RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 NRKQ7Z2Y5 1582 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 NRAPQ86VF7 1730 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 CD163L1Q9NR16 1453 aa6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 RPLP1P05386 114 aaKnown RBP6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 ACPPP15309 386 aa6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 EPHA1P21709 976 aa6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 MTMR3Q13615 1198 aa6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 MON2Q7Z3U7 1717 aa6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 TESK2Q96S53 571 aa6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 CARD10Q9BWT7 1032 aa6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 EP400Q96L91 3159 aa6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 BRWD3Q6RI45 1802 aa6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 SLIT2O94813 1529 aa6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 EIF3AQ14152 1382 aaKnown RBP6.8□□□□□ -1.32
EXOSC3-204ENST00000465860 GLI3P10071 1580 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 SSH2Q76I76 1423 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 ST20-MTHFSA0A0A6YYL1 179 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 CARNS1A5YM72 827 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 NFKBIEO00221 500 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 FSCN2O14926 492 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 GLB1P16278 677 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 MZF1P28698 734 aaPredicted RBP6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 CD68P34810 354 aaPredicted RBP6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 LRP8Q14114 963 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 C8orf34Q49A92 452 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 ADAM19Q9H013 955 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 RGPD5Q99666 1765 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 NWD2Q9ULI1 1742 aa6.79□□□□□ -1.32
EXOSC3-204ENST00000465860 EVC2Q86UK5 1308 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 MYOM1P52179 1685 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 RGS12O14924 1447 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 ATRNO75882 1429 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 USP6P35125 1406 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 COL14A1Q05707 1796 aaKnown RBP6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 FAM83GA6ND36 823 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 TRPA1O75762 1119 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 PCSK2P16519 638 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 PTPRAP18433 802 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 CES1P23141 567 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 ZNF772Q68DY9 489 aaPredicted RBP6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 CCER1Q8TC90 406 aaPredicted RBP6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 UBL7Q96S82 380 aaPredicted RBP6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 CHRDQ9H2X0 955 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 POLIQ9UNA4 740 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 ARHGEF10O15013 1369 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 SBNO2Q9Y2G9 1366 aa6.78□□□□□ -1.32
EXOSC3-204ENST00000465860 CLSPNQ9HAW4 1339 aa6.77□□□□□ -1.32
EXOSC3-204ENST00000465860 CPSF1Q10570 1443 aaKnown RBP6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 DDX3YO15523 660 aaKnown RBP6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 HYAL3O43820 417 aaPredicted RBP6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 PHLDB3Q6NSJ2 640 aa6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 FAM117BQ6P1L5 589 aa6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 ACAD11Q709F0 780 aa6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 KLHL23Q8NBE8 558 aa6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 HHIPQ96QV1 700 aa6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 DZANK1Q9NVP4 752 aa6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 LMO7Q8WWI1 1683 aa6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 COL18A1P39060 1754 aa6.77□□□□□ -1.33
EXOSC3-204ENST00000465860 ADAM11O75078 769 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 NPR3P17342 541 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 FSTP19883 344 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 RXRBP28702 533 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 ALKBH2Q6NS38 261 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 KIAA1211Q6ZU35 1233 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 FOXD4L4Q8WXT5 416 aaPredicted RBP6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 KLHDC7BQ96G42 594 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 SLC12A5Q9H2X9 1139 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 RNF112Q9ULX5 631 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 USP47Q96K76 1375 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 USP54Q70EL1 1684 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 SLIT3O75094 1523 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 USP19O94966 1318 aa6.76□□□□□ -1.33
EXOSC3-204ENST00000465860 CAMTA1Q9Y6Y1 1673 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 CDK12Q9NYV4 1490 aaPredicted RBP6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 KIAA0232Q92628 1395 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 H3BRJ5 948 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 ZC3H6P61129 1189 aaKnown RBP6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 CHRNA2Q15822 529 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 DUOXA2Q1HG44 320 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 ARMC10Q8N2F6 343 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 TTC16Q8NEE8 873 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 UBASH3BQ8TF42 649 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 SEC31BQ9NQW1 1179 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 TTC21BQ7Z4L5 1316 aa6.75□□□□□ -1.33
EXOSC3-204ENST00000465860 LTN1O94822 1766 aa6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 A0A1W2PP64 1363 aa6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 KTN1Q86UP2 1357 aaKnown RBP6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 FAM177BA6PVY3 158 aa6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 PDE2AO00408 941 aaPredicted RBP6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 EREGO14944 169 aa6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 RBM6P78332 1123 aaKnown RBP6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 NBPF11Q86T75 865 aa6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 UNC5CLQ8IV45 518 aa6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 PMEPA1Q969W9 287 aa6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 BTG4Q9NY30 223 aa6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 TIMELESSQ9UNS1 1208 aa6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 RAXQ9Y2V3 346 aa6.74□□□□□ -1.33
EXOSC3-204ENST00000465860 NFAT5O94916 1531 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 FZD6O60353 706 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms