RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SKAP1Q86WV1 359 aa14.89□□□□□ -0.03
CHPF2-202ENST00000465601 FOXP4Q8IVH2 680 aaPredicted RBP14.89□□□□□ -0.03
CHPF2-202ENST00000465601 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
CHPF2-202ENST00000465601 WNK4Q96J92 1243 aa14.89□□□□□ -0.03
CHPF2-202ENST00000465601 DCP1AQ9NPI6 582 aaPredicted RBP14.89□□□□□ -0.03
CHPF2-202ENST00000465601 MCM9Q9NXL9 1143 aa14.89□□□□□ -0.03
CHPF2-202ENST00000465601 GPAA1O43292 621 aa14.88□□□□□ -0.03
CHPF2-202ENST00000465601 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
CHPF2-202ENST00000465601 HLA-DOAP06340 250 aa14.88□□□□□ -0.03
CHPF2-202ENST00000465601 TTC22Q5TAA0 569 aa14.88□□□□□ -0.03
CHPF2-202ENST00000465601 ATP8A2Q9NTI2 1148 aa14.88□□□□□ -0.03
CHPF2-202ENST00000465601 SNCAIPQ9Y6H5 919 aa14.88□□□□□ -0.03
CHPF2-202ENST00000465601 CYP2D6P10635 497 aa14.87□□□□□ -0.03
CHPF2-202ENST00000465601 GJA5P36382 358 aa14.87□□□□□ -0.03
CHPF2-202ENST00000465601 PLCD1P51178 756 aa14.87□□□□□ -0.03
CHPF2-202ENST00000465601 EVX2Q03828 476 aa14.87□□□□□ -0.03
CHPF2-202ENST00000465601 ERICH6BQ5W0A0 696 aa14.87□□□□□ -0.03
CHPF2-202ENST00000465601 TTC6Q86TZ1 520 aa14.87□□□□□ -0.03
CHPF2-202ENST00000465601 CRACR2BQ8N4Y2 399 aaPredicted RBP14.87□□□□□ -0.03
CHPF2-202ENST00000465601 OPTNQ96CV9 577 aa14.87□□□□□ -0.03
CHPF2-202ENST00000465601 FAM227BQ96M60 508 aa14.87□□□□□ -0.03
CHPF2-202ENST00000465601 TRIM34Q9BYJ4 488 aa14.87□□□□□ -0.03
CHPF2-202ENST00000465601 PPP4R2Q9NY27 417 aa14.87□□□□□ -0.03
CHPF2-202ENST00000465601 HERC5Q9UII4 1024 aaKnown RBP14.87□□□□□ -0.03
CHPF2-202ENST00000465601 GSG1L2A8MUP6 293 aa14.86□□□□□ -0.03
CHPF2-202ENST00000465601 GSPT1P15170 499 aaKnown RBP14.86□□□□□ -0.03
CHPF2-202ENST00000465601 SDSP20132 328 aa14.86□□□□□ -0.03
CHPF2-202ENST00000465601 MAP2K1Q02750 393 aaPredicted RBP14.86□□□□□ -0.03
CHPF2-202ENST00000465601 RRP1BQ14684 758 aaKnown RBP14.86□□□□□ -0.03
CHPF2-202ENST00000465601 CCDC129Q6ZRS4 1044 aa14.86□□□□□ -0.03
CHPF2-202ENST00000465601 METTL16Q86W50 562 aaKnown RBP14.86□□□□□ -0.03
CHPF2-202ENST00000465601 OTUD5Q96G74 571 aa14.86□□□□□ -0.03
CHPF2-202ENST00000465601 DNAJC18Q9H819 358 aa14.86□□□□□ -0.03
CHPF2-202ENST00000465601 CYP2D7A0A087X1C5 515 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 A0A0D9SFI3 127 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 USP17L12C9JPN9 530 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 USP17L21D6R901 530 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 CTNND1O60716 968 aaKnown RBP14.85□□□□□ -0.03
CHPF2-202ENST00000465601 APPP05067 770 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 NMIQ13287 307 aaPredicted RBP14.85□□□□□ -0.03
CHPF2-202ENST00000465601 NOL9Q5SY16 702 aaKnown RBP14.85□□□□□ -0.03
CHPF2-202ENST00000465601 TICAM2Q86XR7 235 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 ERO1BQ86YB8 467 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 SCYL3Q8IZE3 742 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 HELLSQ9NRZ9 838 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 WBP1LQ9NX94 342 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 SERPINB13Q9UIV8 391 aa14.85□□□□□ -0.03
CHPF2-202ENST00000465601 THSD7BQ9C0I4 1608 aa14.84□□□□□ -0.03
CHPF2-202ENST00000465601 DDX60LQ5H9U9 1706 aaKnown RBP14.84□□□□□ -0.03
CHPF2-202ENST00000465601 SPDYE5A6NIY4 337 aa14.84□□□□□ -0.03
CHPF2-202ENST00000465601 PATL2C9JE40 543 aaKnown RBP14.84□□□□□ -0.03
CHPF2-202ENST00000465601 SMIM22K7EJ46 135 aa14.84□□□□□ -0.03
CHPF2-202ENST00000465601 HSPA1AP0DMV8 641 aaKnown RBP14.84□□□□□ -0.03
CHPF2-202ENST00000465601 HSPA1BP0DMV9 641 aaKnown RBP14.84□□□□□ -0.03
CHPF2-202ENST00000465601 ZBTB48P10074 688 aaPredicted RBP14.84□□□□□ -0.03
CHPF2-202ENST00000465601 GNAT2P19087 354 aa14.84□□□□□ -0.03
CHPF2-202ENST00000465601 MCMDC2Q4G0Z9 681 aa14.84□□□□□ -0.03
CHPF2-202ENST00000465601 CTR9Q6PD62 1173 aa14.84□□□□□ -0.03
CHPF2-202ENST00000465601 EHD4Q9H223 541 aa14.84□□□□□ -0.03
CHPF2-202ENST00000465601 PICK1Q9NRD5 415 aa14.84□□□□□ -0.03
CHPF2-202ENST00000465601 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.84□□□□□ -0.03
CHPF2-202ENST00000465601 ATAD5Q96QE3 1844 aa14.84□□□□□ -0.03
CHPF2-202ENST00000465601 DOCK1Q14185 1865 aa14.84□□□□□ -0.03
CHPF2-202ENST00000465601 IRF6O14896 467 aa14.83□□□□□ -0.04
CHPF2-202ENST00000465601 PTPRAP18433 802 aa14.83□□□□□ -0.04
CHPF2-202ENST00000465601 CAP2P40123 477 aa14.83□□□□□ -0.04
CHPF2-202ENST00000465601 PPATQ06203 517 aa14.83□□□□□ -0.04
CHPF2-202ENST00000465601 C12orf60Q5U649 245 aa14.83□□□□□ -0.04
CHPF2-202ENST00000465601 GIMAP6Q6P9H5 292 aa14.83□□□□□ -0.04
CHPF2-202ENST00000465601 CCDC84Q86UT8 332 aaPredicted RBP14.83□□□□□ -0.04
CHPF2-202ENST00000465601 DYNLL2Q96FJ2 89 aa14.83□□□□□ -0.04
CHPF2-202ENST00000465601 BEGAINQ9BUH8 593 aa14.83□□□□□ -0.04
CHPF2-202ENST00000465601 EPB41L4AQ9HCS5 686 aaPredicted RBP14.83□□□□□ -0.04
CHPF2-202ENST00000465601 DIAPH3Q9NSV4 1193 aa14.83□□□□□ -0.04
CHPF2-202ENST00000465601 MYH8P13535 1937 aa14.83□□□□□ -0.04
CHPF2-202ENST00000465601 MANSC4A6NHS7 340 aaPredicted RBP14.82□□□□□ -0.04
CHPF2-202ENST00000465601 GDF11O95390 407 aa14.82□□□□□ -0.04
CHPF2-202ENST00000465601 TM4SF4P48230 202 aa14.82□□□□□ -0.04
CHPF2-202ENST00000465601 TDO2P48775 406 aa14.82□□□□□ -0.04
CHPF2-202ENST00000465601 JAG1P78504 1218 aa14.82□□□□□ -0.04
CHPF2-202ENST00000465601 GABPAQ06546 454 aa14.82□□□□□ -0.04
CHPF2-202ENST00000465601 PPIL2Q13356 520 aa14.82□□□□□ -0.04
CHPF2-202ENST00000465601 SHROOM1Q2M3G4 852 aaPredicted RBP14.82□□□□□ -0.04
CHPF2-202ENST00000465601 CWC27Q6UX04 472 aaKnown RBP14.82□□□□□ -0.04
CHPF2-202ENST00000465601 AMOTL1Q8IY63 956 aa14.82□□□□□ -0.04
CHPF2-202ENST00000465601 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
CHPF2-202ENST00000465601 IFNL3Q8IZI9 196 aa14.82□□□□□ -0.04
CHPF2-202ENST00000465601 MS4A4AQ96JQ5 239 aa14.82□□□□□ -0.04
CHPF2-202ENST00000465601 ZHX2Q9Y6X8 837 aa14.82□□□□□ -0.04
CHPF2-202ENST00000465601 PHIPQ8WWQ0 1821 aa14.81□□□□□ -0.04
CHPF2-202ENST00000465601 MINDY4BA8MYZ0 360 aa14.81□□□□□ -0.04
CHPF2-202ENST00000465601 HIP1O00291 1037 aa14.81□□□□□ -0.04
CHPF2-202ENST00000465601 SHMT1P34896 483 aa14.81□□□□□ -0.04
CHPF2-202ENST00000465601 GTF2A2P52657 109 aa14.81□□□□□ -0.04
CHPF2-202ENST00000465601 SREBF2Q12772 1141 aa14.81□□□□□ -0.04
CHPF2-202ENST00000465601 SBK1Q52WX2 424 aa14.81□□□□□ -0.04
CHPF2-202ENST00000465601 VPS53Q5VIR6 699 aa14.81□□□□□ -0.04
CHPF2-202ENST00000465601 TATDN1Q6P1N9 297 aa14.81□□□□□ -0.04
CHPF2-202ENST00000465601 ZNF589Q86UQ0 364 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms