ENST00000470953 KIAA0355O15063 1070 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 CLTBP09497 229 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 RABGGTBP53611 331 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 VCPP55072 806 aaKnown RBP7.54□□□□□ -1.2
VARS-222ENST00000470953 WDR43Q15061 677 aaKnown RBP eCLIP7.54□□□□□ -1.2
VARS-222ENST00000470953 NFE2L2Q16236 605 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 GRIK5Q16478 980 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 CCL14Q16627 93 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 BMP8AQ7Z5Y6 402 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 PBXIP1Q96AQ6 731 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 MYD88Q99836 296 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 CERS4Q9HA82 394 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 TACC3Q9Y6A5 838 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 SPTBN2O15020 2390 aa7.54□□□□□ -1.2
VARS-222ENST00000470953 TAF5LO75529 589 aa7.53□□□□□ -1.2
VARS-222ENST00000470953 IL1R1P14778 569 aa7.53□□□□□ -1.2
VARS-222ENST00000470953 ZKSCAN1P17029 563 aaPredicted RBP7.53□□□□□ -1.2
VARS-222ENST00000470953 FKBP1AP62942 108 aaKnown RBP7.53□□□□□ -1.2
VARS-222ENST00000470953 CHRNDQ07001 517 aa7.53□□□□□ -1.2
VARS-222ENST00000470953 FAM110CQ1W6H9 321 aa7.53□□□□□ -1.2
VARS-222ENST00000470953 LEXMQ3ZCV2 418 aa7.53□□□□□ -1.2
VARS-222ENST00000470953 PTCRAQ6ISU1 281 aaPredicted RBP7.53□□□□□ -1.2
VARS-222ENST00000470953 GADL1Q6ZQY3 521 aa7.53□□□□□ -1.2
VARS-222ENST00000470953 SUGP1Q8IWZ8 645 aaKnown RBP7.53□□□□□ -1.2
VARS-222ENST00000470953 LPAR1Q92633 364 aa7.53□□□□□ -1.2
VARS-222ENST00000470953 IRF2BPLQ9H1B7 796 aa7.53□□□□□ -1.2
VARS-222ENST00000470953 PHAXQ9H814 394 aaKnown RBP7.53□□□□□ -1.2
VARS-222ENST00000470953 UBE2ZQ9H832 354 aaPredicted RBP7.53□□□□□ -1.2
VARS-222ENST00000470953 MUTYHQ9UIF7 546 aa7.53□□□□□ -1.2
VARS-222ENST00000470953 TTF2Q9UNY4 1162 aaKnown RBP7.53□□□□□ -1.2
VARS-222ENST00000470953 TMEM221A6NGB7 291 aa7.52□□□□□ -1.21
VARS-222ENST00000470953 M0R296 226 aa7.52□□□□□ -1.21
VARS-222ENST00000470953 NBL1P41271 181 aa7.52□□□□□ -1.21
VARS-222ENST00000470953 CRKP46108 304 aa7.52□□□□□ -1.21
VARS-222ENST00000470953 PUM1Q14671 1186 aaKnown RBP eCLIP7.52□□□□□ -1.21
VARS-222ENST00000470953 HDGFL1Q5TGJ6 251 aa7.52□□□□□ -1.21
VARS-222ENST00000470953 CCDC191Q8NCU4 936 aa7.52□□□□□ -1.21
VARS-222ENST00000470953 FERMT2Q96AC1 680 aa7.52□□□□□ -1.21
VARS-222ENST00000470953 CWC25Q9NXE8 425 aaPredicted RBP7.52□□□□□ -1.21
VARS-222ENST00000470953 DDX20Q9UHI6 824 aaKnown RBP7.52□□□□□ -1.21
VARS-222ENST00000470953 SERPINA10Q9UK55 444 aa7.52□□□□□ -1.21
VARS-222ENST00000470953 A0A0G2JLL6 359 aaPredicted RBP7.51□□□□□ -1.21
VARS-222ENST00000470953 GRXCR2A6NFK2 248 aa7.51□□□□□ -1.21
VARS-222ENST00000470953 ACRP10323 421 aa7.51□□□□□ -1.21
VARS-222ENST00000470953 XRCC5P13010 732 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms