RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 USP25Q9UHP3 1055 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 PCDHB11Q9Y5F2 797 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 MRC1P22897 1456 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 TCHHQ07283 1943 aa6.19□□□□□ -1.42
RIF1-209ENST00000467762 TMEM94Q12767 1356 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 NPHP4O75161 1426 aaPredicted RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 SLC35F4A4IF30 521 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 DYNC1I1O14576 645 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 PTMAP06454 111 aaKnown RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 CCDC192P0DO97 292 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 TATP17735 454 aaPredicted RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 ATP5JP18859 108 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 CASTP20810 708 aaKnown RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 ATP2B4P23634 1241 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 GTF2F1P35269 517 aaKnown RBP eCLIP6.18□□□□□ -1.42
RIF1-209ENST00000467762 KCNJ4P48050 445 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 KRT85P78386 507 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 TAGLNQ01995 201 aaKnown RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 CCDC144BQ3MJ40 725 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 USPL1Q5W0Q7 1092 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 CREB3L3Q68CJ9 461 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 AACSQ86V21 672 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 ZCRB1Q8TBF4 217 aaKnown RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 RAPGEF4Q8WZA2 1011 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 PRIMPOLQ96LW4 560 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 JAKMIP1Q96N16 626 aaKnown RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 LLPHQ9BRT6 129 aaKnown RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 METTL22Q9BUU2 404 aaPredicted RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 UPF3BQ9BZI7 483 aaKnown RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 ZSCAN16Q9H4T2 348 aaPredicted RBP6.18□□□□□ -1.42
RIF1-209ENST00000467762 C19orf44Q9H6X5 657 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 GPR108Q9NPR9 543 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 STK17AQ9UEE5 414 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 JCADQ9P266 1359 aa6.18□□□□□ -1.42
RIF1-209ENST00000467762 DCCP43146 1447 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 ATP5J2-PTCD1G3V325 749 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 SNRPA1P09661 255 aaKnown RBP6.17□□□□□ -1.42
RIF1-209ENST00000467762 RPS6KB1P23443 525 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 MAPK1P28482 360 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 GJB2P29033 226 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 GCKRQ14397 625 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 DHX8Q14562 1220 aaKnown RBP6.17□□□□□ -1.42
RIF1-209ENST00000467762 EAPPQ56P03 285 aaPredicted RBP6.17□□□□□ -1.42
RIF1-209ENST00000467762 C9orf131Q5VYM1 1079 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 NUTM2GQ5VZR2 741 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 TSHZ3Q63HK5 1081 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 EGFLAMQ63HQ2 1017 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 LARP1BQ659C4 914 aaKnown RBP6.17□□□□□ -1.42
RIF1-209ENST00000467762 ZNF790Q6PG37 636 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 BLOC1S2Q6QNY1 142 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 SASS6Q6UVJ0 657 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 MPRIPQ6WCQ1 1025 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 KRT28Q7Z3Y7 464 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 IFNL2Q8IZJ0 200 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 LARGE2Q8N3Y3 721 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 GPR161Q8N6U8 529 aaKnown RBP6.17□□□□□ -1.42
RIF1-209ENST00000467762 DHX38Q92620 1227 aaKnown RBP6.17□□□□□ -1.42
RIF1-209ENST00000467762 CLP1Q92989 425 aaKnown RBP6.17□□□□□ -1.42
RIF1-209ENST00000467762 DCAF5Q96JK2 942 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 CCDC85AQ96PX6 553 aaPredicted RBP6.17□□□□□ -1.42
RIF1-209ENST00000467762 SLC52A2Q9HAB3 445 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 ATG3Q9NT62 314 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 DDX19AQ9NUU7 478 aaKnown RBP6.17□□□□□ -1.42
RIF1-209ENST00000467762 KLHL42Q9P2K6 505 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 CFAP45Q9UL16 551 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 SPEF2Q9C093 1822 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 ADAMTSL3P82987 1691 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 ALS2Q96Q42 1657 aa6.17□□□□□ -1.42
RIF1-209ENST00000467762 GOLGA6L4A6NEF3 574 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 NEURL1BA8MQ27 555 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 CTAGE5O15320 804 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 MCCD1P59942 119 aaPredicted RBP6.16□□□□□ -1.42
RIF1-209ENST00000467762 GNL2Q13823 731 aaKnown RBP6.16□□□□□ -1.42
RIF1-209ENST00000467762 COL19A1Q14993 1142 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 RABL6Q3YEC7 729 aaPredicted RBP6.16□□□□□ -1.42
RIF1-209ENST00000467762 PRPF40BQ6NWY9 871 aaKnown RBP6.16□□□□□ -1.42
RIF1-209ENST00000467762 TTC5Q8N0Z6 440 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 USHBP1Q8N6Y0 703 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 ZSCAN1Q8NBB4 408 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.16□□□□□ -1.42
RIF1-209ENST00000467762 ARMC5Q96C12 935 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 FMNL2Q96PY5 1086 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 BICC1Q9H694 974 aaKnown RBP6.16□□□□□ -1.42
RIF1-209ENST00000467762 HELLSQ9NRZ9 838 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 NLRP2Q9NX02 1062 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 CEP126Q9P2H0 1117 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 MTMR6Q9Y217 621 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 RBM8AQ9Y5S9 174 aaKnown RBP6.16□□□□□ -1.42
RIF1-209ENST00000467762 NPHP3Q7Z494 1330 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 MED23Q9ULK4 1368 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 LAMB4A4D0S4 1761 aa6.16□□□□□ -1.42
RIF1-209ENST00000467762 A0A1W2PRU2 124 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 MEN1O00255 615 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 SLC27A2O14975 620 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 KCNQ3O43525 872 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 SASH1O94885 1247 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 PHKG2P15735 406 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 RHOQP17081 205 aa6.15□□□□□ -1.42
RIF1-209ENST00000467762 SETQ01105 290 aaPredicted RBP6.15□□□□□ -1.42
RIF1-209ENST00000467762 KRT76Q01546 638 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms