RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 ZNF654Q8IZM8 581 aa16.97■□□□□ 0.31
LIMS2-213ENST00000469300 CENPHQ9H3R5 247 aa16.97■□□□□ 0.31
LIMS2-213ENST00000469300 AGLP35573 1532 aa16.97■□□□□ 0.31
LIMS2-213ENST00000469300 SMTNP53814 917 aa16.97■□□□□ 0.31
LIMS2-213ENST00000469300 SNW1Q13573 536 aaKnown RBP16.97■□□□□ 0.31
LIMS2-213ENST00000469300 NDUFB9Q9Y6M9 179 aa16.97■□□□□ 0.31
LIMS2-213ENST00000469300 ADRA2BP18089 450 aa16.97■□□□□ 0.31
LIMS2-213ENST00000469300 KRT40Q6A162 431 aa16.97■□□□□ 0.31
LIMS2-213ENST00000469300 TMED8Q6PL24 325 aaPredicted RBP16.97■□□□□ 0.31
LIMS2-213ENST00000469300 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.97■□□□□ 0.31
LIMS2-213ENST00000469300 CYP27B1O15528 508 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 GSTTP1A0A1W2PQM5 241 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 HSPD1P10809 573 aaKnown RBP16.96■□□□□ 0.31
LIMS2-213ENST00000469300 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
LIMS2-213ENST00000469300 NCOA5Q9HCD5 579 aaKnown RBP16.96■□□□□ 0.31
LIMS2-213ENST00000469300 PABPC4Q13310 644 aaKnown RBP eCLIP16.96■□□□□ 0.31
LIMS2-213ENST00000469300 CNNM4Q6P4Q7 775 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 REXO1Q8N1G1 1221 aaKnown RBP16.96■□□□□ 0.31
LIMS2-213ENST00000469300 PRIMPOLQ96LW4 560 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 SETBP1Q9Y6X0 1596 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 PTCH1Q13635 1447 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 KRT83P78385 493 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 GPR162Q16538 588 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 MSANTD4Q8NCY6 345 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 CTNNBL1Q8WYA6 563 aaPredicted RBP16.96■□□□□ 0.31
LIMS2-213ENST00000469300 FAM107BQ9H098 131 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 MMRN2Q9H8L6 949 aa16.96■□□□□ 0.31
LIMS2-213ENST00000469300 MACROD2A1Z1Q3 448 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 ACTN2P35609 894 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 ZNF830Q96NB3 372 aaPredicted RBP16.95■□□□□ 0.3
LIMS2-213ENST00000469300 SYNCQ9H7C4 482 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 TRMT1Q9NXH9 659 aaKnown RBP16.95■□□□□ 0.3
LIMS2-213ENST00000469300 KCNH3Q9ULD8 1083 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 MED14O60244 1454 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 OVOS2A0A0G2JMS6 1433 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 OVOS2A0A0J9YW53 1432 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 OVOS2Q6IE36 1432 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 PHKA1P46020 1223 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 BTDP43251 543 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 GALNT17Q6IS24 598 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 GPATCH11Q8N954 259 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 LMBR1Q8WVP7 490 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 EDC3Q96F86 508 aaKnown RBP16.95■□□□□ 0.3
LIMS2-213ENST00000469300 TRERF1Q96PN7 1200 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 ZSCAN10Q96SZ4 725 aaPredicted RBP16.95■□□□□ 0.3
LIMS2-213ENST00000469300 TRPM1Q7Z4N2 1603 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 A0A0D9SFI3 127 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 MYL5Q02045 173 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 NEK11Q8NG66 645 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 DYDC1Q8WWB3 177 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 ZNF408Q9H9D4 720 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 INCENPQ9NQS7 918 aa16.95■□□□□ 0.3
LIMS2-213ENST00000469300 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
LIMS2-213ENST00000469300 TAX1BP1Q86VP1 789 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 KIAA0825Q8IV33 1275 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 CDC42BPBQ9Y5S2 1711 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 DDX12PQ92771 950 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 IFT74Q96LB3 600 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 CCNT1O60563 726 aaKnown RBP16.94■□□□□ 0.3
LIMS2-213ENST00000469300 ZYXQ15942 572 aaKnown RBP16.94■□□□□ 0.3
LIMS2-213ENST00000469300 CCDC102AQ96A19 550 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 LRWD1Q9UFC0 647 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 EXOC7Q9UPT5 735 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 SPDYE4A6NLX3 237 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 GTF3C6Q969F1 213 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 SLC5A4Q9NY91 659 aa16.94■□□□□ 0.3
LIMS2-213ENST00000469300 GOLGA6L10A0A0M3HER8 536 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 CKAP4Q07065 602 aaKnown RBP16.93■□□□□ 0.3
LIMS2-213ENST00000469300 ZMYM1Q5SVZ6 1142 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 SWAP70Q9UH65 585 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 FRMD4BQ9Y2L6 1034 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 ARHGEF35A5YM69 484 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 DDAH1O94760 285 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 GSPT1P15170 499 aaKnown RBP16.93■□□□□ 0.3
LIMS2-213ENST00000469300 GNG11P61952 73 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 NSMFQ6X4W1 530 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 ZBTB21Q9ULJ3 1066 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 LAMC1P11047 1609 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 NPR1P16066 1061 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 CERKLQ49MI3 558 aaPredicted RBP16.93■□□□□ 0.3
LIMS2-213ENST00000469300 GPHNQ9NQX3 736 aaPredicted RBP16.93■□□□□ 0.3
LIMS2-213ENST00000469300 FGAP02671 866 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 DOK7Q18PE1 504 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 ERFEQ4G0M1 354 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 PUS3Q9BZE2 481 aaKnown RBP16.93■□□□□ 0.3
LIMS2-213ENST00000469300 CEP83Q9Y592 693 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 PAXBP1Q9Y5B6 917 aa16.93■□□□□ 0.3
LIMS2-213ENST00000469300 A0A1B0GVL5 298 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 H7C1W4 665 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 NOP56O00567 594 aaKnown RBP16.92■□□□□ 0.3
LIMS2-213ENST00000469300 SULF1Q8IWU6 871 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 CPXCR1Q8N123 301 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 C16orf45Q96MC5 204 aaPredicted RBP16.92■□□□□ 0.3
LIMS2-213ENST00000469300 ZSWIM6Q9HCJ5 1215 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 AFF2P51816 1311 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 JCADQ9P266 1359 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 TACC1O75410 805 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 CCDC93Q567U6 631 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 ARHGAP27Q6ZUM4 889 aa16.92■□□□□ 0.3
LIMS2-213ENST00000469300 SKILP12757 684 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms