RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PPP4CP60510 307 aa13.62□□□□□ -0.23
COL4A6-205ENST00000468338 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
COL4A6-205ENST00000468338 MAP3K10Q02779 954 aa13.62□□□□□ -0.23
COL4A6-205ENST00000468338 WNK4Q96J92 1243 aa13.62□□□□□ -0.23
COL4A6-205ENST00000468338 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
COL4A6-205ENST00000468338 RNF186Q9NXI6 227 aa13.62□□□□□ -0.23
COL4A6-205ENST00000468338 RAI14Q9P0K7 980 aa13.62□□□□□ -0.23
COL4A6-205ENST00000468338 ZNF112Q9UJU3 913 aa13.62□□□□□ -0.23
COL4A6-205ENST00000468338 PCDHB15Q9Y5E8 787 aa13.62□□□□□ -0.23
COL4A6-205ENST00000468338 AK9Q5TCS8 1911 aa13.62□□□□□ -0.23
COL4A6-205ENST00000468338 MAST2Q6P0Q8 1798 aa13.61□□□□□ -0.23
COL4A6-205ENST00000468338 GJA5P36382 358 aa13.61□□□□□ -0.23
COL4A6-205ENST00000468338 RGS3P49796 1198 aa13.61□□□□□ -0.23
COL4A6-205ENST00000468338 ATN1P54259 1190 aaPredicted RBP13.61□□□□□ -0.23
COL4A6-205ENST00000468338 TCP10Q12799 353 aa13.61□□□□□ -0.23
COL4A6-205ENST00000468338 DCAF15Q66K64 600 aa13.61□□□□□ -0.23
COL4A6-205ENST00000468338 TMED8Q6PL24 325 aaPredicted RBP13.61□□□□□ -0.23
COL4A6-205ENST00000468338 SH3BP5LQ7L8J4 393 aa13.61□□□□□ -0.23
COL4A6-205ENST00000468338 DDX4Q9NQI0 724 aaKnown RBP13.61□□□□□ -0.23
COL4A6-205ENST00000468338 PIH1D3Q9NQM4 214 aaKnown RBP13.61□□□□□ -0.23
COL4A6-205ENST00000468338 CASP8AP2Q9UKL3 1982 aa13.61□□□□□ -0.23
COL4A6-205ENST00000468338 DOCK2Q92608 1830 aa13.6□□□□□ -0.23
COL4A6-205ENST00000468338 MANSC4A6NHS7 340 aaPredicted RBP13.6□□□□□ -0.23
COL4A6-205ENST00000468338 INHBEP58166 350 aa13.6□□□□□ -0.23
COL4A6-205ENST00000468338 VGLL4Q14135 290 aa13.6□□□□□ -0.23
COL4A6-205ENST00000468338 NAA16Q6N069 864 aaPredicted RBP13.6□□□□□ -0.23
COL4A6-205ENST00000468338 ADGRA1Q86SQ6 560 aa13.6□□□□□ -0.23
COL4A6-205ENST00000468338 CFHR5Q9BXR6 569 aa13.6□□□□□ -0.23
COL4A6-205ENST00000468338 ANTXR1Q9H6X2 564 aa13.6□□□□□ -0.23
COL4A6-205ENST00000468338 TSKSQ9UJT2 592 aa13.6□□□□□ -0.23
COL4A6-205ENST00000468338 APBB1O00213 710 aa13.59□□□□□ -0.23
COL4A6-205ENST00000468338 GPR37O15354 613 aa13.59□□□□□ -0.23
COL4A6-205ENST00000468338 TRPA1O75762 1119 aa13.59□□□□□ -0.23
COL4A6-205ENST00000468338 IFIT2P09913 472 aaKnown RBP13.59□□□□□ -0.23
COL4A6-205ENST00000468338 SREBF2Q12772 1141 aa13.59□□□□□ -0.23
COL4A6-205ENST00000468338 MIGA2Q7L4E1 593 aa13.59□□□□□ -0.23
COL4A6-205ENST00000468338 ZNF341Q9BYN7 854 aa13.59□□□□□ -0.23
COL4A6-205ENST00000468338 LRRCC1Q9C099 1032 aa13.59□□□□□ -0.23
COL4A6-205ENST00000468338 SNCAIPQ9Y6H5 919 aa13.59□□□□□ -0.23
COL4A6-205ENST00000468338 NDUFB9Q9Y6M9 179 aa13.59□□□□□ -0.23
COL4A6-205ENST00000468338 COL2A1P02458 1487 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-205ENST00000468338 DDTLA6NHG4 134 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-205ENST00000468338 SPDYE5A6NIY4 337 aa13.58□□□□□ -0.24
COL4A6-205ENST00000468338 ATP5JP18859 108 aa13.58□□□□□ -0.24
COL4A6-205ENST00000468338 MAP2K5Q13163 448 aa13.58□□□□□ -0.24
COL4A6-205ENST00000468338 NOM1Q5C9Z4 860 aaKnown RBP13.58□□□□□ -0.24
COL4A6-205ENST00000468338 OPTNQ96CV9 577 aa13.58□□□□□ -0.24
COL4A6-205ENST00000468338 WRNIP1Q96S55 665 aa13.58□□□□□ -0.24
COL4A6-205ENST00000468338 CRBNQ96SW2 442 aa13.58□□□□□ -0.24
COL4A6-205ENST00000468338 ELP3Q9H9T3 547 aa13.58□□□□□ -0.24
COL4A6-205ENST00000468338 CSADQ9Y600 493 aa13.58□□□□□ -0.24
COL4A6-205ENST00000468338 CDK5RAP2Q96SN8 1893 aa13.58□□□□□ -0.24
COL4A6-205ENST00000468338 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
COL4A6-205ENST00000468338 TBC1D12O60347 775 aa13.57□□□□□ -0.24
COL4A6-205ENST00000468338 BAG3O95817 575 aa13.57□□□□□ -0.24
COL4A6-205ENST00000468338 PLCG2P16885 1265 aa13.57□□□□□ -0.24
COL4A6-205ENST00000468338 INPP5BP32019 993 aa13.57□□□□□ -0.24
COL4A6-205ENST00000468338 AAMPQ13685 434 aa13.57□□□□□ -0.24
COL4A6-205ENST00000468338 NOL9Q5SY16 702 aaKnown RBP13.57□□□□□ -0.24
COL4A6-205ENST00000468338 ERO1BQ86YB8 467 aa13.57□□□□□ -0.24
COL4A6-205ENST00000468338 SH3RF3Q8TEJ3 882 aaPredicted RBP13.57□□□□□ -0.24
COL4A6-205ENST00000468338 ZKSCAN4Q969J2 545 aaPredicted RBP13.57□□□□□ -0.24
COL4A6-205ENST00000468338 AATFQ9NY61 560 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL4A6-205ENST00000468338 FOCADQ5VW36 1801 aa13.57□□□□□ -0.24
COL4A6-205ENST00000468338 HAX1O00165 279 aa13.56□□□□□ -0.24
COL4A6-205ENST00000468338 ATMINO43313 823 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-205ENST00000468338 SMARCA5O60264 1052 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-205ENST00000468338 IDH1O75874 414 aaKnown RBP13.56□□□□□ -0.24
COL4A6-205ENST00000468338 MAP3K12Q12852 859 aa13.56□□□□□ -0.24
COL4A6-205ENST00000468338 TTF1Q15361 905 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-205ENST00000468338 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
COL4A6-205ENST00000468338 TEX11Q8IYF3 940 aa13.56□□□□□ -0.24
COL4A6-205ENST00000468338 TNS4Q8IZW8 715 aa13.56□□□□□ -0.24
COL4A6-205ENST00000468338 HAUS7Q99871 368 aa13.56□□□□□ -0.24
COL4A6-205ENST00000468338 PTPN18Q99952 460 aa13.56□□□□□ -0.24
COL4A6-205ENST00000468338 OSBPL5Q9H0X9 879 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-205ENST00000468338 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL4A6-205ENST00000468338 ALDH1A1P00352 501 aa13.55□□□□□ -0.24
COL4A6-205ENST00000468338 CYP7A1P22680 504 aa13.55□□□□□ -0.24
COL4A6-205ENST00000468338 PPATQ06203 517 aa13.55□□□□□ -0.24
COL4A6-205ENST00000468338 PICALMQ13492 652 aa13.55□□□□□ -0.24
COL4A6-205ENST00000468338 METTL16Q86W50 562 aaKnown RBP13.55□□□□□ -0.24
COL4A6-205ENST00000468338 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
COL4A6-205ENST00000468338 MAGEB6Q8N7X4 407 aa13.55□□□□□ -0.24
COL4A6-205ENST00000468338 NOL10Q9BSC4 688 aaKnown RBP13.55□□□□□ -0.24
COL4A6-205ENST00000468338 IRF6O14896 467 aa13.54□□□□□ -0.24
COL4A6-205ENST00000468338 SLURP2P0DP57 97 aa13.54□□□□□ -0.24
COL4A6-205ENST00000468338 GTF2A2P52657 109 aa13.54□□□□□ -0.24
COL4A6-205ENST00000468338 PPIL2Q13356 520 aa13.54□□□□□ -0.24
COL4A6-205ENST00000468338 HDAC1Q13547 482 aaPredicted RBP13.54□□□□□ -0.24
COL4A6-205ENST00000468338 BRI3BPQ8WY22 251 aa13.54□□□□□ -0.24
COL4A6-205ENST00000468338 RIOK1Q9BRS2 568 aaKnown RBP13.54□□□□□ -0.24
COL4A6-205ENST00000468338 BOLA2Q9H3K6 86 aa13.54□□□□□ -0.24
COL4A6-205ENST00000468338 R3HDMLQ9H3Y0 253 aa13.54□□□□□ -0.24
COL4A6-205ENST00000468338 KCNH4Q9UQ05 1017 aa13.54□□□□□ -0.24
COL4A6-205ENST00000468338 SIPA1L1O43166 1804 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 TCRBV5S4A2TA0A5A2 114 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 GOLIM4O00461 696 aa13.53□□□□□ -0.24
COL4A6-205ENST00000468338 CTNND1O60716 968 aaKnown RBP13.53□□□□□ -0.24
COL4A6-205ENST00000468338 TBC1D8O95759 1140 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms