RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 IFIT3O14879 490 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 CBFA2T2O43439 604 aa18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 ALX1Q15699 326 aa18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 METTL16Q86W50 562 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 CNNM3Q8NE01 707 aa18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 UTP14AQ9BVJ6 771 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 NAPBQ9H115 298 aa18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 ZSWIM5Q9P217 1185 aa18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 CFAP100Q494V2 611 aa18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 IFNL3Q8IZI9 196 aa18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 KCNH3Q9ULD8 1083 aa18.16■□□□□ 0.5
TSPAN4-211ENST00000468468 KRBA2Q6ZNG9 492 aa18.15■□□□□ 0.5
TSPAN4-211ENST00000468468 SMIM5Q71RC9 77 aa18.15■□□□□ 0.5
TSPAN4-211ENST00000468468 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-211ENST00000468468 LIFRP42702 1097 aa18.15■□□□□ 0.5
TSPAN4-211ENST00000468468 PUM3Q15397 648 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-211ENST00000468468 FOXP4Q8IVH2 680 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-211ENST00000468468 LPIN2Q92539 896 aa18.15■□□□□ 0.5
TSPAN4-211ENST00000468468 PCDHA5Q9Y5H7 936 aa18.15■□□□□ 0.5
TSPAN4-211ENST00000468468 MORC2Q9Y6X9 1032 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-211ENST00000468468 MBD4O95243 580 aa18.14■□□□□ 0.5
TSPAN4-211ENST00000468468 HOMER1Q86YM7 354 aa18.14■□□□□ 0.5
TSPAN4-211ENST00000468468 MAGEB6Q8N7X4 407 aa18.14■□□□□ 0.5
TSPAN4-211ENST00000468468 SPATA5Q8NB90 893 aa18.14■□□□□ 0.5
TSPAN4-211ENST00000468468 L2HGDHQ9H9P8 463 aa18.14■□□□□ 0.5
TSPAN4-211ENST00000468468 BCL9LQ86UU0 1499 aa18.14■□□□□ 0.49
TSPAN4-211ENST00000468468 NPHP1O15259 732 aa18.14■□□□□ 0.49
TSPAN4-211ENST00000468468 FMNL1O95466 1100 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-211ENST00000468468 KRI1Q8N9T8 703 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-211ENST00000468468 SMARCC1Q92922 1105 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-211ENST00000468468 TACC3Q9Y6A5 838 aa18.14■□□□□ 0.49
TSPAN4-211ENST00000468468 STK36Q9NRP7 1315 aa18.14■□□□□ 0.49
TSPAN4-211ENST00000468468 SPECC1Q5M775 1068 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 FBXO38Q6PIJ6 1188 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 LINC00116Q8NCU8 138 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 ARMT1Q9H993 441 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 FANCLQ9NW38 375 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 BTBD18B2RXH4 712 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 NTSR2O95665 410 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 MAP3K12Q12852 859 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 NOSTRINQ8IVI9 506 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 WASF1Q92558 559 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 FOXN1O15353 648 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 TUBB4AP04350 444 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 FGFR2P21802 821 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 GUCY1A2P33402 732 aa18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 RRP12Q5JTH9 1297 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-211ENST00000468468 ECM29Q5VYK3 1845 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 CCP110O43303 1012 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 IFNAR1P17181 557 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 SAFBQ15424 915 aaKnown RBP eCLIP18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 VPS72Q15906 364 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 PARP10Q53GL7 1025 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 AKNAD1Q5T1N1 836 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 FAM182BQ5T319 152 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 VSTM4Q8IW00 320 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 CNNM2Q9H8M5 875 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 TOMM22Q9NS69 142 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 MROH5Q6ZUA9 1318 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 TMEM232C9JQI7 657 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 TOP1P11387 765 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 SLC5A1P13866 664 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 PDE4BQ07343 736 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 PTPN21Q16825 1174 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 CCDC93Q567U6 631 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 MFSD6Q6ZSS7 791 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 STK11IPQ8N1F8 1099 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 MPHOSPH8Q99549 860 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 KRT23Q9C075 422 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 KCNJ14Q9UNX9 436 aa18.12■□□□□ 0.49
TSPAN4-211ENST00000468468 MMP1P03956 469 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 GOLGA8FQ08AF8 430 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 GOLGA8DPQ0D2H9 430 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 RASGRF1Q13972 1273 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 DIS3L2Q8IYB7 885 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 AK7Q96M32 723 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 ZKSCAN3Q9BRR0 538 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 RREB1Q92766 1687 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 GSG1L2A8MUP6 293 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 PRKAB2O43741 272 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 MYO1BO43795 1136 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 BMP6P22004 513 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 TOB1P50616 345 aaPredicted RBP18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 ETF1P62495 437 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 ERCC6LQ2NKX8 1250 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 DNAI1Q9UI46 699 aa18.11■□□□□ 0.49
TSPAN4-211ENST00000468468 MDM2Q00987 491 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-211ENST00000468468 TRIM22Q8IYM9 498 aa18.1■□□□□ 0.49
TSPAN4-211ENST00000468468 CCDC82Q8N4S0 544 aa18.1■□□□□ 0.49
TSPAN4-211ENST00000468468 LRRN4CLQ8ND94 238 aa18.1■□□□□ 0.49
TSPAN4-211ENST00000468468 HOOK1Q9UJC3 728 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-211ENST00000468468 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.1■□□□□ 0.49
TSPAN4-211ENST00000468468 RTN1Q16799 776 aa18.1■□□□□ 0.49
TSPAN4-211ENST00000468468 LRP5O75197 1615 aa18.1■□□□□ 0.49
TSPAN4-211ENST00000468468 TDO2P48775 406 aa18.09■□□□□ 0.49
TSPAN4-211ENST00000468468 GRIN1Q05586 938 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms