RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 TBC1D12O60347 775 aa20.34■□□□□ 0.85
VARS2-204ENST00000467717 FMR1Q06787 632 aaKnown RBP eCLIP20.34■□□□□ 0.85
VARS2-204ENST00000467717 DCAF15Q66K64 600 aa20.34■□□□□ 0.85
VARS2-204ENST00000467717 METTL16Q86W50 562 aaKnown RBP20.34■□□□□ 0.85
VARS2-204ENST00000467717 HERC5Q9UII4 1024 aaKnown RBP20.34■□□□□ 0.85
VARS2-204ENST00000467717 SERPINB13Q9UIV8 391 aa20.34■□□□□ 0.85
VARS2-204ENST00000467717 TAOK2Q9UL54 1235 aa20.34■□□□□ 0.85
VARS2-204ENST00000467717 PPP1R12BO60237 982 aaPredicted RBP20.33■□□□□ 0.85
VARS2-204ENST00000467717 MAP3K10Q02779 954 aa20.33■□□□□ 0.85
VARS2-204ENST00000467717 PPARAQ07869 468 aa20.33■□□□□ 0.85
VARS2-204ENST00000467717 MIGA2Q7L4E1 593 aa20.33■□□□□ 0.85
VARS2-204ENST00000467717 CRACR2BQ8N4Y2 399 aaPredicted RBP20.33■□□□□ 0.85
VARS2-204ENST00000467717 TRIM34Q9BYJ4 488 aa20.33■□□□□ 0.85
VARS2-204ENST00000467717 ZNF408Q9H9D4 720 aa20.33■□□□□ 0.85
VARS2-204ENST00000467717 ZNF213O14771 459 aa20.32■□□□□ 0.84
VARS2-204ENST00000467717 EPB41L2O43491 1005 aaKnown RBP20.32■□□□□ 0.84
VARS2-204ENST00000467717 CELF2O95319 508 aaKnown RBP20.32■□□□□ 0.84
VARS2-204ENST00000467717 SLC3A2P08195 630 aaKnown RBP20.32■□□□□ 0.84
VARS2-204ENST00000467717 EVX2Q03828 476 aa20.32■□□□□ 0.84
VARS2-204ENST00000467717 GABPAQ06546 454 aa20.32■□□□□ 0.84
VARS2-204ENST00000467717 IMMTQ16891 758 aaKnown RBP20.32■□□□□ 0.84
VARS2-204ENST00000467717 RBM8AQ9Y5S9 174 aaKnown RBP20.32■□□□□ 0.84
VARS2-204ENST00000467717 FKBP1BP68106 108 aa20.31■□□□□ 0.84
VARS2-204ENST00000467717 ZNF341Q9BYN7 854 aa20.31■□□□□ 0.84
VARS2-204ENST00000467717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.31■□□□□ 0.84
VARS2-204ENST00000467717 SWAP70Q9UH65 585 aa20.31■□□□□ 0.84
VARS2-204ENST00000467717 ANAPC4Q9UJX5 808 aa20.31■□□□□ 0.84
VARS2-204ENST00000467717 ECM29Q5VYK3 1845 aa20.31■□□□□ 0.84
VARS2-204ENST00000467717 SSC5DA1L4H1 1573 aa20.3■□□□□ 0.84
VARS2-204ENST00000467717 SMIM22K7EJ46 135 aa20.3■□□□□ 0.84
VARS2-204ENST00000467717 C16orf86Q6ZW13 317 aa20.3■□□□□ 0.84
VARS2-204ENST00000467717 DYNLL2Q96FJ2 89 aa20.3■□□□□ 0.84
VARS2-204ENST00000467717 DNAJC18Q9H819 358 aa20.3■□□□□ 0.84
VARS2-204ENST00000467717 ROBO3Q96MS0 1386 aa20.3■□□□□ 0.84
VARS2-204ENST00000467717 USP2O75604 605 aaPredicted RBP20.29■□□□□ 0.84
VARS2-204ENST00000467717 SLURP2P0DP57 97 aa20.29■□□□□ 0.84
VARS2-204ENST00000467717 HAND2P61296 217 aa20.29■□□□□ 0.84
VARS2-204ENST00000467717 PRKG1Q13976 671 aa20.29■□□□□ 0.84
VARS2-204ENST00000467717 TTLL12Q14166 644 aaPredicted RBP20.29■□□□□ 0.84
VARS2-204ENST00000467717 CST9Q5W186 159 aa20.29■□□□□ 0.84
VARS2-204ENST00000467717 ARMC9Q7Z3E5 817 aa20.29■□□□□ 0.84
VARS2-204ENST00000467717 ZNF287Q9HBT7 754 aa20.29■□□□□ 0.84
VARS2-204ENST00000467717 GBA2Q9HCG7 927 aaPredicted RBP20.29■□□□□ 0.84
VARS2-204ENST00000467717 FAM196BA6NMK8 535 aa20.28■□□□□ 0.84
VARS2-204ENST00000467717 IREB2P48200 963 aaKnown RBP20.28■□□□□ 0.84
VARS2-204ENST00000467717 CDK8P49336 464 aa20.28■□□□□ 0.84
VARS2-204ENST00000467717 PDE4BQ07343 736 aa20.28■□□□□ 0.84
VARS2-204ENST00000467717 NECTIN1Q15223 517 aa20.28■□□□□ 0.84
VARS2-204ENST00000467717 MAP3K11Q16584 847 aa20.28■□□□□ 0.84
VARS2-204ENST00000467717 C2orf69Q8N8R5 385 aa20.28■□□□□ 0.84
VARS2-204ENST00000467717 USP26Q9BXU7 913 aa20.28■□□□□ 0.84
VARS2-204ENST00000467717 RNF41Q9H4P4 317 aaPredicted RBP20.28■□□□□ 0.84
VARS2-204ENST00000467717 ZNF112Q9UJU3 913 aa20.28■□□□□ 0.84
VARS2-204ENST00000467717 ANGEL1Q9UNK9 670 aaKnown RBP20.28■□□□□ 0.84
VARS2-204ENST00000467717 SEC24BO95487 1268 aa20.27■□□□□ 0.84
VARS2-204ENST00000467717 CYP21A2P08686 494 aa20.27■□□□□ 0.84
VARS2-204ENST00000467717 PCP11498 1178 aaKnown RBP20.27■□□□□ 0.84
VARS2-204ENST00000467717 SHMT1P34896 483 aa20.27■□□□□ 0.84
VARS2-204ENST00000467717 CTDSPL2Q05D32 466 aa20.27■□□□□ 0.84
VARS2-204ENST00000467717 RNF20Q5VTR2 975 aa20.27■□□□□ 0.84
VARS2-204ENST00000467717 TATDN1Q6P1N9 297 aa20.27■□□□□ 0.84
VARS2-204ENST00000467717 STK11IPQ8N1F8 1099 aa20.27■□□□□ 0.84
VARS2-204ENST00000467717 SLC44A5Q8NCS7 719 aa20.27■□□□□ 0.84
VARS2-204ENST00000467717 MKNK2Q9HBH9 465 aa20.27■□□□□ 0.84
VARS2-204ENST00000467717 FZD1Q9UP38 647 aa20.27■□□□□ 0.84
VARS2-204ENST00000467717 PHF20L1A8MW92 1017 aa20.26■□□□□ 0.83
VARS2-204ENST00000467717 FGRP09769 529 aa20.26■□□□□ 0.83
VARS2-204ENST00000467717 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
VARS2-204ENST00000467717 CREB3L3Q68CJ9 461 aa20.26■□□□□ 0.83
VARS2-204ENST00000467717 TBC1D10CQ8IV04 446 aa20.26■□□□□ 0.83
VARS2-204ENST00000467717 STAG1Q8WVM7 1258 aa20.26■□□□□ 0.83
VARS2-204ENST00000467717 WRNIP1Q96S55 665 aa20.26■□□□□ 0.83
VARS2-204ENST00000467717 NBPF3Q9H094 633 aa20.26■□□□□ 0.83
VARS2-204ENST00000467717 DDX60LQ5H9U9 1706 aaKnown RBP20.25■□□□□ 0.83
VARS2-204ENST00000467717 POLR2AP24928 1970 aaKnown RBP20.25■□□□□ 0.83
VARS2-204ENST00000467717 SLC27A2O14975 620 aa20.25■□□□□ 0.83
VARS2-204ENST00000467717 HSPA4P34932 840 aa20.25■□□□□ 0.83
VARS2-204ENST00000467717 AKNAD1Q5T1N1 836 aa20.25■□□□□ 0.83
VARS2-204ENST00000467717 MFSD6Q6ZSS7 791 aa20.25■□□□□ 0.83
VARS2-204ENST00000467717 MOB2Q70IA6 237 aa20.25■□□□□ 0.83
VARS2-204ENST00000467717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.25■□□□□ 0.83
VARS2-204ENST00000467717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.25■□□□□ 0.83
VARS2-204ENST00000467717 FOCADQ5VW36 1801 aa20.25■□□□□ 0.83
VARS2-204ENST00000467717 UNCXA6NJT0 531 aa20.24■□□□□ 0.83
VARS2-204ENST00000467717 TMEM88BA6NKF7 163 aa20.24■□□□□ 0.83
VARS2-204ENST00000467717 ORC4O43929 436 aa20.24■□□□□ 0.83
VARS2-204ENST00000467717 CTNND1O60716 968 aaKnown RBP20.24■□□□□ 0.83
VARS2-204ENST00000467717 PRDM1O75626 825 aa20.24■□□□□ 0.83
VARS2-204ENST00000467717 MCCP23508 829 aa20.24■□□□□ 0.83
VARS2-204ENST00000467717 CERKLQ49MI3 558 aaPredicted RBP20.24■□□□□ 0.83
VARS2-204ENST00000467717 ZNF444Q8N0Y2 327 aaPredicted RBP20.24■□□□□ 0.83
VARS2-204ENST00000467717 CCDC17Q96LX7 622 aa20.24■□□□□ 0.83
VARS2-204ENST00000467717 NAV1Q8NEY1 1877 aa20.24■□□□□ 0.83
VARS2-204ENST00000467717 UBE2Q2LH0YL09 131 aa20.23■□□□□ 0.83
VARS2-204ENST00000467717 ZKSCAN1P17029 563 aaPredicted RBP20.23■□□□□ 0.83
VARS2-204ENST00000467717 INPP5BP32019 993 aa20.23■□□□□ 0.83
VARS2-204ENST00000467717 CAP2P40123 477 aa20.23■□□□□ 0.83
VARS2-204ENST00000467717 NT5C2P49902 561 aa20.23■□□□□ 0.83
VARS2-204ENST00000467717 RRP1BQ14684 758 aaKnown RBP20.23■□□□□ 0.83
VARS2-204ENST00000467717 LDLRAD1Q5T700 205 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms