RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 AK9Q5TCS8 1911 aa11.68□□□□□ -0.54
ATG3-203ENST00000465980 OTOFQ9HC10 1997 aa11.67□□□□□ -0.54
ATG3-203ENST00000465980 CA12O43570 354 aa11.67□□□□□ -0.54
ATG3-203ENST00000465980 CD2BP2O95400 341 aaKnown RBP11.67□□□□□ -0.54
ATG3-203ENST00000465980 MSS51Q4VC12 460 aa11.67□□□□□ -0.54
ATG3-203ENST00000465980 METTL24Q5JXM2 366 aa11.67□□□□□ -0.54
ATG3-203ENST00000465980 RASAL3Q86YV0 1011 aa11.67□□□□□ -0.54
ATG3-203ENST00000465980 APOBEC3FQ8IUX4 373 aaKnown RBP11.67□□□□□ -0.54
ATG3-203ENST00000465980 CRIPAKQ8N1N5 446 aa11.67□□□□□ -0.54
ATG3-203ENST00000465980 FAM160A2Q8N612 972 aaPredicted RBP11.67□□□□□ -0.54
ATG3-203ENST00000465980 AAASQ9NRG9 546 aa11.67□□□□□ -0.54
ATG3-203ENST00000465980 ZBTB40Q9NUA8 1239 aa11.67□□□□□ -0.54
ATG3-203ENST00000465980 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
ATG3-203ENST00000465980 AOX1Q06278 1338 aa11.66□□□□□ -0.54
ATG3-203ENST00000465980 CLRN2A0PK11 232 aa11.66□□□□□ -0.54
ATG3-203ENST00000465980 NF2P35240 595 aa11.66□□□□□ -0.54
ATG3-203ENST00000465980 RBM5P52756 815 aaKnown RBP eCLIP11.66□□□□□ -0.54
ATG3-203ENST00000465980 FOXC1Q12948 553 aa11.66□□□□□ -0.54
ATG3-203ENST00000465980 UBE4AQ14139 1066 aa11.66□□□□□ -0.54
ATG3-203ENST00000465980 RABL6Q3YEC7 729 aaPredicted RBP11.66□□□□□ -0.54
ATG3-203ENST00000465980 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
ATG3-203ENST00000465980 GPIHBP1Q8IV16 184 aa11.66□□□□□ -0.54
ATG3-203ENST00000465980 ZBED3Q96IU2 234 aaPredicted RBP11.66□□□□□ -0.54
ATG3-203ENST00000465980 USP44Q9H0E7 712 aa11.66□□□□□ -0.54
ATG3-203ENST00000465980 FZD1Q9UP38 647 aa11.66□□□□□ -0.54
ATG3-203ENST00000465980 RIPOR2Q9Y4F9 1068 aa11.66□□□□□ -0.54
ATG3-203ENST00000465980 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
ATG3-203ENST00000465980 TRPA1O75762 1119 aa11.65□□□□□ -0.54
ATG3-203ENST00000465980 HIBADHP31937 336 aaKnown RBP11.65□□□□□ -0.54
ATG3-203ENST00000465980 FKBP1BP68106 108 aa11.65□□□□□ -0.54
ATG3-203ENST00000465980 CHAF1AQ13111 956 aaPredicted RBP11.65□□□□□ -0.54
ATG3-203ENST00000465980 MFSD14BQ5SR56 506 aa11.65□□□□□ -0.54
ATG3-203ENST00000465980 BRICD5Q6PL45 260 aa11.65□□□□□ -0.54
ATG3-203ENST00000465980 VPS37DQ86XT2 251 aa11.65□□□□□ -0.54
ATG3-203ENST00000465980 ABHD8Q96I13 439 aa11.65□□□□□ -0.54
ATG3-203ENST00000465980 FAM84BQ96KN1 310 aaPredicted RBP11.65□□□□□ -0.54
ATG3-203ENST00000465980 PHOX2BQ99453 314 aa11.65□□□□□ -0.54
ATG3-203ENST00000465980 VEZTQ9HBM0 779 aa11.65□□□□□ -0.54
ATG3-203ENST00000465980 FRAT2O75474 233 aaPredicted RBP11.64□□□□□ -0.55
ATG3-203ENST00000465980 AVPP01185 164 aa11.64□□□□□ -0.55
ATG3-203ENST00000465980 UBTFL1P0CB47 393 aaPredicted RBP11.64□□□□□ -0.55
ATG3-203ENST00000465980 MMP14P50281 582 aa11.64□□□□□ -0.55
ATG3-203ENST00000465980 TDRD7Q8NHU6 1098 aaKnown RBP11.64□□□□□ -0.55
ATG3-203ENST00000465980 NLRP7Q8WX94 980 aa11.64□□□□□ -0.55
ATG3-203ENST00000465980 CSRNP1Q96S65 589 aa11.64□□□□□ -0.55
ATG3-203ENST00000465980 DEFB129Q9H1M3 183 aa11.64□□□□□ -0.55
ATG3-203ENST00000465980 TOR4AQ9NXH8 423 aa11.64□□□□□ -0.55
ATG3-203ENST00000465980 TTF2Q9UNY4 1162 aaKnown RBP11.64□□□□□ -0.55
ATG3-203ENST00000465980 PCDHB15Q9Y5E8 787 aa11.64□□□□□ -0.55
ATG3-203ENST00000465980 COL1A1P02452 1464 aaPredicted RBP11.63□□□□□ -0.55
ATG3-203ENST00000465980 FAM205AQ6ZU69 1335 aa11.63□□□□□ -0.55
ATG3-203ENST00000465980 SSC5DA1L4H1 1573 aa11.63□□□□□ -0.55
ATG3-203ENST00000465980 MYO1BO43795 1136 aa11.63□□□□□ -0.55
ATG3-203ENST00000465980 FKBP1AP62942 108 aaKnown RBP11.63□□□□□ -0.55
ATG3-203ENST00000465980 PTPN12Q05209 780 aaKnown RBP11.63□□□□□ -0.55
ATG3-203ENST00000465980 GRIK5Q16478 980 aa11.63□□□□□ -0.55
ATG3-203ENST00000465980 ARMC9Q7Z3E5 817 aa11.63□□□□□ -0.55
ATG3-203ENST00000465980 VGLL2Q8N8G2 317 aa11.63□□□□□ -0.55
ATG3-203ENST00000465980 PRMT6Q96LA8 375 aaPredicted RBP11.63□□□□□ -0.55
ATG3-203ENST00000465980 SIL1Q9H173 461 aa11.63□□□□□ -0.55
ATG3-203ENST00000465980 RNF186Q9NXI6 227 aa11.63□□□□□ -0.55
ATG3-203ENST00000465980 ANGEL1Q9UNK9 670 aaKnown RBP11.63□□□□□ -0.55
ATG3-203ENST00000465980 PDE4DIPQ5VU43 2346 aa11.63□□□□□ -0.55
ATG3-203ENST00000465980 CCDC85CA6NKD9 419 aa11.62□□□□□ -0.55
ATG3-203ENST00000465980 PDE8BO95263 885 aa11.62□□□□□ -0.55
ATG3-203ENST00000465980 DGKZQ13574 1117 aa11.62□□□□□ -0.55
ATG3-203ENST00000465980 CAVIN4Q5BKX8 364 aa11.62□□□□□ -0.55
ATG3-203ENST00000465980 MTMR14Q8NCE2 650 aa11.62□□□□□ -0.55
ATG3-203ENST00000465980 MEIS3Q99687 375 aa11.62□□□□□ -0.55
ATG3-203ENST00000465980 MCOLN1Q9GZU1 580 aa11.62□□□□□ -0.55
ATG3-203ENST00000465980 MYH2Q9UKX2 1941 aa11.62□□□□□ -0.55
ATG3-203ENST00000465980 LAMB1P07942 1786 aa11.62□□□□□ -0.55
ATG3-203ENST00000465980 TNRC18O15417 2968 aaPredicted RBP11.61□□□□□ -0.55
ATG3-203ENST00000465980 ST8SIA5O15466 376 aa11.61□□□□□ -0.55
ATG3-203ENST00000465980 GNAI3P08754 354 aa11.61□□□□□ -0.55
ATG3-203ENST00000465980 RFX5P48382 616 aaPredicted RBP11.61□□□□□ -0.55
ATG3-203ENST00000465980 PUM3Q15397 648 aaKnown RBP11.61□□□□□ -0.55
ATG3-203ENST00000465980 NBPF12Q5TAG4 269 aaPredicted RBP11.61□□□□□ -0.55
ATG3-203ENST00000465980 CENPQQ7L2Z9 268 aaPredicted RBP11.61□□□□□ -0.55
ATG3-203ENST00000465980 FBXO33Q7Z6M2 555 aa11.61□□□□□ -0.55
ATG3-203ENST00000465980 CLMNQ96JQ2 1002 aa11.61□□□□□ -0.55
ATG3-203ENST00000465980 TDRD3Q9H7E2 651 aaKnown RBP11.61□□□□□ -0.55
ATG3-203ENST00000465980 SAGE1Q9NXZ1 904 aa11.61□□□□□ -0.55
ATG3-203ENST00000465980 LRRFIP2Q9Y608 721 aaKnown RBP11.61□□□□□ -0.55
ATG3-203ENST00000465980 CENPFP49454 3210 aa11.6□□□□□ -0.55
ATG3-203ENST00000465980 EYA2O00167 538 aa11.6□□□□□ -0.55
ATG3-203ENST00000465980 ZBTB24O43167 697 aaPredicted RBP11.6□□□□□ -0.55
ATG3-203ENST00000465980 IGHDP01880 384 aa11.6□□□□□ -0.55
ATG3-203ENST00000465980 IFIT1P09914 478 aaKnown RBP11.6□□□□□ -0.55
ATG3-203ENST00000465980 SLC5A1P13866 664 aa11.6□□□□□ -0.55
ATG3-203ENST00000465980 HDAC1Q13547 482 aaPredicted RBP11.6□□□□□ -0.55
ATG3-203ENST00000465980 RASA3Q14644 834 aa11.6□□□□□ -0.55
ATG3-203ENST00000465980 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
ATG3-203ENST00000465980 Q3C1V9 767 aa11.6□□□□□ -0.55
ATG3-203ENST00000465980 CYP4X1Q8N118 509 aa11.6□□□□□ -0.55
ATG3-203ENST00000465980 RWDD1Q9H446 243 aaPredicted RBP11.6□□□□□ -0.55
ATG3-203ENST00000465980 PRDM9Q9NQV7 894 aa11.6□□□□□ -0.55
ATG3-203ENST00000465980 ZNF70Q9UC06 446 aaPredicted RBP11.6□□□□□ -0.55
ATG3-203ENST00000465980 PA2G4Q9UQ80 394 aaKnown RBP11.6□□□□□ -0.55
ATG3-203ENST00000465980 HTTP42858 3142 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms