RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 NT5C1AQ9BXI3 368 aa8.77□□□□□ -1.01
SSR3-203ENST00000464138 SPAG9O60271 1321 aaKnown RBP8.77□□□□□ -1.01
SSR3-203ENST00000464138 CCDC18Q5T9S5 1454 aa8.77□□□□□ -1.01
SSR3-203ENST00000464138 ATP7AQ04656 1500 aa8.76□□□□□ -1.01
SSR3-203ENST00000464138 SPDYE3A6NKU9 549 aa8.76□□□□□ -1.01
SSR3-203ENST00000464138 GREM1O60565 184 aa8.76□□□□□ -1.01
SSR3-203ENST00000464138 TRIM37O94972 964 aa8.76□□□□□ -1.01
SSR3-203ENST00000464138 GSTP1P09211 210 aaKnown RBP8.76□□□□□ -1.01
SSR3-203ENST00000464138 ZNF252P-AS1Q0IIN9 211 aa8.76□□□□□ -1.01
SSR3-203ENST00000464138 COL9A3Q14050 684 aaPredicted RBP8.76□□□□□ -1.01
SSR3-203ENST00000464138 FBXL19Q6PCT2 694 aa8.76□□□□□ -1.01
SSR3-203ENST00000464138 DMRTC2Q8IXT2 367 aaPredicted RBP8.76□□□□□ -1.01
SSR3-203ENST00000464138 GOLM1Q8NBJ4 401 aa8.76□□□□□ -1.01
SSR3-203ENST00000464138 WHAMMQ8TF30 809 aa8.76□□□□□ -1.01
SSR3-203ENST00000464138 TANGO6Q9C0B7 1094 aa8.76□□□□□ -1.01
SSR3-203ENST00000464138 A2MP01023 1474 aa8.76□□□□□ -1.01
SSR3-203ENST00000464138 ADGBQ8N7X0 1667 aa8.75□□□□□ -1.01
SSR3-203ENST00000464138 INO80Q9ULG1 1556 aaPredicted RBP8.75□□□□□ -1.01
SSR3-203ENST00000464138 KIAA1107Q9UPP5 1409 aa8.75□□□□□ -1.01
SSR3-203ENST00000464138 GARTP22102 1010 aa8.75□□□□□ -1.01
SSR3-203ENST00000464138 FAM160A1Q05DH4 1040 aa8.75□□□□□ -1.01
SSR3-203ENST00000464138 COL9A2Q14055 689 aaPredicted RBP8.75□□□□□ -1.01
SSR3-203ENST00000464138 SETDB1Q15047 1291 aa8.75□□□□□ -1.01
SSR3-203ENST00000464138 POU4F3Q15319 338 aa8.75□□□□□ -1.01
SSR3-203ENST00000464138 TRAPPC3LQ5T215 181 aa8.75□□□□□ -1.01
SSR3-203ENST00000464138 PDZD3Q86UT5 571 aa8.75□□□□□ -1.01
SSR3-203ENST00000464138 SEC16BQ96JE7 1060 aa8.75□□□□□ -1.01
SSR3-203ENST00000464138 NEURL4Q96JN8 1562 aa8.74□□□□□ -1.01
SSR3-203ENST00000464138 DNAJA1P31689 397 aaKnown RBP8.74□□□□□ -1.01
SSR3-203ENST00000464138 RAC1P63000 192 aa8.74□□□□□ -1.01
SSR3-203ENST00000464138 FAM196AQ6ZSG2 479 aa8.74□□□□□ -1.01
SSR3-203ENST00000464138 STK35Q8TDR2 534 aa8.74□□□□□ -1.01
SSR3-203ENST00000464138 GATAD2BQ8WXI9 593 aa8.74□□□□□ -1.01
SSR3-203ENST00000464138 CARD10Q9BWT7 1032 aa8.74□□□□□ -1.01
SSR3-203ENST00000464138 KRT82Q9NSB4 513 aa8.74□□□□□ -1.01
SSR3-203ENST00000464138 PRKAG2Q9UGJ0 569 aa8.74□□□□□ -1.01
SSR3-203ENST00000464138 PLEKHH2Q8IVE3 1493 aa8.74□□□□□ -1.01
SSR3-203ENST00000464138 DEPDC5O75140 1603 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 ALKQ9UM73 1620 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 CASKIN1Q8WXD9 1431 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 HOXB4P17483 251 aaPredicted RBP8.73□□□□□ -1.01
SSR3-203ENST00000464138 MAOBP27338 520 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 CD68P34810 354 aaPredicted RBP8.73□□□□□ -1.01
SSR3-203ENST00000464138 APOBRQ0VD83 1088 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 LCE2AQ5TA79 106 aaPredicted RBP8.73□□□□□ -1.01
SSR3-203ENST00000464138 MAP1SQ66K74 1059 aaPredicted RBP8.73□□□□□ -1.01
SSR3-203ENST00000464138 HGSNATQ68CP4 663 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 GRIN3AQ8TCU5 1115 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 ARMC5Q96C12 935 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 KLHDC7BQ96G42 594 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 EAF1Q96JC9 268 aaPredicted RBP8.73□□□□□ -1.01
SSR3-203ENST00000464138 LRRC3Q9BY71 257 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 NRSN2Q9GZP1 204 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 PCDHB5Q9Y5E4 795 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 SYCP2Q9BX26 1530 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 VWDEQ8N2E2 1590 aa8.73□□□□□ -1.01
SSR3-203ENST00000464138 MED14O60244 1454 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 FAM135AQ9P2D6 1515 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 GNB5O14775 395 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 WIPF1O43516 503 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 IGSF3O75054 1194 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 BPNT1O95861 308 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 ATF4P18848 351 aaPredicted RBP8.72□□□□□ -1.01
SSR3-203ENST00000464138 ATP2B1P20020 1258 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 HNRNPMP52272 730 aaKnown RBP eCLIP8.72□□□□□ -1.01
SSR3-203ENST00000464138 MPP2Q14168 576 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 RASIP1Q5U651 963 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 GGT6Q6P531 493 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 FBXO11Q86XK2 927 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 UBXN4Q92575 508 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 JARID2Q92833 1246 aaPredicted RBP8.72□□□□□ -1.01
SSR3-203ENST00000464138 KCNB2Q92953 911 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 CACNA2D2Q9NY47 1150 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 MKL2Q9ULH7 1088 aa8.72□□□□□ -1.01
SSR3-203ENST00000464138 GPATCH8Q9UKJ3 1502 aaKnown RBP8.71□□□□□ -1.01
SSR3-203ENST00000464138 ARHGEF15O94989 841 aa8.71□□□□□ -1.02
SSR3-203ENST00000464138 F13A1P00488 732 aa8.71□□□□□ -1.02
SSR3-203ENST00000464138 CWF19L2Q2TBE0 894 aaKnown RBP8.71□□□□□ -1.02
SSR3-203ENST00000464138 GALNT11Q8NCW6 608 aa8.71□□□□□ -1.02
SSR3-203ENST00000464138 NKD1Q969G9 470 aa8.71□□□□□ -1.02
SSR3-203ENST00000464138 USP26Q9BXU7 913 aa8.71□□□□□ -1.02
SSR3-203ENST00000464138 STRIP2Q9ULQ0 834 aa8.71□□□□□ -1.02
SSR3-203ENST00000464138 A0A0A0MRY4 1105 aa8.7□□□□□ -1.02
SSR3-203ENST00000464138 FAM221AA4D161 298 aa8.7□□□□□ -1.02
SSR3-203ENST00000464138 TM4SF5O14894 197 aa8.7□□□□□ -1.02
SSR3-203ENST00000464138 CILPO75339 1184 aa8.7□□□□□ -1.02
SSR3-203ENST00000464138 DEAF1O75398 565 aaPredicted RBP8.7□□□□□ -1.02
SSR3-203ENST00000464138 NLRP12P59046 1061 aa8.7□□□□□ -1.02
SSR3-203ENST00000464138 SEPT6Q14141 434 aa8.7□□□□□ -1.02
SSR3-203ENST00000464138 BNC2Q6ZN30 1099 aaPredicted RBP8.7□□□□□ -1.02
SSR3-203ENST00000464138 FMR1NBQ8N0W7 255 aaPredicted RBP8.7□□□□□ -1.02
SSR3-203ENST00000464138 THEMISQ8N1K5 641 aaPredicted RBP8.7□□□□□ -1.02
SSR3-203ENST00000464138 GAL3ST3Q96A11 431 aa8.7□□□□□ -1.02
SSR3-203ENST00000464138 ACSBG1Q96GR2 724 aa8.7□□□□□ -1.02
SSR3-203ENST00000464138 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.7□□□□□ -1.021e-13■□□□□ 8.2
SSR3-203ENST00000464138 UBP1Q9NZI7 540 aa8.7□□□□□ -1.02
SSR3-203ENST00000464138 NOP53Q9NZM5 478 aaKnown RBP8.7□□□□□ -1.02
SSR3-203ENST00000464138 TNRQ92752 1358 aa8.7□□□□□ -1.02
SSR3-203ENST00000464138 SYNMO15061 1565 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms