RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 PRPF40AO75400 957 aaKnown RBP7.47□□□□□ -1.21
LRCH3-212ENST00000466845 ADMP35318 185 aa7.47□□□□□ -1.21
LRCH3-212ENST00000466845 GP2P55259 537 aaKnown RBP7.47□□□□□ -1.21
LRCH3-212ENST00000466845 ZC3H12AQ5D1E8 599 aaKnown RBP7.47□□□□□ -1.21
LRCH3-212ENST00000466845 SV2BQ7L1I2 683 aa7.47□□□□□ -1.21
LRCH3-212ENST00000466845 SMYD4Q8IYR2 804 aaPredicted RBP7.47□□□□□ -1.21
LRCH3-212ENST00000466845 ZC3H12CQ9C0D7 883 aaKnown RBP7.47□□□□□ -1.21
LRCH3-212ENST00000466845 DISC1Q9NRI5 854 aa7.47□□□□□ -1.21
LRCH3-212ENST00000466845 C1GALT1Q9NS00 363 aa7.47□□□□□ -1.21
LRCH3-212ENST00000466845 BSDC1Q9NW68 430 aaPredicted RBP7.47□□□□□ -1.21
LRCH3-212ENST00000466845 DAGLAQ9Y4D2 1042 aa7.47□□□□□ -1.21
LRCH3-212ENST00000466845 SMARCA4P51532 1647 aa7.47□□□□□ -1.21
LRCH3-212ENST00000466845 SMARCA2P51531 1590 aa7.46□□□□□ -1.21
LRCH3-212ENST00000466845 P4HBP07237 508 aaKnown RBP7.46□□□□□ -1.22
LRCH3-212ENST00000466845 EIF4BP23588 611 aaKnown RBP7.46□□□□□ -1.22
LRCH3-212ENST00000466845 GNA15P30679 374 aa7.46□□□□□ -1.22
LRCH3-212ENST00000466845 ITGAEP38570 1179 aa7.46□□□□□ -1.22
LRCH3-212ENST00000466845 MSMPQ1L6U9 139 aa7.46□□□□□ -1.22
LRCH3-212ENST00000466845 RNF214Q8ND24 703 aa7.46□□□□□ -1.22
LRCH3-212ENST00000466845 WDR89Q96FK6 387 aaPredicted RBP7.46□□□□□ -1.22
LRCH3-212ENST00000466845 FBXL18Q96ME1 805 aa7.46□□□□□ -1.22
LRCH3-212ENST00000466845 CBX8Q9HC52 389 aa7.46□□□□□ -1.22
LRCH3-212ENST00000466845 BAZ1AQ9NRL2 1556 aaPredicted RBP7.46□□□□□ -1.22
LRCH3-212ENST00000466845 COL17A1Q9UMD9 1497 aaPredicted RBP7.45□□□□□ -1.22
LRCH3-212ENST00000466845 ENC1O14682 589 aa7.45□□□□□ -1.22
LRCH3-212ENST00000466845 ERCC3P19447 782 aa7.45□□□□□ -1.22
LRCH3-212ENST00000466845 BMP6P22004 513 aa7.45□□□□□ -1.22
LRCH3-212ENST00000466845 EAPPQ56P03 285 aaPredicted RBP7.45□□□□□ -1.22
LRCH3-212ENST00000466845 MAP1SQ66K74 1059 aaPredicted RBP7.45□□□□□ -1.22
LRCH3-212ENST00000466845 TPTE2Q6XPS3 522 aa7.45□□□□□ -1.22
LRCH3-212ENST00000466845 KCT2Q8NC54 265 aa7.45□□□□□ -1.22
LRCH3-212ENST00000466845 ACSBG1Q96GR2 724 aa7.45□□□□□ -1.22
LRCH3-212ENST00000466845 HIRIP3Q9BW71 556 aaPredicted RBP7.45□□□□□ -1.22
LRCH3-212ENST00000466845 WWC3Q9ULE0 1092 aa7.45□□□□□ -1.22
LRCH3-212ENST00000466845 ANGEL1Q9UNK9 670 aaKnown RBP7.45□□□□□ -1.22
LRCH3-212ENST00000466845 FAM170BA6NMN3 283 aa7.44□□□□□ -1.22
LRCH3-212ENST00000466845 RNGTTO60942 597 aaKnown RBP7.44□□□□□ -1.22
LRCH3-212ENST00000466845 IRAK1P51617 712 aa7.44□□□□□ -1.22
LRCH3-212ENST00000466845 LLGL2Q6P1M3 1020 aa7.44□□□□□ -1.22
LRCH3-212ENST00000466845 APBB1IPQ7Z5R6 666 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-212ENST00000466845 VSIG10LQ86VR7 867 aa7.44□□□□□ -1.22
LRCH3-212ENST00000466845 MKNK2Q9HBH9 465 aa7.44□□□□□ -1.22
LRCH3-212ENST00000466845 AK5Q9Y6K8 562 aa7.44□□□□□ -1.22
LRCH3-212ENST00000466845 NCAPD3P42695 1498 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 ATAD2BQ9ULI0 1458 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 HMGXB3Q12766 1538 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 ANKRD33BA6NCL7 494 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 CLGNO14967 610 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 FANCGO15287 622 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 USP17L7P0C7H9 530 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 HOXA10P31260 410 aaPredicted RBP7.43□□□□□ -1.22
LRCH3-212ENST00000466845 TTLL4Q14679 1199 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 RALBP1Q15311 655 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 STK11IPQ8N1F8 1099 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 STK35Q8TDR2 534 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 GPBAR1Q8TDU6 330 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 MICAL1Q8TDZ2 1067 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 MISP3Q96FF7 219 aa7.43□□□□□ -1.22
LRCH3-212ENST00000466845 SSU72Q9NP77 194 aaKnown RBP7.43□□□□□ -1.22
LRCH3-212ENST00000466845 RLBP1P12271 317 aa7.42□□□□□ -1.22
LRCH3-212ENST00000466845 ZNF765Q7L2R6 523 aa7.42□□□□□ -1.22
LRCH3-212ENST00000466845 AGBL5Q8NDL9 886 aa7.42□□□□□ -1.22
LRCH3-212ENST00000466845 DRC1Q96MC2 740 aa7.42□□□□□ -1.22
LRCH3-212ENST00000466845 CCDC39Q9UFE4 941 aa7.42□□□□□ -1.22
LRCH3-212ENST00000466845 BAZ1BQ9UIG0 1483 aaKnown RBP7.42□□□□□ -1.22
LRCH3-212ENST00000466845 RPS26P62854 115 aaKnown RBP7.41□□□□□ -1.22
LRCH3-212ENST00000466845 DIEXFQ68CQ4 756 aaKnown RBP7.41□□□□□ -1.22
LRCH3-212ENST00000466845 MCTP1Q6DN14 999 aa7.41□□□□□ -1.22
LRCH3-212ENST00000466845 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.41□□□□□ -1.22
LRCH3-212ENST00000466845 ZNF622Q969S3 477 aaKnown RBP eCLIP7.41□□□□□ -1.22
LRCH3-212ENST00000466845 PSMG3-AS1Q96PY0 264 aa7.41□□□□□ -1.22
LRCH3-212ENST00000466845 OAS3Q9Y6K5 1087 aaKnown RBP7.41□□□□□ -1.22
LRCH3-212ENST00000466845 RING1Q06587 406 aa7.4□□□□□ -1.22
LRCH3-212ENST00000466845 TSHZ1Q6ZSZ6 1077 aa7.4□□□□□ -1.22
LRCH3-212ENST00000466845 SHISA5Q8N114 240 aa7.4□□□□□ -1.22
LRCH3-212ENST00000466845 EVI5LQ96CN4 794 aa7.4□□□□□ -1.22
LRCH3-212ENST00000466845 SETDB2Q96T68 719 aa7.4□□□□□ -1.22
LRCH3-212ENST00000466845 TTF2Q9UNY4 1162 aaKnown RBP7.4□□□□□ -1.22
LRCH3-212ENST00000466845 SNCAIPQ9Y6H5 919 aa7.4□□□□□ -1.22
LRCH3-212ENST00000466845 ERCC6Q03468 1493 aa7.4□□□□□ -1.22
LRCH3-212ENST00000466845 DYNC1LI2O43237 492 aaPredicted RBP7.39□□□□□ -1.23
LRCH3-212ENST00000466845 PAX4O43316 350 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 FAM87AP0C7U9 286 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 HCLS1P14317 486 aaPredicted RBP7.39□□□□□ -1.23
LRCH3-212ENST00000466845 MYBPC2Q14324 1141 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 PCNX4Q63HM2 1172 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 RINLQ6ZS11 566 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 CDC37L1Q7L3B6 337 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 ZNF507Q8TCN5 953 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 GRIN3AQ8TCU5 1115 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 ISL2Q96A47 359 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 LRRC4CQ9HCJ2 640 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 PICK1Q9NRD5 415 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 ZC3H7BQ9UGR2 993 aaKnown RBP7.39□□□□□ -1.23
LRCH3-212ENST00000466845 PCDHA4Q9UN74 947 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 TACC3Q9Y6A5 838 aa7.39□□□□□ -1.23
LRCH3-212ENST00000466845 PAGE1O75459 146 aa7.38□□□□□ -1.23
LRCH3-212ENST00000466845 LMNB1P20700 586 aa7.38□□□□□ -1.23
LRCH3-212ENST00000466845 MMP14P50281 582 aa7.38□□□□□ -1.23
LRCH3-212ENST00000466845 ZNF662Q6ZS27 426 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms