RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 DOCK2Q92608 1830 aa15.73■□□□□ 0.11
CLRN1-204ENST00000468836 CCDC85CA6NKD9 419 aa15.72■□□□□ 0.11
CLRN1-204ENST00000468836 PHF20L1A8MW92 1017 aa15.72■□□□□ 0.11
CLRN1-204ENST00000468836 PTPRAP18433 802 aa15.72■□□□□ 0.11
CLRN1-204ENST00000468836 MAP3K10Q02779 954 aa15.72■□□□□ 0.11
CLRN1-204ENST00000468836 AAMPQ13685 434 aa15.72■□□□□ 0.11
CLRN1-204ENST00000468836 SLC4A8Q2Y0W8 1093 aa15.72■□□□□ 0.11
CLRN1-204ENST00000468836 FAM43AQ8N2R8 423 aa15.72■□□□□ 0.11
CLRN1-204ENST00000468836 EDC3Q96F86 508 aaKnown RBP15.72■□□□□ 0.11
CLRN1-204ENST00000468836 ERO1AQ96HE7 468 aa15.72■□□□□ 0.11
CLRN1-204ENST00000468836 PALD1Q9ULE6 856 aa15.72■□□□□ 0.11
CLRN1-204ENST00000468836 AK9Q5TCS8 1911 aa15.72■□□□□ 0.11
CLRN1-204ENST00000468836 BTBD19C9JJ37 291 aa15.71■□□□□ 0.11
CLRN1-204ENST00000468836 CXCL11O14625 94 aa15.71■□□□□ 0.11
CLRN1-204ENST00000468836 ERC2O15083 957 aa15.71■□□□□ 0.11
CLRN1-204ENST00000468836 SLC34A2O95436 690 aa15.71■□□□□ 0.11
CLRN1-204ENST00000468836 PKN2Q16513 984 aaKnown RBP15.71■□□□□ 0.11
CLRN1-204ENST00000468836 DDRGK1Q96HY6 314 aa15.71■□□□□ 0.11
CLRN1-204ENST00000468836 ZCCHC17Q9NP64 241 aaKnown RBP15.71■□□□□ 0.11
CLRN1-204ENST00000468836 KCNH4Q9UQ05 1017 aa15.71■□□□□ 0.11
CLRN1-204ENST00000468836 TRIM75PA6NK02 468 aa15.7■□□□□ 0.1
CLRN1-204ENST00000468836 POLR3DP05423 398 aaPredicted RBP15.7■□□□□ 0.1
CLRN1-204ENST00000468836 SLURP2P0DP57 97 aa15.7■□□□□ 0.1
CLRN1-204ENST00000468836 SP3Q02447 781 aa15.7■□□□□ 0.1
CLRN1-204ENST00000468836 ARHGEF6Q15052 776 aa15.7■□□□□ 0.1
CLRN1-204ENST00000468836 GADL1Q6ZQY3 521 aa15.7■□□□□ 0.1
CLRN1-204ENST00000468836 FASTKD5Q7L8L6 764 aaKnown RBP15.7■□□□□ 0.1
CLRN1-204ENST00000468836 ANKRD23Q86SG2 305 aa15.7■□□□□ 0.1
CLRN1-204ENST00000468836 TTC6Q86TZ1 520 aa15.7■□□□□ 0.1
CLRN1-204ENST00000468836 FOXP4Q8IVH2 680 aaPredicted RBP15.7■□□□□ 0.1
CLRN1-204ENST00000468836 TBC1D2Q9BYX2 928 aa15.7■□□□□ 0.1
CLRN1-204ENST00000468836 R3HDMLQ9H3Y0 253 aa15.7■□□□□ 0.1
CLRN1-204ENST00000468836 AS3MTQ9HBK9 375 aa15.7■□□□□ 0.1
CLRN1-204ENST00000468836 PDHXO00330 501 aa15.69■□□□□ 0.1
CLRN1-204ENST00000468836 ADD2P35612 726 aa15.69■□□□□ 0.1
CLRN1-204ENST00000468836 CAP2P40123 477 aa15.69■□□□□ 0.1
CLRN1-204ENST00000468836 KIF22Q14807 665 aa15.69■□□□□ 0.1
CLRN1-204ENST00000468836 LRRFIP1Q32MZ4 808 aaKnown RBP15.69■□□□□ 0.1
CLRN1-204ENST00000468836 AMOTL1Q8IY63 956 aa15.69■□□□□ 0.1
CLRN1-204ENST00000468836 GCC1Q96CN9 775 aa15.69■□□□□ 0.1
CLRN1-204ENST00000468836 PARK7Q99497 189 aaKnown RBP15.69■□□□□ 0.1
CLRN1-204ENST00000468836 TRIM17Q9Y577 477 aa15.69■□□□□ 0.1
CLRN1-204ENST00000468836 USP17L5A8MUK1 530 aa15.68■□□□□ 0.1
CLRN1-204ENST00000468836 ASNSP08243 561 aa15.68■□□□□ 0.1
CLRN1-204ENST00000468836 ANKRD45Q5TZF3 282 aa15.68■□□□□ 0.1
CLRN1-204ENST00000468836 TSHZ3Q63HK5 1081 aa15.68■□□□□ 0.1
CLRN1-204ENST00000468836 CD99L2Q8TCZ2 262 aa15.68■□□□□ 0.1
CLRN1-204ENST00000468836 RIOK1Q9BRS2 568 aaKnown RBP15.68■□□□□ 0.1
CLRN1-204ENST00000468836 ARMT1Q9H993 441 aa15.68■□□□□ 0.1
CLRN1-204ENST00000468836 MCM9Q9NXL9 1143 aa15.68■□□□□ 0.1
CLRN1-204ENST00000468836 TTC41PQ6P2S7 1318 aa15.68■□□□□ 0.1
CLRN1-204ENST00000468836 A0A0G2JLL6 359 aaPredicted RBP15.67■□□□□ 0.1
CLRN1-204ENST00000468836 TLR2O60603 784 aa15.67■□□□□ 0.1
CLRN1-204ENST00000468836 MBD4O95243 580 aa15.67■□□□□ 0.1
CLRN1-204ENST00000468836 GDF11O95390 407 aa15.67■□□□□ 0.1
CLRN1-204ENST00000468836 HDAC1Q13547 482 aaPredicted RBP15.67■□□□□ 0.1
CLRN1-204ENST00000468836 PRRT2Q7Z6L0 340 aaPredicted RBP15.67■□□□□ 0.1
CLRN1-204ENST00000468836 CCDC84Q86UT8 332 aaPredicted RBP15.67■□□□□ 0.1
CLRN1-204ENST00000468836 LCORLQ8N3X6 602 aa15.67■□□□□ 0.1
CLRN1-204ENST00000468836 ZNF280CQ8ND82 737 aa15.67■□□□□ 0.1
CLRN1-204ENST00000468836 RWDD1Q9H446 243 aaPredicted RBP15.67■□□□□ 0.1
CLRN1-204ENST00000468836 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.67■□□□□ 0.1
CLRN1-204ENST00000468836 SERPINB13Q9UIV8 391 aa15.67■□□□□ 0.1
CLRN1-204ENST00000468836 AFG3L2Q9Y4W6 797 aa15.67■□□□□ 0.1
CLRN1-204ENST00000468836 CASP8AP2Q9UKL3 1982 aa15.66■□□□□ 0.1
CLRN1-204ENST00000468836 TCRBV5S4A2TA0A5A2 114 aa15.66■□□□□ 0.1
CLRN1-204ENST00000468836 GLRX3O76003 335 aaKnown RBP15.66■□□□□ 0.1
CLRN1-204ENST00000468836 MX1P20591 662 aa15.66■□□□□ 0.1
CLRN1-204ENST00000468836 UBE3CQ15386 1083 aa15.66■□□□□ 0.1
CLRN1-204ENST00000468836 SDR42E1Q8WUS8 393 aa15.66■□□□□ 0.1
CLRN1-204ENST00000468836 EHD4Q9H223 541 aa15.66■□□□□ 0.1
CLRN1-204ENST00000468836 EFCC1Q9HA90 598 aa15.66■□□□□ 0.1
CLRN1-204ENST00000468836 GINM1Q9NU53 330 aa15.66■□□□□ 0.1
CLRN1-204ENST00000468836 SUPT16HQ9Y5B9 1047 aaKnown RBP15.66■□□□□ 0.1
CLRN1-204ENST00000468836 SPP2Q13103 211 aa15.65■□□□□ 0.1
CLRN1-204ENST00000468836 PABPC4Q13310 644 aaKnown RBP eCLIP15.65■□□□□ 0.1
CLRN1-204ENST00000468836 FBXO46Q6PJ61 603 aaPredicted RBP15.65■□□□□ 0.1
CLRN1-204ENST00000468836 KBTBD3Q8NAB2 608 aa15.65■□□□□ 0.1
CLRN1-204ENST00000468836 SMCR8Q8TEV9 937 aaPredicted RBP15.65■□□□□ 0.1
CLRN1-204ENST00000468836 CABP5Q9NP86 173 aa15.65■□□□□ 0.1
CLRN1-204ENST00000468836 TMOD4Q9NZQ9 345 aa15.65■□□□□ 0.1
CLRN1-204ENST00000468836 PNMA3Q9UL41 463 aa15.65■□□□□ 0.1
CLRN1-204ENST00000468836 ZFYP08048 801 aaPredicted RBP15.64■□□□□ 0.09
CLRN1-204ENST00000468836 OTOP1Q7RTM1 612 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 METTL16Q86W50 562 aaKnown RBP15.64■□□□□ 0.09
CLRN1-204ENST00000468836 EXOC6Q8TAG9 804 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 FEZ1Q99689 392 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 FSD1Q9BTV5 496 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 DNAJC18Q9H819 358 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 ATP8A2Q9NTI2 1148 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 CPA4Q9UI42 421 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 ZBTB21Q9ULJ3 1066 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 AGTPBP1Q9UPW5 1226 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 HPS5Q9UPZ3 1129 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 SLC4A4Q9Y6R1 1079 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 LAMB1P07942 1786 aa15.64■□□□□ 0.09
CLRN1-204ENST00000468836 DOCK1Q14185 1865 aa15.63■□□□□ 0.09
CLRN1-204ENST00000468836 HMGCS2P54868 508 aa15.63■□□□□ 0.09
CLRN1-204ENST00000468836 SLFNL1Q499Z3 407 aa15.63■□□□□ 0.09
CLRN1-204ENST00000468836 CERKLQ49MI3 558 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms