RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 GOLIM4O00461 696 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 HLA-DOAP06340 250 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 PTPRAP18433 802 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 USP5P45974 858 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 AAMPQ13685 434 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 SLC9C2Q5TAH2 1124 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 MAPKAPK5Q8IW41 473 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 TBC1D2Q9BYX2 928 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.72■□□□□ 0.43
COMMD3-206ENST00000468179 NDUFB9Q9Y6M9 179 aa17.72■□□□□ 0.43
COMMD3-206ENST00000468179 CASP8AP2Q9UKL3 1982 aa17.71■□□□□ 0.43
COMMD3-206ENST00000468179 FASTKD5Q7L8L6 764 aaKnown RBP17.71■□□□□ 0.42
COMMD3-206ENST00000468179 ANKRD23Q86SG2 305 aa17.71■□□□□ 0.42
COMMD3-206ENST00000468179 HAUS7Q99871 368 aa17.71■□□□□ 0.42
COMMD3-206ENST00000468179 BOLA2Q9H3K6 86 aa17.71■□□□□ 0.42
COMMD3-206ENST00000468179 R3HDMLQ9H3Y0 253 aa17.71■□□□□ 0.42
COMMD3-206ENST00000468179 PAG1Q9NWQ8 432 aa17.71■□□□□ 0.42
COMMD3-206ENST00000468179 ZBTB47Q9UFB7 747 aaPredicted RBP17.71■□□□□ 0.42
COMMD3-206ENST00000468179 ZHX2Q9Y6X8 837 aa17.71■□□□□ 0.42
COMMD3-206ENST00000468179 FLT1P17948 1338 aa17.7■□□□□ 0.42
COMMD3-206ENST00000468179 MAST2Q6P0Q8 1798 aa17.7■□□□□ 0.42
COMMD3-206ENST00000468179 MAGEB6P1A0A0J9YX57 407 aa17.7■□□□□ 0.42
COMMD3-206ENST00000468179 CCDC85CA6NKD9 419 aa17.7■□□□□ 0.42
COMMD3-206ENST00000468179 BTBD19C9JJ37 291 aa17.7■□□□□ 0.42
COMMD3-206ENST00000468179 DYNLL1P63167 89 aaKnown RBP17.7■□□□□ 0.42
COMMD3-206ENST00000468179 SP3Q02447 781 aa17.7■□□□□ 0.42
COMMD3-206ENST00000468179 ZSCAN25Q6NSZ9 544 aa17.7■□□□□ 0.42
COMMD3-206ENST00000468179 FAM43AQ8N2R8 423 aa17.7■□□□□ 0.42
COMMD3-206ENST00000468179 CRACR2BQ8N4Y2 399 aaPredicted RBP17.7■□□□□ 0.42
COMMD3-206ENST00000468179 MIGA1Q8NAN2 632 aa17.7■□□□□ 0.42
COMMD3-206ENST00000468179 LAMB1P07942 1786 aa17.69■□□□□ 0.42
COMMD3-206ENST00000468179 PDE6AP16499 860 aa17.69■□□□□ 0.42
COMMD3-206ENST00000468179 TTC6Q86TZ1 520 aa17.69■□□□□ 0.42
COMMD3-206ENST00000468179 CRNKL1Q9BZJ0 848 aaKnown RBP17.69■□□□□ 0.42
COMMD3-206ENST00000468179 ECHDC1Q9NTX5 307 aa17.69■□□□□ 0.42
COMMD3-206ENST00000468179 GINM1Q9NU53 330 aa17.69■□□□□ 0.42
COMMD3-206ENST00000468179 SMARCA5O60264 1052 aaPredicted RBP17.68■□□□□ 0.42
COMMD3-206ENST00000468179 TLR2O60603 784 aa17.68■□□□□ 0.42
COMMD3-206ENST00000468179 CAP2P40123 477 aa17.68■□□□□ 0.42
COMMD3-206ENST00000468179 AS3MTQ9HBK9 375 aa17.68■□□□□ 0.42
COMMD3-206ENST00000468179 PALD1Q9ULE6 856 aa17.68■□□□□ 0.42
COMMD3-206ENST00000468179 AFG3L2Q9Y4W6 797 aa17.68■□□□□ 0.42
COMMD3-206ENST00000468179 PCDHB15Q9Y5E8 787 aa17.68■□□□□ 0.42
COMMD3-206ENST00000468179 DOCK2Q92608 1830 aa17.67■□□□□ 0.42
COMMD3-206ENST00000468179 PDHXO00330 501 aa17.67■□□□□ 0.42
COMMD3-206ENST00000468179 KIF22Q14807 665 aa17.67■□□□□ 0.42
COMMD3-206ENST00000468179 FBXO46Q6PJ61 603 aaPredicted RBP17.67■□□□□ 0.42
COMMD3-206ENST00000468179 METTL16Q86W50 562 aaKnown RBP17.67■□□□□ 0.42
COMMD3-206ENST00000468179 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
COMMD3-206ENST00000468179 ZNF532Q9HCE3 1301 aa17.67■□□□□ 0.42
COMMD3-206ENST00000468179 A0A0G2JLL6 359 aaPredicted RBP17.66■□□□□ 0.42
COMMD3-206ENST00000468179 USP17L5A8MUK1 530 aa17.66■□□□□ 0.42
COMMD3-206ENST00000468179 PRRT2Q7Z6L0 340 aaPredicted RBP17.66■□□□□ 0.42
COMMD3-206ENST00000468179 PARK7Q99497 189 aaKnown RBP17.66■□□□□ 0.42
COMMD3-206ENST00000468179 RIOK1Q9BRS2 568 aaKnown RBP17.66■□□□□ 0.42
COMMD3-206ENST00000468179 SAP30BPQ9UHR5 308 aaKnown RBP17.66■□□□□ 0.42
COMMD3-206ENST00000468179 TRIM17Q9Y577 477 aa17.66■□□□□ 0.42
COMMD3-206ENST00000468179 FAM196BA6NMK8 535 aa17.65■□□□□ 0.42
COMMD3-206ENST00000468179 PITPNM1O00562 1244 aa17.65■□□□□ 0.42
COMMD3-206ENST00000468179 ASNSP08243 561 aa17.65■□□□□ 0.42
COMMD3-206ENST00000468179 LRRFIP1Q32MZ4 808 aaKnown RBP17.65■□□□□ 0.42
COMMD3-206ENST00000468179 EHD4Q9H223 541 aa17.65■□□□□ 0.42
COMMD3-206ENST00000468179 EFCC1Q9HA90 598 aa17.65■□□□□ 0.42
COMMD3-206ENST00000468179 SLC45A1Q9Y2W3 748 aa17.65■□□□□ 0.42
COMMD3-206ENST00000468179 TRIM75PA6NK02 468 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 ERC2O15083 957 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 POLR3DP05423 398 aaPredicted RBP17.64■□□□□ 0.41
COMMD3-206ENST00000468179 SLURP2P0DP57 97 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 ADD2P35612 726 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 UBE3CQ15386 1083 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 GADL1Q6ZQY3 521 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 ZNF280CQ8ND82 737 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 CD99L2Q8TCZ2 262 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 GCC1Q96CN9 775 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 EDC3Q96F86 508 aaKnown RBP17.64■□□□□ 0.41
COMMD3-206ENST00000468179 DDRGK1Q96HY6 314 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 SERPINB13Q9UIV8 391 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 TAOK2Q9UL54 1235 aa17.64■□□□□ 0.41
COMMD3-206ENST00000468179 TTC41PQ6P2S7 1318 aa17.63■□□□□ 0.41
COMMD3-206ENST00000468179 TCRBV5S4A2TA0A5A2 114 aa17.63■□□□□ 0.41
COMMD3-206ENST00000468179 MOGSQ13724 837 aa17.63■□□□□ 0.41
COMMD3-206ENST00000468179 OTOP1Q7RTM1 612 aa17.63■□□□□ 0.41
COMMD3-206ENST00000468179 PROCA1Q8NCQ7 364 aaPredicted RBP17.63■□□□□ 0.41
COMMD3-206ENST00000468179 HPS5Q9UPZ3 1129 aa17.63■□□□□ 0.41
COMMD3-206ENST00000468179 GNRH1P01148 92 aa17.62■□□□□ 0.41
COMMD3-206ENST00000468179 SPP2Q13103 211 aa17.62■□□□□ 0.41
COMMD3-206ENST00000468179 PABPC4Q13310 644 aaKnown RBP eCLIP17.62■□□□□ 0.41
COMMD3-206ENST00000468179 HDAC1Q13547 482 aaPredicted RBP17.62■□□□□ 0.41
COMMD3-206ENST00000468179 GPAT2Q6NUI2 795 aa17.62■□□□□ 0.41
COMMD3-206ENST00000468179 AMOTL1Q8IY63 956 aa17.62■□□□□ 0.41
COMMD3-206ENST00000468179 WDR18Q9BV38 432 aa17.62■□□□□ 0.41
COMMD3-206ENST00000468179 ATP8A2Q9NTI2 1148 aa17.62■□□□□ 0.41
COMMD3-206ENST00000468179 MCM9Q9NXL9 1143 aa17.62■□□□□ 0.41
COMMD3-206ENST00000468179 PNMA3Q9UL41 463 aa17.62■□□□□ 0.41
COMMD3-206ENST00000468179 ZFYP08048 801 aaPredicted RBP17.61■□□□□ 0.41
COMMD3-206ENST00000468179 C17orf99Q6UX52 265 aa17.61■□□□□ 0.41
COMMD3-206ENST00000468179 RWDD1Q9H446 243 aaPredicted RBP17.61■□□□□ 0.41
COMMD3-206ENST00000468179 AGTPBP1Q9UPW5 1226 aa17.61■□□□□ 0.41
COMMD3-206ENST00000468179 C19orf81C9J6K1 198 aa17.6■□□□□ 0.41
COMMD3-206ENST00000468179 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms