RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 CSF1RP07333 972 aa14.33□□□□□ -0.12
COMMD2-202ENST00000469896 NEUROD2Q15784 382 aa14.33□□□□□ -0.12
COMMD2-202ENST00000469896 ALYREFQ86V81 257 aaKnown RBP14.33□□□□□ -0.12
COMMD2-202ENST00000469896 VPS37DQ86XT2 251 aa14.33□□□□□ -0.12
COMMD2-202ENST00000469896 SCYL3Q8IZE3 742 aa14.33□□□□□ -0.12
COMMD2-202ENST00000469896 SOCS4Q8WXH5 440 aa14.33□□□□□ -0.12
COMMD2-202ENST00000469896 MRIQ9BWK5 157 aa14.33□□□□□ -0.12
COMMD2-202ENST00000469896 PI4KAP2A4QPH2 592 aa14.32□□□□□ -0.12
COMMD2-202ENST00000469896 PLIN1O60240 522 aa14.32□□□□□ -0.12
COMMD2-202ENST00000469896 XRCC5P13010 732 aaKnown RBP14.32□□□□□ -0.12
COMMD2-202ENST00000469896 ZKSCAN1P17029 563 aaPredicted RBP14.32□□□□□ -0.12
COMMD2-202ENST00000469896 CYP2B6P20813 491 aa14.32□□□□□ -0.12
COMMD2-202ENST00000469896 CWF19L2Q2TBE0 894 aaKnown RBP14.32□□□□□ -0.12
COMMD2-202ENST00000469896 AKNAD1Q5T1N1 836 aa14.32□□□□□ -0.12
COMMD2-202ENST00000469896 APOBEC3HQ6NTF7 200 aaKnown RBP14.32□□□□□ -0.12
COMMD2-202ENST00000469896 PI4KAP1Q8N8J0 262 aa14.32□□□□□ -0.12
COMMD2-202ENST00000469896 RNPC3Q96LT9 517 aaKnown RBP14.32□□□□□ -0.12
COMMD2-202ENST00000469896 LRFN3Q9BTN0 628 aa14.32□□□□□ -0.12
COMMD2-202ENST00000469896 PRDM5Q9NQX1 630 aaPredicted RBP14.32□□□□□ -0.12
COMMD2-202ENST00000469896 AFG3L2Q9Y4W6 797 aa14.32□□□□□ -0.12
COMMD2-202ENST00000469896 FRAT2O75474 233 aaPredicted RBP14.31□□□□□ -0.12
COMMD2-202ENST00000469896 PTPRAP18433 802 aa14.31□□□□□ -0.12
COMMD2-202ENST00000469896 GYG1P46976 350 aa14.31□□□□□ -0.12
COMMD2-202ENST00000469896 PABPC4Q13310 644 aaKnown RBP eCLIP14.31□□□□□ -0.12
COMMD2-202ENST00000469896 PDE3AQ14432 1141 aa14.31□□□□□ -0.12
COMMD2-202ENST00000469896 TMEM31Q5JXX7 168 aa14.31□□□□□ -0.12
COMMD2-202ENST00000469896 NUDT12Q9BQG2 462 aa14.31□□□□□ -0.12
COMMD2-202ENST00000469896 TRIM75PA6NK02 468 aa14.3□□□□□ -0.12
COMMD2-202ENST00000469896 RTP1P59025 263 aa14.3□□□□□ -0.12
COMMD2-202ENST00000469896 CACNB2Q08289 660 aaPredicted RBP14.3□□□□□ -0.12
COMMD2-202ENST00000469896 TCP10Q12799 353 aa14.3□□□□□ -0.12
COMMD2-202ENST00000469896 CHAF1AQ13111 956 aaPredicted RBP14.3□□□□□ -0.12
COMMD2-202ENST00000469896 TAF7LQ5H9L4 462 aa14.3□□□□□ -0.12
COMMD2-202ENST00000469896 BADQ92934 168 aa14.3□□□□□ -0.12
COMMD2-202ENST00000469896 ZNF576Q9H609 170 aa14.3□□□□□ -0.12
COMMD2-202ENST00000469896 CNNM1Q9NRU3 951 aa14.3□□□□□ -0.12
COMMD2-202ENST00000469896 ATP11BQ9Y2G3 1177 aa14.3□□□□□ -0.12
COMMD2-202ENST00000469896 CHMP3Q9Y3E7 222 aa14.3□□□□□ -0.12
COMMD2-202ENST00000469896 DNAJB2P25686 324 aa14.29□□□□□ -0.12
COMMD2-202ENST00000469896 UBE4AQ14139 1066 aa14.29□□□□□ -0.12
COMMD2-202ENST00000469896 CCDC30Q5VVM6 783 aa14.29□□□□□ -0.12
COMMD2-202ENST00000469896 HHIPL2Q6UWX4 724 aa14.29□□□□□ -0.12
COMMD2-202ENST00000469896 LDHAL6AQ6ZMR3 332 aa14.29□□□□□ -0.12
COMMD2-202ENST00000469896 FAM84BQ96KN1 310 aaPredicted RBP14.29□□□□□ -0.12
COMMD2-202ENST00000469896 MYH16Q9H6N6 1097 aa14.29□□□□□ -0.12
COMMD2-202ENST00000469896 SUGT1Q9Y2Z0 365 aa14.29□□□□□ -0.12
COMMD2-202ENST00000469896 DOCK3Q8IZD9 2030 aa14.29□□□□□ -0.12
COMMD2-202ENST00000469896 CCND3P30281 292 aaPredicted RBP14.28□□□□□ -0.12
COMMD2-202ENST00000469896 GCKRQ14397 625 aa14.28□□□□□ -0.12
COMMD2-202ENST00000469896 GRIK5Q16478 980 aa14.28□□□□□ -0.12
COMMD2-202ENST00000469896 PROCA1Q8NCQ7 364 aaPredicted RBP14.28□□□□□ -0.12
COMMD2-202ENST00000469896 P2RX7Q99572 595 aaKnown RBP14.28□□□□□ -0.12
COMMD2-202ENST00000469896 MBIPQ9NS73 344 aa14.28□□□□□ -0.12
COMMD2-202ENST00000469896 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
COMMD2-202ENST00000469896 MAST2Q6P0Q8 1798 aa14.27□□□□□ -0.12
COMMD2-202ENST00000469896 DNM1LO00429 736 aa14.27□□□□□ -0.13
COMMD2-202ENST00000469896 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.13
COMMD2-202ENST00000469896 MSCO60682 206 aa14.27□□□□□ -0.13
COMMD2-202ENST00000469896 AAK1Q2M2I8 961 aa14.27□□□□□ -0.13
COMMD2-202ENST00000469896 TREML2Q5T2D2 321 aa14.27□□□□□ -0.13
COMMD2-202ENST00000469896 POTEEQ6S8J3 1075 aa14.27□□□□□ -0.13
COMMD2-202ENST00000469896 TIFAQ96CG3 184 aa14.27□□□□□ -0.13
COMMD2-202ENST00000469896 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.26□□□□□ -0.13
COMMD2-202ENST00000469896 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.26□□□□□ -0.13
COMMD2-202ENST00000469896 PHF20L1A8MW92 1017 aa14.26□□□□□ -0.13
COMMD2-202ENST00000469896 RGS2P41220 211 aa14.26□□□□□ -0.13
COMMD2-202ENST00000469896 CCDC57Q2TAC2 916 aa14.26□□□□□ -0.13
COMMD2-202ENST00000469896 CCAR1Q8IX12 1150 aaKnown RBP14.26□□□□□ -0.13
COMMD2-202ENST00000469896 LTBP2Q14767 1821 aa14.25□□□□□ -0.13
COMMD2-202ENST00000469896 CTNND1O60716 968 aaKnown RBP14.25□□□□□ -0.13
COMMD2-202ENST00000469896 CAVIN4Q5BKX8 364 aa14.25□□□□□ -0.13
COMMD2-202ENST00000469896 LPAR1Q92633 364 aa14.25□□□□□ -0.13
COMMD2-202ENST00000469896 NECAB3Q96P71 396 aaPredicted RBP14.25□□□□□ -0.13
COMMD2-202ENST00000469896 IQSEC3Q9UPP2 1182 aaPredicted RBP14.25□□□□□ -0.13
COMMD2-202ENST00000469896 MAPK4P31152 587 aa14.24□□□□□ -0.13
COMMD2-202ENST00000469896 CASP7P55210 303 aa14.24□□□□□ -0.13
COMMD2-202ENST00000469896 CCDC85BQ15834 202 aaPredicted RBP14.24□□□□□ -0.13
COMMD2-202ENST00000469896 APBA2Q99767 749 aa14.24□□□□□ -0.13
COMMD2-202ENST00000469896 STK31Q9BXU1 1019 aa14.24□□□□□ -0.13
COMMD2-202ENST00000469896 CXXC1Q9P0U4 656 aaPredicted RBP14.24□□□□□ -0.13
COMMD2-202ENST00000469896 MORF4L1Q9UBU8 362 aa14.24□□□□□ -0.13
COMMD2-202ENST00000469896 DDX20Q9UHI6 824 aaKnown RBP14.24□□□□□ -0.13
COMMD2-202ENST00000469896 MRE11P49959 708 aa14.23□□□□□ -0.13
COMMD2-202ENST00000469896 NFIAQ12857 509 aa14.23□□□□□ -0.13
COMMD2-202ENST00000469896 MFSD14CQ5VZR4 134 aa14.23□□□□□ -0.13
COMMD2-202ENST00000469896 CDC42EP5Q6NZY7 148 aa14.23□□□□□ -0.13
COMMD2-202ENST00000469896 MARVELD3Q96A59 401 aa14.23□□□□□ -0.13
COMMD2-202ENST00000469896 ASCC2Q9H1I8 757 aaPredicted RBP14.23□□□□□ -0.13
COMMD2-202ENST00000469896 EPHX3Q9H6B9 360 aa14.23□□□□□ -0.13
COMMD2-202ENST00000469896 PDLIM7Q9NR12 457 aa14.23□□□□□ -0.13
COMMD2-202ENST00000469896 MYBBP1AQ9BQG0 1328 aaKnown RBP14.22□□□□□ -0.13
COMMD2-202ENST00000469896 GPR37L1O60883 481 aa14.22□□□□□ -0.13
COMMD2-202ENST00000469896 BMP1P13497 986 aa14.22□□□□□ -0.13
COMMD2-202ENST00000469896 HOXB3P14651 431 aaPredicted RBP14.22□□□□□ -0.13
COMMD2-202ENST00000469896 IGFBP4P22692 258 aa14.22□□□□□ -0.13
COMMD2-202ENST00000469896 SLC39A5Q6ZMH5 540 aa14.22□□□□□ -0.13
COMMD2-202ENST00000469896 FBXO33Q7Z6M2 555 aa14.22□□□□□ -0.13
COMMD2-202ENST00000469896 ZSCAN29Q8IWY8 852 aaPredicted RBP14.22□□□□□ -0.13
COMMD2-202ENST00000469896 ARRDC4Q8NCT1 418 aa14.22□□□□□ -0.13
COMMD2-202ENST00000469896 FBXO22Q8NEZ5 403 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms