RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 CLASRPQ8N2M8 674 aaKnown RBP16.7■□□□□ 0.26
ABCA4-204ENST00000470771 CYP7A1P22680 504 aa16.69■□□□□ 0.26
ABCA4-204ENST00000470771 CAP2P40123 477 aa16.69■□□□□ 0.26
ABCA4-204ENST00000470771 PABPC4Q13310 644 aaKnown RBP eCLIP16.69■□□□□ 0.26
ABCA4-204ENST00000470771 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
ABCA4-204ENST00000470771 GPAT2Q6NUI2 795 aa16.69■□□□□ 0.26
ABCA4-204ENST00000470771 CRACR2BQ8N4Y2 399 aaPredicted RBP16.69■□□□□ 0.26
ABCA4-204ENST00000470771 SMCR8Q8TEV9 937 aaPredicted RBP16.69■□□□□ 0.26
ABCA4-204ENST00000470771 TGFBRAP1Q8WUH2 860 aa16.69■□□□□ 0.26
ABCA4-204ENST00000470771 KIF1BPQ96EK5 621 aa16.69■□□□□ 0.26
ABCA4-204ENST00000470771 AS3MTQ9HBK9 375 aa16.69■□□□□ 0.26
ABCA4-204ENST00000470771 PNMA3Q9UL41 463 aa16.69■□□□□ 0.26
ABCA4-204ENST00000470771 PTCH2Q9Y6C5 1203 aa16.69■□□□□ 0.26
ABCA4-204ENST00000470771 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
ABCA4-204ENST00000470771 RAB11FIP3O75154 756 aa16.68■□□□□ 0.26
ABCA4-204ENST00000470771 HLA-DOAP06340 250 aa16.68■□□□□ 0.26
ABCA4-204ENST00000470771 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
ABCA4-204ENST00000470771 FCGRTP55899 365 aa16.68■□□□□ 0.26
ABCA4-204ENST00000470771 SLC4A8Q2Y0W8 1093 aa16.68■□□□□ 0.26
ABCA4-204ENST00000470771 MAPKAPK5Q8IW41 473 aa16.68■□□□□ 0.26
ABCA4-204ENST00000470771 ZNF280CQ8ND82 737 aa16.68■□□□□ 0.26
ABCA4-204ENST00000470771 RAET1EQ8TD07 263 aa16.68■□□□□ 0.26
ABCA4-204ENST00000470771 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
ABCA4-204ENST00000470771 ZBTB40Q9NUA8 1239 aa16.68■□□□□ 0.26
ABCA4-204ENST00000470771 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
ABCA4-204ENST00000470771 COG6Q9Y2V7 657 aa16.68■□□□□ 0.26
ABCA4-204ENST00000470771 ASNSP08243 561 aa16.67■□□□□ 0.26
ABCA4-204ENST00000470771 CYP2C8P10632 490 aa16.67■□□□□ 0.26
ABCA4-204ENST00000470771 SPP2Q13103 211 aa16.67■□□□□ 0.26
ABCA4-204ENST00000470771 PROCA1Q8NCQ7 364 aaPredicted RBP16.67■□□□□ 0.26
ABCA4-204ENST00000470771 RHPN1Q8TCX5 695 aa16.67■□□□□ 0.26
ABCA4-204ENST00000470771 ZNF333Q96JL9 665 aa16.67■□□□□ 0.26
ABCA4-204ENST00000470771 GINM1Q9NU53 330 aa16.67■□□□□ 0.26
ABCA4-204ENST00000470771 SRRDQ9UH36 339 aa16.67■□□□□ 0.26
ABCA4-204ENST00000470771 AGTPBP1Q9UPW5 1226 aa16.67■□□□□ 0.26
ABCA4-204ENST00000470771 FAM196BA6NMK8 535 aa16.66■□□□□ 0.26
ABCA4-204ENST00000470771 USP5P45974 858 aa16.66■□□□□ 0.26
ABCA4-204ENST00000470771 MAGEB6Q8N7X4 407 aa16.66■□□□□ 0.26
ABCA4-204ENST00000470771 TRIM47Q96LD4 638 aa16.66■□□□□ 0.26
ABCA4-204ENST00000470771 ARHGAP39Q9C0H5 1083 aa16.66■□□□□ 0.26
ABCA4-204ENST00000470771 IL1RAPL2Q9NP60 686 aa16.66■□□□□ 0.26
ABCA4-204ENST00000470771 DOCK2Q92608 1830 aa16.66■□□□□ 0.26
ABCA4-204ENST00000470771 APBB1O00213 710 aa16.65■□□□□ 0.26
ABCA4-204ENST00000470771 ECM2O94769 699 aaPredicted RBP16.65■□□□□ 0.26
ABCA4-204ENST00000470771 SLURP2P0DP57 97 aa16.65■□□□□ 0.26
ABCA4-204ENST00000470771 OSBPP22059 807 aa16.65■□□□□ 0.26
ABCA4-204ENST00000470771 CAP1Q01518 475 aa16.65■□□□□ 0.26
ABCA4-204ENST00000470771 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
ABCA4-204ENST00000470771 PRPF38BQ5VTL8 546 aaKnown RBP16.65■□□□□ 0.26
ABCA4-204ENST00000470771 ADGRA1Q86SQ6 560 aa16.65■□□□□ 0.26
ABCA4-204ENST00000470771 BIN2Q9UBW5 565 aaPredicted RBP16.65■□□□□ 0.26
ABCA4-204ENST00000470771 PALD1Q9ULE6 856 aa16.65■□□□□ 0.26
ABCA4-204ENST00000470771 FLT1P17948 1338 aa16.65■□□□□ 0.26
ABCA4-204ENST00000470771 MKI67P46013 3256 aaKnown RBP16.65■□□□□ 0.26
ABCA4-204ENST00000470771 POTEFA5A3E0 1075 aa16.64■□□□□ 0.25
ABCA4-204ENST00000470771 BCRP11274 1271 aa16.64■□□□□ 0.25
ABCA4-204ENST00000470771 TTC6Q86TZ1 520 aa16.64■□□□□ 0.25
ABCA4-204ENST00000470771 SH3TC2Q8TF17 1288 aa16.64■□□□□ 0.25
ABCA4-204ENST00000470771 WDR18Q9BV38 432 aa16.64■□□□□ 0.25
ABCA4-204ENST00000470771 TMOD4Q9NZQ9 345 aa16.64■□□□□ 0.25
ABCA4-204ENST00000470771 SAP30BPQ9UHR5 308 aaKnown RBP16.64■□□□□ 0.25
ABCA4-204ENST00000470771 ADGRA2Q96PE1 1338 aa16.64■□□□□ 0.25
ABCA4-204ENST00000470771 EN2P19622 333 aaPredicted RBP16.63■□□□□ 0.25
ABCA4-204ENST00000470771 GRK4P32298 578 aa16.63■□□□□ 0.25
ABCA4-204ENST00000470771 GCLCP48506 637 aaPredicted RBP16.63■□□□□ 0.25
ABCA4-204ENST00000470771 DYNLL1P63167 89 aaKnown RBP16.63■□□□□ 0.25
ABCA4-204ENST00000470771 METTL16Q86W50 562 aaKnown RBP16.63■□□□□ 0.25
ABCA4-204ENST00000470771 MIGA1Q8NAN2 632 aa16.63■□□□□ 0.25
ABCA4-204ENST00000470771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.63■□□□□ 0.25
ABCA4-204ENST00000470771 BCL11AQ9H165 835 aa16.63■□□□□ 0.25
ABCA4-204ENST00000470771 MYPNQ86TC9 1320 aa16.63■□□□□ 0.25
ABCA4-204ENST00000470771 KIAA0100Q14667 2235 aaKnown RBP16.62■□□□□ 0.25
ABCA4-204ENST00000470771 C19orf81C9J6K1 198 aa16.62■□□□□ 0.25
ABCA4-204ENST00000470771 HMGCS2P54868 508 aa16.62■□□□□ 0.25
ABCA4-204ENST00000470771 UBXN2AP68543 259 aa16.62■□□□□ 0.25
ABCA4-204ENST00000470771 SLC9C2Q5TAH2 1124 aa16.62■□□□□ 0.25
ABCA4-204ENST00000470771 CCDC84Q86UT8 332 aaPredicted RBP16.62■□□□□ 0.25
ABCA4-204ENST00000470771 COA7Q96BR5 231 aa16.62■□□□□ 0.25
ABCA4-204ENST00000470771 MAGEB6P1A0A0J9YX57 407 aa16.61■□□□□ 0.25
ABCA4-204ENST00000470771 TNPO2O14787 897 aaKnown RBP16.61■□□□□ 0.25
ABCA4-204ENST00000470771 MYCP01106 439 aaPredicted RBP16.61■□□□□ 0.25
ABCA4-204ENST00000470771 BACE1P56817 501 aa16.61■□□□□ 0.25
ABCA4-204ENST00000470771 SH3D19Q5HYK7 790 aa16.61■□□□□ 0.25
ABCA4-204ENST00000470771 TREML2Q5T2D2 321 aa16.61■□□□□ 0.25
ABCA4-204ENST00000470771 NKX2-3Q8TAU0 364 aa16.61■□□□□ 0.25
ABCA4-204ENST00000470771 ANTXR1Q9H6X2 564 aa16.61■□□□□ 0.25
ABCA4-204ENST00000470771 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
ABCA4-204ENST00000470771 SERPINB13Q9UIV8 391 aa16.61■□□□□ 0.25
ABCA4-204ENST00000470771 NDUFB9Q9Y6M9 179 aa16.61■□□□□ 0.25
ABCA4-204ENST00000470771 BRCA2P51587 3418 aa16.61■□□□□ 0.25
ABCA4-204ENST00000470771 USP17L10C9JJH3 530 aa16.6■□□□□ 0.25
ABCA4-204ENST00000470771 GOLIM4O00461 696 aa16.6■□□□□ 0.25
ABCA4-204ENST00000470771 CTGFP29279 349 aa16.6■□□□□ 0.25
ABCA4-204ENST00000470771 IRX3P78415 501 aaPredicted RBP16.6■□□□□ 0.25
ABCA4-204ENST00000470771 SIRT2Q8IXJ6 389 aa16.6■□□□□ 0.25
ABCA4-204ENST00000470771 ANKRD13CQ8N6S4 541 aa16.6■□□□□ 0.25
ABCA4-204ENST00000470771 SLAIN1Q8ND83 568 aa16.6■□□□□ 0.25
ABCA4-204ENST00000470771 DNAJC2Q99543 621 aaKnown RBP16.6■□□□□ 0.25
ABCA4-204ENST00000470771 CRNKL1Q9BZJ0 848 aaKnown RBP16.6■□□□□ 0.25
ABCA4-204ENST00000470771 DOCK1Q14185 1865 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms