RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ERICH6Q7L0X2 663 aa17.95■□□□□ 0.46
SMC1A-204ENST00000463684 TDHQ8IZJ6 230 aa17.95■□□□□ 0.46
SMC1A-204ENST00000463684 STXBP5LQ9Y2K9 1186 aa17.95■□□□□ 0.46
SMC1A-204ENST00000463684 MYH13Q9UKX3 1938 aa17.94■□□□□ 0.46
SMC1A-204ENST00000463684 GPR75-ASB3A0A0A6YYF3 556 aa17.94■□□□□ 0.46
SMC1A-204ENST00000463684 NPM3O75607 178 aaKnown RBP17.94■□□□□ 0.46
SMC1A-204ENST00000463684 MAGEA10P43363 369 aaPredicted RBP17.94■□□□□ 0.46
SMC1A-204ENST00000463684 HMGCS2P54868 508 aa17.94■□□□□ 0.46
SMC1A-204ENST00000463684 TIMM10P62072 90 aa17.94■□□□□ 0.46
SMC1A-204ENST00000463684 TRIM32Q13049 653 aa17.94■□□□□ 0.46
SMC1A-204ENST00000463684 Q7L0L9 218 aa17.94■□□□□ 0.46
SMC1A-204ENST00000463684 UBE2OQ9C0C9 1292 aaKnown RBP17.94■□□□□ 0.46
SMC1A-204ENST00000463684 ASCC2Q9H1I8 757 aaPredicted RBP17.94■□□□□ 0.46
SMC1A-204ENST00000463684 PDS5AQ29RF7 1337 aaKnown RBP17.94■□□□□ 0.46
SMC1A-204ENST00000463684 DOCK2Q92608 1830 aa17.93■□□□□ 0.46
SMC1A-204ENST00000463684 FAM196BA6NMK8 535 aa17.93■□□□□ 0.46
SMC1A-204ENST00000463684 USP17L5A8MUK1 530 aa17.93■□□□□ 0.46
SMC1A-204ENST00000463684 MAP4K4O95819 1239 aaPredicted RBP17.93■□□□□ 0.46
SMC1A-204ENST00000463684 LDHCP07864 332 aa17.93■□□□□ 0.46
SMC1A-204ENST00000463684 MECOMQ03112 1051 aa17.93■□□□□ 0.46
SMC1A-204ENST00000463684 AS3MTQ9HBK9 375 aa17.93■□□□□ 0.46
SMC1A-204ENST00000463684 OGDHLQ9ULD0 1010 aa17.93■□□□□ 0.46
SMC1A-204ENST00000463684 PA2G4Q9UQ80 394 aaKnown RBP17.93■□□□□ 0.46
SMC1A-204ENST00000463684 CYP2B6P20813 491 aa17.92■□□□□ 0.46
SMC1A-204ENST00000463684 CAP2P40123 477 aa17.92■□□□□ 0.46
SMC1A-204ENST00000463684 RHBDL3P58872 404 aa17.92■□□□□ 0.46
SMC1A-204ENST00000463684 GSTO1P78417 241 aa17.92■□□□□ 0.46
SMC1A-204ENST00000463684 MTMR10Q9NXD2 777 aa17.92■□□□□ 0.46
SMC1A-204ENST00000463684 AKAP2Q9Y2D5 859 aa17.92■□□□□ 0.46
SMC1A-204ENST00000463684 IRX3P78415 501 aaPredicted RBP17.91■□□□□ 0.46
SMC1A-204ENST00000463684 MVPQ14764 893 aaKnown RBP17.91■□□□□ 0.46
SMC1A-204ENST00000463684 SH3D19Q5HYK7 790 aa17.91■□□□□ 0.46
SMC1A-204ENST00000463684 TRIB2Q92519 343 aa17.91■□□□□ 0.46
SMC1A-204ENST00000463684 NUDT12Q9BQG2 462 aa17.91■□□□□ 0.46
SMC1A-204ENST00000463684 COPRSQ9NQ92 184 aa17.91■□□□□ 0.46
SMC1A-204ENST00000463684 MORF4L1Q9UBU8 362 aa17.91■□□□□ 0.46
SMC1A-204ENST00000463684 ZNF521Q96K83 1311 aa17.91■□□□□ 0.46
SMC1A-204ENST00000463684 DOCK1Q14185 1865 aa17.9■□□□□ 0.46
SMC1A-204ENST00000463684 E9PSI1 815 aa17.9■□□□□ 0.46
SMC1A-204ENST00000463684 PRKAR2AP13861 404 aaKnown RBP17.9■□□□□ 0.46
SMC1A-204ENST00000463684 ALDH1L2Q3SY69 923 aa17.9■□□□□ 0.46
SMC1A-204ENST00000463684 CCAR1Q8IX12 1150 aaKnown RBP17.9■□□□□ 0.46
SMC1A-204ENST00000463684 TRMT44Q8IYL2 757 aaKnown RBP17.9■□□□□ 0.46
SMC1A-204ENST00000463684 XAGE2Q96GT9 111 aa17.9■□□□□ 0.46
SMC1A-204ENST00000463684 TMOD4Q9NZQ9 345 aa17.9■□□□□ 0.46
SMC1A-204ENST00000463684 A0A1B0GUL7 405 aa17.89■□□□□ 0.45
SMC1A-204ENST00000463684 XRCC5P13010 732 aaKnown RBP17.89■□□□□ 0.45
SMC1A-204ENST00000463684 PDE3AQ14432 1141 aa17.89■□□□□ 0.45
SMC1A-204ENST00000463684 MAP3K21Q5TCX8 1036 aa17.89■□□□□ 0.45
SMC1A-204ENST00000463684 GPRC5AQ8NFJ5 357 aa17.89■□□□□ 0.45
SMC1A-204ENST00000463684 SOCS4Q8WXH5 440 aa17.89■□□□□ 0.45
SMC1A-204ENST00000463684 SMC4Q9NTJ3 1288 aa17.89■□□□□ 0.45
SMC1A-204ENST00000463684 HERC5Q9UII4 1024 aaKnown RBP17.89■□□□□ 0.45
SMC1A-204ENST00000463684 MYH2Q9UKX2 1941 aa17.89■□□□□ 0.45
SMC1A-204ENST00000463684 GORABQ5T7V8 394 aa17.88■□□□□ 0.45
SMC1A-204ENST00000463684 NEUROD6Q96NK8 337 aa17.88■□□□□ 0.45
SMC1A-204ENST00000463684 P2RX7Q99572 595 aaKnown RBP17.88■□□□□ 0.45
SMC1A-204ENST00000463684 NOL10Q9BSC4 688 aaKnown RBP17.88■□□□□ 0.45
SMC1A-204ENST00000463684 WDR18Q9BV38 432 aa17.88■□□□□ 0.45
SMC1A-204ENST00000463684 RAI14Q9P0K7 980 aa17.88■□□□□ 0.45
SMC1A-204ENST00000463684 PI4KBQ9UBF8 816 aa17.88■□□□□ 0.45
SMC1A-204ENST00000463684 PHIPQ8WWQ0 1821 aa17.88■□□□□ 0.45
SMC1A-204ENST00000463684 ZKSCAN1P17029 563 aaPredicted RBP17.87■□□□□ 0.45
SMC1A-204ENST00000463684 MAPK4P31152 587 aa17.87■□□□□ 0.45
SMC1A-204ENST00000463684 HOXA7P31268 230 aaPredicted RBP17.87■□□□□ 0.45
SMC1A-204ENST00000463684 BACE1P56817 501 aa17.87■□□□□ 0.45
SMC1A-204ENST00000463684 TFCP2Q12800 502 aa17.87■□□□□ 0.45
SMC1A-204ENST00000463684 MTMR2Q13614 643 aa17.87■□□□□ 0.45
SMC1A-204ENST00000463684 RRP1BQ14684 758 aaKnown RBP17.87■□□□□ 0.45
SMC1A-204ENST00000463684 TEX11Q8IYF3 940 aa17.87■□□□□ 0.45
SMC1A-204ENST00000463684 ZNF384Q8TF68 577 aa17.87■□□□□ 0.45
SMC1A-204ENST00000463684 NSUN4Q96CB9 384 aaKnown RBP17.87■□□□□ 0.45
SMC1A-204ENST00000463684 PTPRFP10586 1907 aa17.87■□□□□ 0.45
SMC1A-204ENST00000463684 PFASO15067 1338 aa17.87■□□□□ 0.45
SMC1A-204ENST00000463684 C19orf81C9J6K1 198 aa17.86■□□□□ 0.45
SMC1A-204ENST00000463684 ASNSP08243 561 aa17.86■□□□□ 0.45
SMC1A-204ENST00000463684 HERVK_113P62684 666 aa17.86■□□□□ 0.45
SMC1A-204ENST00000463684 CACNB2Q08289 660 aaPredicted RBP17.86■□□□□ 0.45
SMC1A-204ENST00000463684 TBC1D9Q6ZT07 1266 aa17.86■□□□□ 0.45
SMC1A-204ENST00000463684 SPATA5Q8NB90 893 aa17.86■□□□□ 0.45
SMC1A-204ENST00000463684 DHX36Q9H2U1 1008 aaKnown RBP17.86■□□□□ 0.45
SMC1A-204ENST00000463684 HMG20BQ9P0W2 317 aa17.86■□□□□ 0.45
SMC1A-204ENST00000463684 COL2A1P02458 1487 aaPredicted RBP17.86■□□□□ 0.45
SMC1A-204ENST00000463684 ALPK3Q96L96 1907 aa17.86■□□□□ 0.45
SMC1A-204ENST00000463684 COL6A1P12109 1028 aa17.85■□□□□ 0.45
SMC1A-204ENST00000463684 MDM2Q00987 491 aaPredicted RBP17.85■□□□□ 0.45
SMC1A-204ENST00000463684 TRIM34Q9BYJ4 488 aa17.85■□□□□ 0.45
SMC1A-204ENST00000463684 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
SMC1A-204ENST00000463684 LRP2BPQ9P2M1 347 aa17.85■□□□□ 0.45
SMC1A-204ENST00000463684 USP17L10C9JJH3 530 aa17.84■□□□□ 0.45
SMC1A-204ENST00000463684 RGS2P41220 211 aa17.84■□□□□ 0.45
SMC1A-204ENST00000463684 LRRC26Q2I0M4 334 aa17.84■□□□□ 0.45
SMC1A-204ENST00000463684 GTF3C2Q8WUA4 911 aaPredicted RBP17.84■□□□□ 0.45
SMC1A-204ENST00000463684 API5Q9BZZ5 524 aaKnown RBP17.84■□□□□ 0.45
SMC1A-204ENST00000463684 TXNRD2Q9NNW7 524 aa17.84■□□□□ 0.45
SMC1A-204ENST00000463684 RBPJLQ9UBG7 517 aa17.84■□□□□ 0.45
SMC1A-204ENST00000463684 NOB1Q9ULX3 412 aaKnown RBP17.84■□□□□ 0.45
SMC1A-204ENST00000463684 DOCK3Q8IZD9 2030 aa17.84■□□□□ 0.45
SMC1A-204ENST00000463684 SRGAP3O43295 1099 aa17.83■□□□□ 0.44
SMC1A-204ENST00000463684 PEX10O60683 326 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms