RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 SMYD1Q8NB12 490 aa10.46□□□□□ -0.73
LCA5-203ENST00000467898 LZICQ8WZA0 190 aa10.46□□□□□ -0.73
LCA5-203ENST00000467898 BHMTQ93088 406 aa10.46□□□□□ -0.73
LCA5-203ENST00000467898 CCDC102AQ96A19 550 aa10.46□□□□□ -0.73
LCA5-203ENST00000467898 CHAMP1Q96JM3 812 aa10.46□□□□□ -0.73
LCA5-203ENST00000467898 CLIC6Q96NY7 704 aa10.46□□□□□ -0.73
LCA5-203ENST00000467898 NAT10Q9H0A0 1025 aaKnown RBP10.46□□□□□ -0.73
LCA5-203ENST00000467898 GOLGA6L7A0A1B0GV03 622 aa10.46□□□□□ -0.74
LCA5-203ENST00000467898 KRT24Q2M2I5 525 aa10.46□□□□□ -0.74
LCA5-203ENST00000467898 AKNAD1Q5T1N1 836 aa10.46□□□□□ -0.74
LCA5-203ENST00000467898 RBM43Q6ZSC3 357 aaKnown RBP10.46□□□□□ -0.74
LCA5-203ENST00000467898 PARP9Q8IXQ6 854 aa10.46□□□□□ -0.74
LCA5-203ENST00000467898 SPAG5Q96R06 1193 aa10.46□□□□□ -0.74
LCA5-203ENST00000467898 TRPC6Q9Y210 931 aa10.46□□□□□ -0.74
LCA5-203ENST00000467898 PARP3Q9Y6F1 533 aa10.46□□□□□ -0.74
LCA5-203ENST00000467898 MST1RQ04912 1400 aa10.46□□□□□ -0.74
LCA5-203ENST00000467898 FAM208AQ9UK61 1670 aaKnown RBP10.45□□□□□ -0.74
LCA5-203ENST00000467898 ZBTB7BO15156 539 aaPredicted RBP10.45□□□□□ -0.74
LCA5-203ENST00000467898 ACTN3Q08043 901 aaPredicted RBP10.45□□□□□ -0.74
LCA5-203ENST00000467898 CEP57Q86XR8 500 aa10.45□□□□□ -0.74
LCA5-203ENST00000467898 RNF168Q8IYW5 571 aaPredicted RBP10.45□□□□□ -0.74
LCA5-203ENST00000467898 SCLT1Q96NL6 688 aa10.45□□□□□ -0.74
LCA5-203ENST00000467898 ACTR5Q9H9F9 607 aaPredicted RBP10.45□□□□□ -0.74
LCA5-203ENST00000467898 ANKIB1Q9P2G1 1089 aa10.45□□□□□ -0.74
LCA5-203ENST00000467898 MED1Q15648 1581 aaPredicted RBP10.45□□□□□ -0.74
LCA5-203ENST00000467898 FRMD3A2A2Y4 597 aa10.45□□□□□ -0.74
LCA5-203ENST00000467898 ATP5JP18859 108 aa10.45□□□□□ -0.74
LCA5-203ENST00000467898 INTS3Q68E01 1043 aaKnown RBP10.45□□□□□ -0.74
LCA5-203ENST00000467898 BZW1Q7L1Q6 419 aaKnown RBP10.45□□□□□ -0.74
LCA5-203ENST00000467898 MSANTD4Q8NCY6 345 aa10.45□□□□□ -0.74
LCA5-203ENST00000467898 MPHOSPH6Q99547 160 aaKnown RBP10.45□□□□□ -0.74
LCA5-203ENST00000467898 TSC22D3Q99576 134 aa10.45□□□□□ -0.74
LCA5-203ENST00000467898 TMEM165Q9HC07 324 aa10.45□□□□□ -0.74
LCA5-203ENST00000467898 ZSCAN12O43309 604 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 PKN1Q16512 942 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 ESCO1Q5FWF5 840 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 NUGGCQ68CJ6 796 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 FCHSD1Q86WN1 690 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 ACSBG1Q96GR2 724 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 ORAI2Q96SN7 254 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 EBF2Q9HAK2 575 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 RTEL1Q9NZ71 1219 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 BIN2Q9UBW5 565 aaPredicted RBP10.44□□□□□ -0.74
LCA5-203ENST00000467898 NCAPD2Q15021 1401 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 C1orf167Q5SNV9 1468 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 LMO7Q8WWI1 1683 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 ABLIM1O14639 778 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 CREB3O43889 395 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 CEP104O60308 925 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 PRPF6O94906 941 aaKnown RBP10.44□□□□□ -0.74
LCA5-203ENST00000467898 VIL1P09327 827 aaKnown RBP10.44□□□□□ -0.74
LCA5-203ENST00000467898 INF2Q27J81 1249 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 KIAA0753Q2KHM9 967 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 SWAP70Q9UH65 585 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 ZNF510Q9Y2H8 683 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 B4DLN1 442 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 LUC7L3O95232 432 aaKnown RBP10.44□□□□□ -0.74
LCA5-203ENST00000467898 DESP17661 470 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 FLT3P36888 993 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 MAGEA10P43363 369 aaPredicted RBP10.44□□□□□ -0.74
LCA5-203ENST00000467898 ATP2B2Q01814 1243 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 PPP2R3AQ06190 1150 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 CCDC92Q53HC0 331 aaPredicted RBP10.44□□□□□ -0.74
LCA5-203ENST00000467898 ARMC9Q7Z3E5 817 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 STAG2Q8N3U4 1231 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 LEO1Q8WVC0 666 aaPredicted RBP10.44□□□□□ -0.74
LCA5-203ENST00000467898 IP6K1Q92551 441 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 DHRS1Q96LJ7 313 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 PHACTR1Q9C0D0 580 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 NUP62CLQ9H1M0 184 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 PLEKHA4Q9H4M7 779 aa10.44□□□□□ -0.74
LCA5-203ENST00000467898 RNF40O75150 1001 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 URI1O94763 535 aaPredicted RBP10.43□□□□□ -0.74
LCA5-203ENST00000467898 CCDC175P0C221 793 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 MYBPC3Q14896 1274 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 Q4G0T1 1027 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 GORABQ5T7V8 394 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 CRELD2Q6UXH1 353 aaPredicted RBP10.43□□□□□ -0.74
LCA5-203ENST00000467898 CCHCR1Q8TD31 782 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 SMARCC1Q92922 1105 aaPredicted RBP10.43□□□□□ -0.74
LCA5-203ENST00000467898 KCNN1Q92952 543 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 TRAIPQ9BWF2 469 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.43□□□□□ -0.74
LCA5-203ENST00000467898 CDHR2Q9BYE9 1310 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 XIRP1Q702N8 1843 aaKnown RBP10.43□□□□□ -0.74
LCA5-203ENST00000467898 N4BP2Q86UW6 1770 aaPredicted RBP10.43□□□□□ -0.74
LCA5-203ENST00000467898 EIF3HO15372 352 aaKnown RBP eCLIP10.43□□□□□ -0.74
LCA5-203ENST00000467898 MGRN1O60291 552 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 KRT38O76015 456 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 PPFIA1Q13136 1202 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 GNL2Q13823 731 aaKnown RBP10.43□□□□□ -0.74
LCA5-203ENST00000467898 TUBB2AQ13885 445 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 SYNE3Q6ZMZ3 975 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 HOMER1Q86YM7 354 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 RUFY1Q96T51 708 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 TUBB2BQ9BVA1 445 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 GDPD2Q9HCC8 539 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 HOOK1Q9UJC3 728 aaKnown RBP10.43□□□□□ -0.74
LCA5-203ENST00000467898 PHF24Q9UPV7 400 aa10.43□□□□□ -0.74
LCA5-203ENST00000467898 KDM3BQ7LBC6 1761 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms