RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 SLURP2P0DP57 97 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 GABPAQ06546 454 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 RASA3Q14644 834 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 USP50Q70EL3 339 aaPredicted RBP18.06■□□□□ 0.48
CRAT-208ENST00000464290 ZSCAN29Q8IWY8 852 aaPredicted RBP18.06■□□□□ 0.48
CRAT-208ENST00000464290 CDAN1Q8IWY9 1227 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 MB21D2Q8IYB1 491 aaPredicted RBP18.06■□□□□ 0.48
CRAT-208ENST00000464290 SLC44A5Q8NCS7 719 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 NCOA7Q8NI08 942 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 TMEM39BQ9GZU3 492 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 RNF41Q9H4P4 317 aaPredicted RBP18.06■□□□□ 0.48
CRAT-208ENST00000464290 GGA3Q9NZ52 723 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 SCN4AP35499 1836 aa18.06■□□□□ 0.48
CRAT-208ENST00000464290 B4E1Z4 1266 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 PRDM1O75626 825 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 HLA-DOAP06340 250 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 PCP11498 1178 aaKnown RBP18.05■□□□□ 0.48
CRAT-208ENST00000464290 RPS6KB1P23443 525 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 TNNI2P48788 182 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 NEK4P51957 841 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 EXOSC10Q01780 885 aaKnown RBP18.05■□□□□ 0.48
CRAT-208ENST00000464290 BLOC1S2Q6QNY1 142 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 C16orf86Q6ZW13 317 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 RUFY3Q7L099 469 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 PI4KBQ9UBF8 816 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 CYP46A1Q9Y6A2 500 aa18.05■□□□□ 0.48
CRAT-208ENST00000464290 ORC4O43929 436 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 CDK8P49336 464 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 PDE4BQ07343 736 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 TRDNQ13061 729 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 TNFAIP1Q13829 316 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 RRP12Q5JTH9 1297 aaKnown RBP18.04■□□□□ 0.48
CRAT-208ENST00000464290 CYB5R4Q7L1T6 521 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 DHX32Q7L7V1 743 aaKnown RBP18.04■□□□□ 0.48
CRAT-208ENST00000464290 RALYLQ86SE5 291 aaKnown RBP18.04■□□□□ 0.48
CRAT-208ENST00000464290 METTL16Q86W50 562 aaKnown RBP18.04■□□□□ 0.48
CRAT-208ENST00000464290 APOBEC3FQ8IUX4 373 aaKnown RBP18.04■□□□□ 0.48
CRAT-208ENST00000464290 TCEANC2Q96MN5 208 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 TEPSINQ96N21 525 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 TTC14Q96N46 770 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 KRT23Q9C075 422 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 DEFB129Q9H1M3 183 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 EHD4Q9H223 541 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 CNNM2Q9H8M5 875 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 SERPINB13Q9UIV8 391 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 SIPA1L1O43166 1804 aa18.04■□□□□ 0.48
CRAT-208ENST00000464290 POLR2AP24928 1970 aaKnown RBP18.04■□□□□ 0.48
CRAT-208ENST00000464290 PITPNM2Q9BZ72 1349 aa18.03■□□□□ 0.48
CRAT-208ENST00000464290 HMGB1P09429 215 aaKnown RBP18.03■□□□□ 0.48
CRAT-208ENST00000464290 ANTXR2P58335 489 aa18.03■□□□□ 0.48
CRAT-208ENST00000464290 CHST3Q7LGC8 479 aa18.03■□□□□ 0.48
CRAT-208ENST00000464290 FOXP4Q8IVH2 680 aaPredicted RBP18.03■□□□□ 0.48
CRAT-208ENST00000464290 CSRNP1Q96S65 589 aa18.03■□□□□ 0.48
CRAT-208ENST00000464290 DNAJC18Q9H819 358 aa18.03■□□□□ 0.48
CRAT-208ENST00000464290 RRAGCQ9HB90 399 aa18.03■□□□□ 0.48
CRAT-208ENST00000464290 TOMM22Q9NS69 142 aa18.03■□□□□ 0.48
CRAT-208ENST00000464290 FAM196BA6NMK8 535 aa18.02■□□□□ 0.48
CRAT-208ENST00000464290 KDM4AO75164 1064 aa18.02■□□□□ 0.48
CRAT-208ENST00000464290 CD2BP2O95400 341 aaKnown RBP18.02■□□□□ 0.48
CRAT-208ENST00000464290 MCM5P33992 734 aa18.02■□□□□ 0.48
CRAT-208ENST00000464290 SHMT1P34896 483 aa18.02■□□□□ 0.48
CRAT-208ENST00000464290 ZC3H15Q8WU90 426 aaKnown RBP18.02■□□□□ 0.48
CRAT-208ENST00000464290 LRRC2Q9BYS8 371 aa18.02■□□□□ 0.48
CRAT-208ENST00000464290 MKNK2Q9HBH9 465 aa18.02■□□□□ 0.48
CRAT-208ENST00000464290 PDRG1Q9NUG6 133 aa18.02■□□□□ 0.48
CRAT-208ENST00000464290 ZSWIM5Q9P217 1185 aa18.02■□□□□ 0.48
CRAT-208ENST00000464290 PRC1O43663 620 aa18.01■□□□□ 0.47
CRAT-208ENST00000464290 RANBP6O60518 1105 aaKnown RBP18.01■□□□□ 0.47
CRAT-208ENST00000464290 VEGFAP15692 232 aaPredicted RBP18.01■□□□□ 0.47
CRAT-208ENST00000464290 RASA1P20936 1047 aa18.01■□□□□ 0.47
CRAT-208ENST00000464290 EAPPQ56P03 285 aaPredicted RBP18.01■□□□□ 0.47
CRAT-208ENST00000464290 ESR2Q92731 530 aa18.01■□□□□ 0.47
CRAT-208ENST00000464290 SWAP70Q9UH65 585 aa18.01■□□□□ 0.47
CRAT-208ENST00000464290 FAM47AQ5JRC9 791 aa18■□□□□ 0.47
CRAT-208ENST00000464290 PRAMEF18Q5VWM3 479 aa18■□□□□ 0.47
CRAT-208ENST00000464290 PNMA8AQ86V59 439 aaPredicted RBP18■□□□□ 0.47
CRAT-208ENST00000464290 ZNF444Q8N0Y2 327 aaPredicted RBP18■□□□□ 0.47
CRAT-208ENST00000464290 CRACR2BQ8N4Y2 399 aaPredicted RBP18■□□□□ 0.47
CRAT-208ENST00000464290 DCPSQ96C86 337 aaKnown RBP18■□□□□ 0.47
CRAT-208ENST00000464290 ALDH8A1Q9H2A2 487 aaPredicted RBP18■□□□□ 0.47
CRAT-208ENST00000464290 ZNF287Q9HBT7 754 aa18■□□□□ 0.47
CRAT-208ENST00000464290 ST18O60284 1047 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 POTEIP0CG38 1075 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 POTEJP0CG39 1038 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 AK2P54819 239 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 TFAP4Q01664 338 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 MAP3K10Q02779 954 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 NBPF12Q5TAG4 269 aaPredicted RBP17.99■□□□□ 0.47
CRAT-208ENST00000464290 TATDN1Q6P1N9 297 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 DLK2Q6UY11 383 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 Q6ZUG5 572 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 ZNF526Q8TF50 670 aaPredicted RBP17.99■□□□□ 0.47
CRAT-208ENST00000464290 SNX21Q969T3 373 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 NMRK2Q9NPI5 230 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 GPHNQ9NQX3 736 aaPredicted RBP17.99■□□□□ 0.47
CRAT-208ENST00000464290 HERC5Q9UII4 1024 aaKnown RBP17.99■□□□□ 0.47
CRAT-208ENST00000464290 TAOK2Q9UL54 1235 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 PPP2R3BQ9Y5P8 575 aa17.99■□□□□ 0.47
CRAT-208ENST00000464290 WDR19Q8NEZ3 1342 aa17.98■□□□□ 0.47
CRAT-208ENST00000464290 ADM5C9JUS6 153 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms