RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 TATDN2Q93075 761 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 ZDHHC15Q96MV8 337 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 ZNF341Q9BYN7 854 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 RNF40O75150 1001 aa11.12□□□□□ -0.63
XRN1-208ENST00000470537 ALDH1L1O75891 902 aa11.12□□□□□ -0.63
XRN1-208ENST00000470537 BEND3Q5T5X7 828 aa11.12□□□□□ -0.63
XRN1-208ENST00000470537 SLC17A8Q8NDX2 589 aa11.12□□□□□ -0.63
XRN1-208ENST00000470537 RNF208Q9H0X6 261 aa11.12□□□□□ -0.63
XRN1-208ENST00000470537 WDR70Q9NW82 654 aa11.12□□□□□ -0.63
XRN1-208ENST00000470537 RIPOR2Q9Y4F9 1068 aa11.12□□□□□ -0.63
XRN1-208ENST00000470537 TRIOBPQ9H2D6 2365 aa11.11□□□□□ -0.63
XRN1-208ENST00000470537 C3orf80F5H4A9 247 aa11.11□□□□□ -0.63
XRN1-208ENST00000470537 PDHXO00330 501 aa11.11□□□□□ -0.63
XRN1-208ENST00000470537 FCGRTP55899 365 aa11.11□□□□□ -0.63
XRN1-208ENST00000470537 CAP1Q01518 475 aa11.11□□□□□ -0.63
XRN1-208ENST00000470537 HHIPL2Q6UWX4 724 aa11.11□□□□□ -0.63
XRN1-208ENST00000470537 FBXO33Q7Z6M2 555 aa11.11□□□□□ -0.63
XRN1-208ENST00000470537 ZKSCAN4Q969J2 545 aaPredicted RBP11.11□□□□□ -0.63
XRN1-208ENST00000470537 ZNF594Q96JF6 807 aaPredicted RBP11.11□□□□□ -0.63
XRN1-208ENST00000470537 PARK7Q99497 189 aaKnown RBP11.11□□□□□ -0.63
XRN1-208ENST00000470537 MTRQ99707 1265 aa11.11□□□□□ -0.63
XRN1-208ENST00000470537 RBM27Q9P2N5 1060 aaKnown RBP11.11□□□□□ -0.63
XRN1-208ENST00000470537 SNCAIPQ9Y6H5 919 aa11.11□□□□□ -0.63
XRN1-208ENST00000470537 AOX1Q06278 1338 aa11.1□□□□□ -0.63
XRN1-208ENST00000470537 VAMP4O75379 141 aa11.1□□□□□ -0.63
XRN1-208ENST00000470537 CCL5P13501 91 aa11.1□□□□□ -0.63
XRN1-208ENST00000470537 ZEB1P37275 1124 aaPredicted RBP11.1□□□□□ -0.63
XRN1-208ENST00000470537 CHAF1AQ13111 956 aaPredicted RBP11.1□□□□□ -0.63
XRN1-208ENST00000470537 FASTKD5Q7L8L6 764 aaKnown RBP11.1□□□□□ -0.63
XRN1-208ENST00000470537 WDR63Q8IWG1 891 aa11.1□□□□□ -0.63
XRN1-208ENST00000470537 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.1□□□□□ -0.63
XRN1-208ENST00000470537 ARHGAP39Q9C0H5 1083 aa11.1□□□□□ -0.63
XRN1-208ENST00000470537 SRCIN1Q9C0H9 1055 aa11.1□□□□□ -0.63
XRN1-208ENST00000470537 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
XRN1-208ENST00000470537 A0A0C4DFX4 3053 aa11.1□□□□□ -0.63
XRN1-208ENST00000470537 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 RPAP1Q9BWH6 1393 aaPredicted RBP11.09□□□□□ -0.63
XRN1-208ENST00000470537 DLL1O00548 723 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 CXCL11O14625 94 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 PDE8BO95263 885 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 IFIT1P09914 478 aaKnown RBP11.09□□□□□ -0.63
XRN1-208ENST00000470537 OSBPP22059 807 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 MTFR1Q15390 333 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 METTL24Q5JXM2 366 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 WDR66Q8TBY9 1149 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 FAM151AQ8WW52 585 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 IL21Q9HBE4 155 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 CPA4Q9UI42 421 aa11.09□□□□□ -0.63
XRN1-208ENST00000470537 F6X3S4 739 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 GFRA3O60609 400 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 FARP2O94887 1054 aaPredicted RBP11.08□□□□□ -0.64
XRN1-208ENST00000470537 SGPL1O95470 568 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 TFRCP02786 760 aaKnown RBP11.08□□□□□ -0.64
XRN1-208ENST00000470537 APOBEC3HQ6NTF7 200 aaKnown RBP11.08□□□□□ -0.64
XRN1-208ENST00000470537 SLC4A10Q6U841 1118 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 NUDT18Q6ZVK8 323 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 MIGA2Q7L4E1 593 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 PRKD2Q9BZL6 878 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 KCNH4Q9UQ05 1017 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 SZT2Q5T011 3432 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 OTOFQ9HC10 1997 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 KIF16BQ96L93 1317 aa11.08□□□□□ -0.64
XRN1-208ENST00000470537 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
XRN1-208ENST00000470537 CACNB3P54284 484 aa11.07□□□□□ -0.64
XRN1-208ENST00000470537 EPHA10Q5JZY3 1008 aa11.07□□□□□ -0.64
XRN1-208ENST00000470537 UBE2Q1Q7Z7E8 422 aa11.07□□□□□ -0.64
XRN1-208ENST00000470537 PXYLP1Q8TE99 480 aa11.07□□□□□ -0.64
XRN1-208ENST00000470537 U2AF1L4Q8WU68 220 aaKnown RBP11.07□□□□□ -0.64
XRN1-208ENST00000470537 PICK1Q9NRD5 415 aa11.07□□□□□ -0.64
XRN1-208ENST00000470537 GNL3LQ9NVN8 582 aaKnown RBP11.07□□□□□ -0.64
XRN1-208ENST00000470537 ZNF112Q9UJU3 913 aa11.07□□□□□ -0.64
XRN1-208ENST00000470537 IQSEC3Q9UPP2 1182 aaPredicted RBP11.07□□□□□ -0.64
XRN1-208ENST00000470537 FANCIQ9NVI1 1328 aa11.07□□□□□ -0.64
XRN1-208ENST00000470537 ARAP2Q8WZ64 1704 aa11.06□□□□□ -0.64
XRN1-208ENST00000470537 ZBTB7BO15156 539 aaPredicted RBP11.06□□□□□ -0.64
XRN1-208ENST00000470537 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
XRN1-208ENST00000470537 PUM3Q15397 648 aaKnown RBP11.06□□□□□ -0.64
XRN1-208ENST00000470537 NOL9Q5SY16 702 aaKnown RBP11.06□□□□□ -0.64
XRN1-208ENST00000470537 SHISA4Q96DD7 197 aa11.06□□□□□ -0.64
XRN1-208ENST00000470537 SLC45A1Q9Y2W3 748 aa11.06□□□□□ -0.64
XRN1-208ENST00000470537 ADCY3O60266 1144 aa11.05□□□□□ -0.64
XRN1-208ENST00000470537 SLC5A1P13866 664 aa11.05□□□□□ -0.64
XRN1-208ENST00000470537 INPP5BP32019 993 aa11.05□□□□□ -0.64
XRN1-208ENST00000470537 PRKCZQ05513 592 aa11.05□□□□□ -0.64
XRN1-208ENST00000470537 IRF5Q13568 498 aa11.05□□□□□ -0.64
XRN1-208ENST00000470537 PPP1R18Q6NYC8 613 aa11.05□□□□□ -0.64
XRN1-208ENST00000470537 NECAB2Q7Z6G3 386 aa11.05□□□□□ -0.64
XRN1-208ENST00000470537 SMCR8Q8TEV9 937 aaPredicted RBP11.05□□□□□ -0.64
XRN1-208ENST00000470537 COA7Q96BR5 231 aa11.05□□□□□ -0.64
XRN1-208ENST00000470537 PUS3Q9BZE2 481 aaKnown RBP11.05□□□□□ -0.64
XRN1-208ENST00000470537 PRO3102Q9H379 93 aa11.05□□□□□ -0.64
XRN1-208ENST00000470537 A0A1B0GUL6 1792 aa11.04□□□□□ -0.64
XRN1-208ENST00000470537 TNPO2O14787 897 aaKnown RBP11.04□□□□□ -0.64
XRN1-208ENST00000470537 BCRP11274 1271 aa11.04□□□□□ -0.64
XRN1-208ENST00000470537 TCP10Q12799 353 aa11.04□□□□□ -0.64
XRN1-208ENST00000470537 RABL6Q3YEC7 729 aaPredicted RBP11.04□□□□□ -0.64
XRN1-208ENST00000470537 SLF2Q8IX21 1173 aa11.04□□□□□ -0.64
XRN1-208ENST00000470537 ZGPATQ8N5A5 531 aaKnown RBP11.04□□□□□ -0.64
XRN1-208ENST00000470537 ANKLE1Q8NAG6 615 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms