RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 ZKSCAN1P17029 563 aaPredicted RBP15.06■□□□□ 0
LSM2-209ENST00000470083 TJAP1Q5JTD0 557 aa15.06■□□□□ 0
LSM2-209ENST00000470083 TTYH1Q9H313 450 aaPredicted RBP15.06■□□□□ 0
LSM2-209ENST00000470083 BICC1Q9H694 974 aaKnown RBP15.06■□□□□ 0
LSM2-209ENST00000470083 PTPRFP10586 1907 aa15.05■□□□□ 0
LSM2-209ENST00000470083 NBPF7P0C2Y1 421 aaPredicted RBP15.05■□□□□ -0
LSM2-209ENST00000470083 CCND3P30281 292 aaPredicted RBP15.05■□□□□ -0
LSM2-209ENST00000470083 PLA2G5P39877 138 aa15.05■□□□□ -0
LSM2-209ENST00000470083 HMGCS2P54868 508 aa15.05■□□□□ -0
LSM2-209ENST00000470083 SMAD3P84022 425 aaKnown RBP15.05■□□□□ -0
LSM2-209ENST00000470083 SPP2Q13103 211 aa15.05■□□□□ -0
LSM2-209ENST00000470083 ZNF280CQ8ND82 737 aa15.05■□□□□ -0
LSM2-209ENST00000470083 TBC1D2Q9BYX2 928 aa15.05■□□□□ -0
LSM2-209ENST00000470083 SRCIN1Q9C0H9 1055 aa15.05■□□□□ -0
LSM2-209ENST00000470083 PRKAG2Q9UGJ0 569 aa15.05■□□□□ -0
LSM2-209ENST00000470083 UTYO14607 1347 aa15.04■□□□□ -0
LSM2-209ENST00000470083 GAKO14976 1311 aa15.04■□□□□ -0
LSM2-209ENST00000470083 SALL1Q9NSC2 1324 aa15.04■□□□□ -0
LSM2-209ENST00000470083 FANCIQ9NVI1 1328 aa15.04■□□□□ -0
LSM2-209ENST00000470083 TBC1D12O60347 775 aa15.04■□□□□ -0
LSM2-209ENST00000470083 SLC5A1P13866 664 aa15.04■□□□□ -0
LSM2-209ENST00000470083 SHHQ15465 462 aa15.04■□□□□ -0
LSM2-209ENST00000470083 ANKRD44Q8N8A2 993 aa15.04■□□□□ -0
LSM2-209ENST00000470083 LPIN2Q92539 896 aa15.04■□□□□ -0
LSM2-209ENST00000470083 SENP6Q9GZR1 1112 aaPredicted RBP15.04■□□□□ -0
LSM2-209ENST00000470083 RAPGEFL1Q9UHV5 662 aa15.04■□□□□ -0
LSM2-209ENST00000470083 AK9Q5TCS8 1911 aa15.04■□□□□ -0
LSM2-209ENST00000470083 PDE3AQ14432 1141 aa15.03■□□□□ -0
LSM2-209ENST00000470083 SLC4A10Q6U841 1118 aa15.03■□□□□ -0
LSM2-209ENST00000470083 KLHDC4Q8TBB5 520 aa15.03■□□□□ -0
LSM2-209ENST00000470083 USP6NLQ92738 828 aa15.03■□□□□ -0
LSM2-209ENST00000470083 DDX4Q9NQI0 724 aaKnown RBP15.03■□□□□ -0
LSM2-209ENST00000470083 DOCK1Q14185 1865 aa15.03■□□□□ -0
LSM2-209ENST00000470083 DOCK2Q92608 1830 aa15.03■□□□□ -0
LSM2-209ENST00000470083 PHIPQ8WWQ0 1821 aa15.02■□□□□ -0
LSM2-209ENST00000470083 TMEM265A0A087WTH1 108 aa15.02■□□□□ -0
LSM2-209ENST00000470083 MAPK4P31152 587 aa15.02■□□□□ -0
LSM2-209ENST00000470083 RGS2P41220 211 aa15.02■□□□□ -0
LSM2-209ENST00000470083 IRX3P78415 501 aaPredicted RBP15.02■□□□□ -0
LSM2-209ENST00000470083 SH3D19Q5HYK7 790 aa15.02■□□□□ -0
LSM2-209ENST00000470083 C9orf50Q5SZB4 431 aa15.02■□□□□ -0
LSM2-209ENST00000470083 GPRC5AQ8NFJ5 357 aa15.02■□□□□ -0
LSM2-209ENST00000470083 APBA2Q99767 749 aa15.02■□□□□ -0
LSM2-209ENST00000470083 OSBPL5Q9H0X9 879 aaPredicted RBP15.02■□□□□ -0
LSM2-209ENST00000470083 ATN1P54259 1190 aaPredicted RBP15.01□□□□□ -0.01
LSM2-209ENST00000470083 PICALMQ13492 652 aa15.01□□□□□ -0.01
LSM2-209ENST00000470083 CCL14Q16627 93 aa15.01□□□□□ -0.01
LSM2-209ENST00000470083 FAM122AQ96E09 287 aa15.01□□□□□ -0.01
LSM2-209ENST00000470083 TXNRD2Q9NNW7 524 aa15.01□□□□□ -0.01
LSM2-209ENST00000470083 GNL3LQ9NVN8 582 aaKnown RBP15.01□□□□□ -0.01
LSM2-209ENST00000470083 PLXNB2O15031 1838 aa15.01□□□□□ -0.01
LSM2-209ENST00000470083 LOC285556D6RIA3 1793 aa15.01□□□□□ -0.01
LSM2-209ENST00000470083 CACNA1FO60840 1977 aa15□□□□□ -0.01
LSM2-209ENST00000470083 USP17L5A8MUK1 530 aa15□□□□□ -0.01
LSM2-209ENST00000470083 HOXA7P31268 230 aaPredicted RBP15□□□□□ -0.01
LSM2-209ENST00000470083 RTP1P59025 263 aa15□□□□□ -0.01
LSM2-209ENST00000470083 DDX10Q13206 875 aaKnown RBP15□□□□□ -0.01
LSM2-209ENST00000470083 MORN1Q5T089 497 aa15□□□□□ -0.01
LSM2-209ENST00000470083 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
LSM2-209ENST00000470083 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15□□□□□ -0.01
LSM2-209ENST00000470083 DENND2AQ9ULE3 1009 aa15□□□□□ -0.01
LSM2-209ENST00000470083 MAST2Q6P0Q8 1798 aa14.99□□□□□ -0.01
LSM2-209ENST00000470083 FAM196BA6NMK8 535 aa14.99□□□□□ -0.01
LSM2-209ENST00000470083 DNM1LO00429 736 aa14.99□□□□□ -0.01
LSM2-209ENST00000470083 SEMA3EO15041 775 aa14.99□□□□□ -0.01
LSM2-209ENST00000470083 MSCO60682 206 aa14.99□□□□□ -0.01
LSM2-209ENST00000470083 PEX10O60683 326 aa14.99□□□□□ -0.01
LSM2-209ENST00000470083 NPM3O75607 178 aaKnown RBP14.99□□□□□ -0.01
LSM2-209ENST00000470083 HERVK_113P62684 666 aa14.99□□□□□ -0.01
LSM2-209ENST00000470083 EXOSC9Q06265 439 aaKnown RBP14.99□□□□□ -0.01
LSM2-209ENST00000470083 GPR142Q7Z601 462 aa14.99□□□□□ -0.01
LSM2-209ENST00000470083 SLF2Q8IX21 1173 aa14.99□□□□□ -0.01
LSM2-209ENST00000470083 ZGPATQ8N5A5 531 aaKnown RBP14.99□□□□□ -0.01
LSM2-209ENST00000470083 USP38Q8NB14 1042 aa14.99□□□□□ -0.01
LSM2-209ENST00000470083 P2RX7Q99572 595 aaKnown RBP14.99□□□□□ -0.01
LSM2-209ENST00000470083 PRKRIP1Q9H875 184 aaPredicted RBP14.99□□□□□ -0.01
LSM2-209ENST00000470083 EYA2O00167 538 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 ZBTB22O15209 634 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 CAP2P40123 477 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 BTDP43251 543 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 ERVK-9P63128 1117 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 ERVK-24P63145 666 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 PLEKHH3Q7Z736 793 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 DZIP1Q86YF9 867 aaKnown RBP14.98□□□□□ -0.01
LSM2-209ENST00000470083 CCAR1Q8IX12 1150 aaKnown RBP14.98□□□□□ -0.01
LSM2-209ENST00000470083 LPAR1Q92633 364 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 PORCNQ9H237 461 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 AS3MTQ9HBK9 375 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 RBPJLQ9UBG7 517 aa14.98□□□□□ -0.01
LSM2-209ENST00000470083 DDX20Q9UHI6 824 aaKnown RBP14.98□□□□□ -0.01
LSM2-209ENST00000470083 MTMR2Q13614 643 aa14.97□□□□□ -0.01
LSM2-209ENST00000470083 MFSD14CQ5VZR4 134 aa14.97□□□□□ -0.01
LSM2-209ENST00000470083 GTF3C2Q8WUA4 911 aaPredicted RBP14.97□□□□□ -0.01
LSM2-209ENST00000470083 BADQ92934 168 aa14.97□□□□□ -0.01
LSM2-209ENST00000470083 WDR18Q9BV38 432 aa14.97□□□□□ -0.01
LSM2-209ENST00000470083 TMOD4Q9NZQ9 345 aa14.97□□□□□ -0.01
LSM2-209ENST00000470083 ATP11BQ9Y2G3 1177 aa14.97□□□□□ -0.01
LSM2-209ENST00000470083 PHKA1P46020 1223 aa14.96□□□□□ -0.01
LSM2-209ENST00000470083 BACE1P56817 501 aa14.96□□□□□ -0.01
LSM2-209ENST00000470083 RHBDL3P58872 404 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms