RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 MS4A4AQ96JQ5 239 aa31.3■■■□□ 2.6
SMC4-206ENST00000465903 ARMT1Q9H993 441 aa31.3■■■□□ 2.6
SMC4-206ENST00000465903 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.3■■■□□ 2.6
SMC4-206ENST00000465903 BAZ2AQ9UIF9 1905 aaKnown RBP31.3■■■□□ 2.6
SMC4-206ENST00000465903 PHIPQ8WWQ0 1821 aa31.29■■■□□ 2.6
SMC4-206ENST00000465903 METTL16Q86W50 562 aaKnown RBP31.29■■■□□ 2.6
SMC4-206ENST00000465903 PUS7LQ9H0K6 701 aaKnown RBP31.29■■■□□ 2.6
SMC4-206ENST00000465903 CASP8AP2Q9UKL3 1982 aa31.28■■■□□ 2.6
SMC4-206ENST00000465903 TRPA1O75762 1119 aa31.28■■■□□ 2.6
SMC4-206ENST00000465903 MBD4O95243 580 aa31.28■■■□□ 2.6
SMC4-206ENST00000465903 SREBF2Q12772 1141 aa31.28■■■□□ 2.6
SMC4-206ENST00000465903 CRNKL1Q9BZJ0 848 aaKnown RBP31.28■■■□□ 2.6
SMC4-206ENST00000465903 SAGE1Q9NXZ1 904 aa31.28■■■□□ 2.6
SMC4-206ENST00000465903 TESPA1A2RU30 521 aaPredicted RBP31.27■■■□□ 2.6
SMC4-206ENST00000465903 INHBEP58166 350 aa31.27■■■□□ 2.6
SMC4-206ENST00000465903 RRP1BQ14684 758 aaKnown RBP31.27■■■□□ 2.6
SMC4-206ENST00000465903 FOXP4Q8IVH2 680 aaPredicted RBP31.27■■■□□ 2.6
SMC4-206ENST00000465903 SCYL3Q8IZE3 742 aa31.27■■■□□ 2.6
SMC4-206ENST00000465903 IRF6O14896 467 aa31.26■■■□□ 2.59
SMC4-206ENST00000465903 RNF113AO15541 343 aaKnown RBP31.26■■■□□ 2.59
SMC4-206ENST00000465903 PRKAB2O43741 272 aa31.26■■■□□ 2.59
SMC4-206ENST00000465903 CTNND1O60716 968 aaKnown RBP31.26■■■□□ 2.59
SMC4-206ENST00000465903 PPATQ06203 517 aa31.26■■■□□ 2.59
SMC4-206ENST00000465903 PPIL2Q13356 520 aa31.26■■■□□ 2.59
SMC4-206ENST00000465903 SDR42E1Q8WUS8 393 aa31.26■■■□□ 2.59
SMC4-206ENST00000465903 DNAJC18Q9H819 358 aa31.26■■■□□ 2.59
SMC4-206ENST00000465903 HERC5Q9UII4 1024 aaKnown RBP31.26■■■□□ 2.59
SMC4-206ENST00000465903 SLC4A8Q2Y0W8 1093 aa31.25■■■□□ 2.59
SMC4-206ENST00000465903 PLEKHM2Q8IWE5 1019 aa31.25■■■□□ 2.59
SMC4-206ENST00000465903 PTPN18Q99952 460 aa31.25■■■□□ 2.59
SMC4-206ENST00000465903 DCP1AQ9NPI6 582 aaPredicted RBP31.25■■■□□ 2.59
SMC4-206ENST00000465903 PRDM10Q9NQV6 1147 aa31.25■■■□□ 2.59
SMC4-206ENST00000465903 IGF2BP3O00425 579 aaKnown RBP eCLIP31.24■■■□□ 2.59
SMC4-206ENST00000465903 IFNL1Q8IU54 200 aa31.24■■■□□ 2.59
SMC4-206ENST00000465903 OSBP2Q969R2 916 aa31.24■■■□□ 2.59
SMC4-206ENST00000465903 ZFYP08048 801 aaPredicted RBP31.23■■■□□ 2.59
SMC4-206ENST00000465903 GTF2A2P52657 109 aa31.23■■■□□ 2.59
SMC4-206ENST00000465903 APPBP2Q92624 585 aa31.23■■■□□ 2.59
SMC4-206ENST00000465903 OSBPL3Q9H4L5 887 aa31.23■■■□□ 2.59
SMC4-206ENST00000465903 PTPRFP10586 1907 aa31.22■■■□□ 2.59
SMC4-206ENST00000465903 HLA-DOAP06340 250 aa31.22■■■□□ 2.59
SMC4-206ENST00000465903 PTPRAP18433 802 aa31.22■■■□□ 2.59
SMC4-206ENST00000465903 PLCD1P51178 756 aa31.22■■■□□ 2.59
SMC4-206ENST00000465903 COL13A1Q5TAT6 717 aaPredicted RBP31.22■■■□□ 2.59
SMC4-206ENST00000465903 BRI3BPQ8WY22 251 aa31.22■■■□□ 2.59
SMC4-206ENST00000465903 FSD1Q9BTV5 496 aa31.22■■■□□ 2.59
SMC4-206ENST00000465903 CAP2P40123 477 aa31.21■■■□□ 2.59
SMC4-206ENST00000465903 TTC6Q86TZ1 520 aa31.21■■■□□ 2.59
SMC4-206ENST00000465903 STRBPQ96SI9 672 aaKnown RBP31.21■■■□□ 2.59
SMC4-206ENST00000465903 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.21■■■□□ 2.59
SMC4-206ENST00000465903 KCNH4Q9UQ05 1017 aa31.21■■■□□ 2.59
SMC4-206ENST00000465903 EVX2Q03828 476 aa31.2■■■□□ 2.59
SMC4-206ENST00000465903 CRACR2BQ8N4Y2 399 aaPredicted RBP31.2■■■□□ 2.59
SMC4-206ENST00000465903 EVI5LQ96CN4 794 aa31.2■■■□□ 2.59
SMC4-206ENST00000465903 EHD4Q9H223 541 aa31.2■■■□□ 2.59
SMC4-206ENST00000465903 ATP8A2Q9NTI2 1148 aa31.2■■■□□ 2.59
SMC4-206ENST00000465903 MCM9Q9NXL9 1143 aa31.2■■■□□ 2.59
SMC4-206ENST00000465903 CCL15-CCL14A0A0B4J2E2 113 aa31.19■■■□□ 2.58
SMC4-206ENST00000465903 PDE4AP27815 886 aa31.19■■■□□ 2.58
SMC4-206ENST00000465903 CCL15Q16663 113 aa31.19■■■□□ 2.58
SMC4-206ENST00000465903 PICK1Q9NRD5 415 aa31.19■■■□□ 2.58
SMC4-206ENST00000465903 SLC4A4Q9Y6R1 1079 aa31.19■■■□□ 2.58
SMC4-206ENST00000465903 TBC1D8O95759 1140 aa31.18■■■□□ 2.58
SMC4-206ENST00000465903 POLR3DP05423 398 aaPredicted RBP31.18■■■□□ 2.58
SMC4-206ENST00000465903 JAG1P78504 1218 aa31.18■■■□□ 2.58
SMC4-206ENST00000465903 SNAPC2Q13487 334 aa31.18■■■□□ 2.58
SMC4-206ENST00000465903 CCDC84Q86UT8 332 aaPredicted RBP31.18■■■□□ 2.58
SMC4-206ENST00000465903 SEC62Q99442 399 aaKnown RBP31.18■■■□□ 2.58
SMC4-206ENST00000465903 CFHR5Q9BXR6 569 aa31.18■■■□□ 2.58
SMC4-206ENST00000465903 R3HDMLQ9H3Y0 253 aa31.18■■■□□ 2.58
SMC4-206ENST00000465903 ZHX2Q9Y6X8 837 aa31.18■■■□□ 2.58
SMC4-206ENST00000465903 M0R2C6 588 aa31.17■■■□□ 2.58
SMC4-206ENST00000465903 ALDH1A1P00352 501 aa31.17■■■□□ 2.58
SMC4-206ENST00000465903 LRRFIP1Q32MZ4 808 aaKnown RBP31.17■■■□□ 2.58
SMC4-206ENST00000465903 SERPINB13Q9UIV8 391 aa31.17■■■□□ 2.58
SMC4-206ENST00000465903 AFG3L2Q9Y4W6 797 aa31.17■■■□□ 2.58
SMC4-206ENST00000465903 CYP2D6P10635 497 aa31.16■■■□□ 2.58
SMC4-206ENST00000465903 CETPP11597 493 aa31.16■■■□□ 2.58
SMC4-206ENST00000465903 GABPAQ06546 454 aa31.16■■■□□ 2.58
SMC4-206ENST00000465903 ZMYM1Q5SVZ6 1142 aa31.16■■■□□ 2.58
SMC4-206ENST00000465903 TATDN1Q6P1N9 297 aa31.16■■■□□ 2.58
SMC4-206ENST00000465903 MYH8P13535 1937 aa31.16■■■□□ 2.58
SMC4-206ENST00000465903 CXCL11O14625 94 aa31.15■■■□□ 2.58
SMC4-206ENST00000465903 GPAA1O43292 621 aa31.15■■■□□ 2.58
SMC4-206ENST00000465903 MOGSQ13724 837 aa31.15■■■□□ 2.58
SMC4-206ENST00000465903 SHROOM1Q2M3G4 852 aaPredicted RBP31.15■■■□□ 2.58
SMC4-206ENST00000465903 TRIM34Q9BYJ4 488 aa31.15■■■□□ 2.58
SMC4-206ENST00000465903 OTUD7BQ6GQQ9 843 aa31.14■■■□□ 2.58
SMC4-206ENST00000465903 FAM43AQ8N2R8 423 aa31.14■■■□□ 2.58
SMC4-206ENST00000465903 GSG1L2A8MUP6 293 aa31.13■■■□□ 2.57
SMC4-206ENST00000465903 SMIM22K7EJ46 135 aa31.13■■■□□ 2.57
SMC4-206ENST00000465903 GDF11O95390 407 aa31.13■■■□□ 2.57
SMC4-206ENST00000465903 BTBD19C9JJ37 291 aa31.12■■■□□ 2.57
SMC4-206ENST00000465903 SHMT1P34896 483 aa31.12■■■□□ 2.57
SMC4-206ENST00000465903 C12orf60Q5U649 245 aa31.12■■■□□ 2.57
SMC4-206ENST00000465903 CYP2D7A0A087X1C5 515 aa31.11■■■□□ 2.57
SMC4-206ENST00000465903 USP17L12C9JPN9 530 aa31.11■■■□□ 2.57
SMC4-206ENST00000465903 USP17L21D6R901 530 aa31.11■■■□□ 2.57
SMC4-206ENST00000465903 CTR9Q6PD62 1173 aa31.11■■■□□ 2.57
SMC4-206ENST00000465903 A0A0G2JLL6 359 aaPredicted RBP31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms