RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 MYO5AQ9Y4I1 1855 aaKnown RBP25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 HMMRO75330 724 aa25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 BCRP11274 1271 aa25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 CAP2P40123 477 aa25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 AACSQ86V21 672 aa25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 SIRT2Q8IXJ6 389 aa25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 ARHGAP39Q9C0H5 1083 aa25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 CPA4Q9UI42 421 aa25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 COG6Q9Y2V7 657 aa25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 PTCH2Q9Y6C5 1203 aa25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 FOCADQ5VW36 1801 aa25.09■■□□□ 1.61
PDLIM4-205ENST00000463615 KIF1BPQ96EK5 621 aa25.08■■□□□ 1.61
PDLIM4-205ENST00000463615 ZNF333Q96JL9 665 aa25.08■■□□□ 1.61
PDLIM4-205ENST00000463615 FLT1P17948 1338 aa25.08■■□□□ 1.6
PDLIM4-205ENST00000463615 SIPA1L1O43166 1804 aa25.07■■□□□ 1.6
PDLIM4-205ENST00000463615 CDK5RAP2Q96SN8 1893 aa25.07■■□□□ 1.6
PDLIM4-205ENST00000463615 PDE3AQ14432 1141 aa25.07■■□□□ 1.6
PDLIM4-205ENST00000463615 FOXP4Q8IVH2 680 aaPredicted RBP25.07■■□□□ 1.6
PDLIM4-205ENST00000463615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.07■■□□□ 1.6
PDLIM4-205ENST00000463615 TGFBRAP1Q8WUH2 860 aa25.07■■□□□ 1.6
PDLIM4-205ENST00000463615 KIAA0100Q14667 2235 aaKnown RBP25.06■■□□□ 1.6
PDLIM4-205ENST00000463615 FAM196BA6NMK8 535 aa25.06■■□□□ 1.6
PDLIM4-205ENST00000463615 CYP7A1P22680 504 aa25.06■■□□□ 1.6
PDLIM4-205ENST00000463615 CTGFP29279 349 aa25.06■■□□□ 1.6
PDLIM4-205ENST00000463615 RRP1BQ14684 758 aaKnown RBP25.06■■□□□ 1.6
PDLIM4-205ENST00000463615 NBPF11Q86T75 865 aa25.06■■□□□ 1.6
PDLIM4-205ENST00000463615 RAB11FIP3O75154 756 aa25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 IDH1O75874 414 aaKnown RBP25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 CYP2C8P10632 490 aa25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 SLC9C1Q4G0N8 1177 aa25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 CLASRPQ8N2M8 674 aaKnown RBP25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 PROCA1Q8NCQ7 364 aaPredicted RBP25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 TRIM47Q96LD4 638 aa25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 IL1RAPL2Q9NP60 686 aa25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 GINM1Q9NU53 330 aa25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 AGTPBP1Q9UPW5 1226 aa25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 ZSWIM8A7E2V4 1837 aa25.05■■□□□ 1.6
PDLIM4-205ENST00000463615 POTEFA5A3E0 1075 aa25.04■■□□□ 1.6
PDLIM4-205ENST00000463615 TRIM75PA6NK02 468 aa25.04■■□□□ 1.6
PDLIM4-205ENST00000463615 PSMC4P43686 418 aa25.04■■□□□ 1.6
PDLIM4-205ENST00000463615 MAP3K12Q12852 859 aa25.04■■□□□ 1.6
PDLIM4-205ENST00000463615 MAPKAPK5Q8IW41 473 aa25.04■■□□□ 1.6
PDLIM4-205ENST00000463615 ZNF280CQ8ND82 737 aa25.04■■□□□ 1.6
PDLIM4-205ENST00000463615 ANTXR1Q9H6X2 564 aa25.04■■□□□ 1.6
PDLIM4-205ENST00000463615 DNAJC18Q9H819 358 aa25.04■■□□□ 1.6
PDLIM4-205ENST00000463615 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.04■■□□□ 1.6
PDLIM4-205ENST00000463615 SRRDQ9UH36 339 aa25.04■■□□□ 1.6
PDLIM4-205ENST00000463615 HOXD10P28358 340 aa25.03■■□□□ 1.6
PDLIM4-205ENST00000463615 SH3D19Q5HYK7 790 aa25.03■■□□□ 1.6
PDLIM4-205ENST00000463615 GADL1Q6ZQY3 521 aa25.03■■□□□ 1.6
PDLIM4-205ENST00000463615 CCDC84Q86UT8 332 aaPredicted RBP25.03■■□□□ 1.6
PDLIM4-205ENST00000463615 USP17L5A8MUK1 530 aa25.02■■□□□ 1.6
PDLIM4-205ENST00000463615 DYNLL1P63167 89 aaKnown RBP25.02■■□□□ 1.6
PDLIM4-205ENST00000463615 SPP2Q13103 211 aa25.02■■□□□ 1.6
PDLIM4-205ENST00000463615 TTF1Q15361 905 aaPredicted RBP25.02■■□□□ 1.6
PDLIM4-205ENST00000463615 MAGEB6Q8N7X4 407 aa25.02■■□□□ 1.6
PDLIM4-205ENST00000463615 WDR18Q9BV38 432 aa25.02■■□□□ 1.6
PDLIM4-205ENST00000463615 NDUFB9Q9Y6M9 179 aa25.02■■□□□ 1.6
PDLIM4-205ENST00000463615 LOC285556D6RIA3 1793 aa25.02■■□□□ 1.6
PDLIM4-205ENST00000463615 ATAD5Q96QE3 1844 aa25.02■■□□□ 1.6
PDLIM4-205ENST00000463615 ASNSP08243 561 aa25.01■■□□□ 1.59
PDLIM4-205ENST00000463615 OSBPP22059 807 aa25.01■■□□□ 1.59
PDLIM4-205ENST00000463615 AS3MTQ9HBK9 375 aa25.01■■□□□ 1.59
PDLIM4-205ENST00000463615 PALD1Q9ULE6 856 aa25.01■■□□□ 1.59
PDLIM4-205ENST00000463615 CENPFP49454 3210 aa25■■□□□ 1.59
PDLIM4-205ENST00000463615 TMEM106CQ9BVX2 250 aa25■■□□□ 1.59
PDLIM4-205ENST00000463615 PNMA3Q9UL41 463 aa25■■□□□ 1.59
PDLIM4-205ENST00000463615 HLA-DOAP06340 250 aa24.99■■□□□ 1.59
PDLIM4-205ENST00000463615 FCGRTP55899 365 aa24.99■■□□□ 1.59
PDLIM4-205ENST00000463615 TREML2Q5T2D2 321 aa24.99■■□□□ 1.59
PDLIM4-205ENST00000463615 MIGA1Q8NAN2 632 aa24.99■■□□□ 1.59
PDLIM4-205ENST00000463615 RIOK1Q9BRS2 568 aaKnown RBP24.99■■□□□ 1.59
PDLIM4-205ENST00000463615 EHD4Q9H223 541 aa24.99■■□□□ 1.59
PDLIM4-205ENST00000463615 FMNL1O95466 1100 aaPredicted RBP24.98■■□□□ 1.59
PDLIM4-205ENST00000463615 IFIT2P09913 472 aaKnown RBP24.98■■□□□ 1.59
PDLIM4-205ENST00000463615 PRPF38BQ5VTL8 546 aaKnown RBP24.98■■□□□ 1.59
PDLIM4-205ENST00000463615 MYPNQ86TC9 1320 aa24.97■■□□□ 1.59
PDLIM4-205ENST00000463615 JAG1P78504 1218 aa24.97■■□□□ 1.59
PDLIM4-205ENST00000463615 PABPC4Q13310 644 aaKnown RBP eCLIP24.97■■□□□ 1.59
PDLIM4-205ENST00000463615 C20orf194Q5TEA3 1177 aa24.97■■□□□ 1.59
PDLIM4-205ENST00000463615 CRACR2BQ8N4Y2 399 aaPredicted RBP24.97■■□□□ 1.59
PDLIM4-205ENST00000463615 SMCR8Q8TEV9 937 aaPredicted RBP24.97■■□□□ 1.59
PDLIM4-205ENST00000463615 HMGCS2P54868 508 aa24.96■■□□□ 1.59
PDLIM4-205ENST00000463615 BACE1P56817 501 aa24.96■■□□□ 1.59
PDLIM4-205ENST00000463615 FAM110CQ1W6H9 321 aa24.96■■□□□ 1.59
PDLIM4-205ENST00000463615 TATDN1Q6P1N9 297 aa24.96■■□□□ 1.59
PDLIM4-205ENST00000463615 SH3TC2Q8TF17 1288 aa24.96■■□□□ 1.59
PDLIM4-205ENST00000463615 TRIM34Q9BYJ4 488 aa24.96■■□□□ 1.59
PDLIM4-205ENST00000463615 MGAMO43451 1857 aa24.96■■□□□ 1.59
PDLIM4-205ENST00000463615 C19orf81C9J6K1 198 aa24.95■■□□□ 1.58
PDLIM4-205ENST00000463615 PDE6AP16499 860 aa24.95■■□□□ 1.58
PDLIM4-205ENST00000463615 EN2P19622 333 aaPredicted RBP24.95■■□□□ 1.58
PDLIM4-205ENST00000463615 USP5P45974 858 aa24.95■■□□□ 1.58
PDLIM4-205ENST00000463615 GCLCP48506 637 aaPredicted RBP24.95■■□□□ 1.58
PDLIM4-205ENST00000463615 SAP30BPQ9UHR5 308 aaKnown RBP24.95■■□□□ 1.58
PDLIM4-205ENST00000463615 ZBTB21Q9ULJ3 1066 aa24.95■■□□□ 1.58
PDLIM4-205ENST00000463615 MYH1P12882 1939 aa24.94■■□□□ 1.58
PDLIM4-205ENST00000463615 APBB1O00213 710 aa24.94■■□□□ 1.58
PDLIM4-205ENST00000463615 ATP5JP18859 108 aa24.94■■□□□ 1.58
PDLIM4-205ENST00000463615 HOXA7P31268 230 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms