RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RILPL1Q5EBL4 403 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 ISM2Q6H9L7 571 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 MFSD6Q6ZSS7 791 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 FCHSD1Q86WN1 690 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 CNNM3Q8NE01 707 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 BCL9LQ86UU0 1499 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 WNK3Q9BYP7 1800 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 COL14A1Q05707 1796 aaKnown RBP15.7■□□□□ 0.1
BRCA1-209ENST00000470026 RTN1Q16799 776 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 KMT5BQ4FZB7 885 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 OLFM4Q6UX06 510 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 DIS3L2Q8IYB7 885 aaKnown RBP15.7■□□□□ 0.1
BRCA1-209ENST00000470026 TMTC2Q8N394 836 aa15.7■□□□□ 0.1
BRCA1-209ENST00000470026 NOL10Q9BSC4 688 aaKnown RBP15.7■□□□□ 0.1
BRCA1-209ENST00000470026 PHLPP1O60346 1717 aa15.69■□□□□ 0.1
BRCA1-209ENST00000470026 DEXIO95424 95 aa15.69■□□□□ 0.1
BRCA1-209ENST00000470026 TBX2Q13207 712 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-209ENST00000470026 SUSD4Q5VX71 490 aa15.69■□□□□ 0.1
BRCA1-209ENST00000470026 LCORLQ8N3X6 602 aa15.69■□□□□ 0.1
BRCA1-209ENST00000470026 CRACR2BQ8N4Y2 399 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-209ENST00000470026 INTS13Q9NVM9 706 aa15.69■□□□□ 0.1
BRCA1-209ENST00000470026 PHLPP2Q6ZVD8 1323 aa15.69■□□□□ 0.1
BRCA1-209ENST00000470026 PRKAB2O43741 272 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 ZNF18P17022 549 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 ETF1P62495 437 aaKnown RBP15.68■□□□□ 0.1
BRCA1-209ENST00000470026 PDE4BQ07343 736 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 WTAPQ15007 396 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 SAFBQ15424 915 aaKnown RBP eCLIP15.68■□□□□ 0.1
BRCA1-209ENST00000470026 TMEM139Q8IV31 216 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 TRIM22Q8IYM9 498 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 NACAP1Q9BZK3 213 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 FANCLQ9NW38 375 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 BTG4Q9NY30 223 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 HOOK1Q9UJC3 728 aaKnown RBP15.68■□□□□ 0.1
BRCA1-209ENST00000470026 CICQ96RK0 1608 aaPredicted RBP15.68■□□□□ 0.1
BRCA1-209ENST00000470026 CCDC196A0A1B0GTZ2 297 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 SERPINC1P01008 464 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 SART3Q15020 963 aaKnown RBP15.68■□□□□ 0.1
BRCA1-209ENST00000470026 TRIM65Q6PJ69 517 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 SYT10Q6XYQ8 523 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 TRIML1Q8N9V2 468 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 SPATA20Q8TB22 786 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 ANAPC4Q9UJX5 808 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 MAN1B1Q9UKM7 699 aa15.68■□□□□ 0.1
BRCA1-209ENST00000470026 SRPRBQ9Y5M8 271 aaKnown RBP15.68■□□□□ 0.1
BRCA1-209ENST00000470026 FOXN1O15353 648 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 MORC3Q14149 939 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 POSTNQ15063 836 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 PPP2R5BQ15173 497 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 MLKLQ8NB16 471 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 ENOX1Q8TC92 643 aaKnown RBP15.67■□□□□ 0.1
BRCA1-209ENST00000470026 RNF41Q9H4P4 317 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-209ENST00000470026 SLC4A4Q9Y6R1 1079 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 GRIN1Q05586 938 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 SEC23AQ15436 765 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 ELF2Q15723 593 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 CFAP100Q494V2 611 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 INTS5Q6P9B9 1019 aaKnown RBP15.67■□□□□ 0.1
BRCA1-209ENST00000470026 FBXO38Q6PIJ6 1188 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 REXO1L1PQ8IX06 675 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 MPHOSPH8Q99549 860 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 KCNJ14Q9UNX9 436 aa15.67■□□□□ 0.1
BRCA1-209ENST00000470026 DOT1LQ8TEK3 1739 aa15.66■□□□□ 0.1
BRCA1-209ENST00000470026 TMEM232C9JQI7 657 aa15.66■□□□□ 0.1
BRCA1-209ENST00000470026 SNAP23O00161 211 aa15.66■□□□□ 0.1
BRCA1-209ENST00000470026 TOP1P11387 765 aaKnown RBP15.66■□□□□ 0.1
BRCA1-209ENST00000470026 H2AFXP16104 143 aaPredicted RBP15.66■□□□□ 0.1
BRCA1-209ENST00000470026 TDO2P48775 406 aa15.66■□□□□ 0.1
BRCA1-209ENST00000470026 ZNF654Q8IZM8 581 aa15.66■□□□□ 0.1
BRCA1-209ENST00000470026 FANCBQ8NB91 859 aa15.66■□□□□ 0.1
BRCA1-209ENST00000470026 UTP14AQ9BVJ6 771 aaKnown RBP15.66■□□□□ 0.1
BRCA1-209ENST00000470026 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
BRCA1-209ENST00000470026 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.66■□□□□ 0.17e-6■■□□□ 12.1
BRCA1-209ENST00000470026 ACTN4O43707 911 aaKnown RBP15.65■□□□□ 0.1
BRCA1-209ENST00000470026 BCAMP50895 628 aa15.65■□□□□ 0.1
BRCA1-209ENST00000470026 PARP10Q53GL7 1025 aa15.65■□□□□ 0.1
BRCA1-209ENST00000470026 RNF26Q9BY78 433 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-209ENST00000470026 ZNF804BA4D1E1 1349 aa15.65■□□□□ 0.1
BRCA1-209ENST00000470026 ARHGAP6O43182 974 aa15.65■□□□□ 0.1
BRCA1-209ENST00000470026 GABPB1Q06547 395 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-209ENST00000470026 PPARAQ07869 468 aa15.65■□□□□ 0.1
BRCA1-209ENST00000470026 CT47A1Q5JQC4 288 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-209ENST00000470026 KANK3Q6NY19 840 aa15.65■□□□□ 0.1
BRCA1-209ENST00000470026 SERTAD1Q9UHV2 236 aa15.65■□□□□ 0.1
BRCA1-209ENST00000470026 DACH1Q9UI36 760 aa15.65■□□□□ 0.1
BRCA1-209ENST00000470026 CEP131Q9UPN4 1083 aa15.65■□□□□ 0.1
BRCA1-209ENST00000470026 PCDHB6Q9Y5E3 794 aa15.65■□□□□ 0.1
BRCA1-209ENST00000470026 ZNF335Q9H4Z2 1342 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-209ENST00000470026 ERICH2A1L162 156 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 CAMTA2O94983 1202 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 FMR1Q06787 632 aaKnown RBP eCLIP15.64■□□□□ 0.09
BRCA1-209ENST00000470026 CCDC152Q4G0S7 254 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 SHISA4Q96DD7 197 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 MED15Q96RN5 788 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.64■□□□□ 0.09
BRCA1-209ENST00000470026 V9GYY5 206 aaPredicted RBP15.64■□□□□ 0.09
BRCA1-209ENST00000470026 MYH6P13533 1939 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 A0A1B0GUL6 1792 aa15.64■□□□□ 0.09
BRCA1-209ENST00000470026 DLEC1Q9Y238 1755 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms