RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RBM27Q9P2N5 1060 aaKnown RBP11.66□□□□□ -0.54
PTPRD-207ENST00000463477 ZNF70Q9UC06 446 aaPredicted RBP11.66□□□□□ -0.54
PTPRD-207ENST00000463477 MKRN1Q9UHC7 482 aaKnown RBP11.66□□□□□ -0.54
PTPRD-207ENST00000463477 SCAF8Q9UPN6 1271 aaKnown RBP11.66□□□□□ -0.54
PTPRD-207ENST00000463477 PPP2R3BQ9Y5P8 575 aa11.66□□□□□ -0.54
PTPRD-207ENST00000463477 CNTNAP1P78357 1384 aa11.66□□□□□ -0.54
PTPRD-207ENST00000463477 CLRN2A0PK11 232 aa11.65□□□□□ -0.54
PTPRD-207ENST00000463477 ESPNB1AK53 854 aa11.65□□□□□ -0.54
PTPRD-207ENST00000463477 IGSF3O75054 1194 aa11.65□□□□□ -0.54
PTPRD-207ENST00000463477 FKBP1BP68106 108 aa11.65□□□□□ -0.54
PTPRD-207ENST00000463477 TOB2Q14106 344 aaPredicted RBP11.65□□□□□ -0.54
PTPRD-207ENST00000463477 LRRFIP1Q32MZ4 808 aaKnown RBP11.65□□□□□ -0.54
PTPRD-207ENST00000463477 TTC39AQ5SRH9 613 aa11.65□□□□□ -0.54
PTPRD-207ENST00000463477 ZMYM1Q5SVZ6 1142 aa11.65□□□□□ -0.54
PTPRD-207ENST00000463477 CHAMP1Q96JM3 812 aa11.65□□□□□ -0.54
PTPRD-207ENST00000463477 ABCF2Q9UG63 623 aa11.65□□□□□ -0.54
PTPRD-207ENST00000463477 TRPM7Q96QT4 1865 aa11.65□□□□□ -0.54
PTPRD-207ENST00000463477 SYCE3A1L190 88 aa11.65□□□□□ -0.55
PTPRD-207ENST00000463477 ELP1O95163 1332 aa11.65□□□□□ -0.55
PTPRD-207ENST00000463477 TNFAIP1Q13829 316 aa11.65□□□□□ -0.55
PTPRD-207ENST00000463477 CCDC183Q5T5S1 534 aa11.65□□□□□ -0.55
PTPRD-207ENST00000463477 FKBP1CQ5VVH2 108 aa11.65□□□□□ -0.55
PTPRD-207ENST00000463477 PRAMEF18Q5VWM3 479 aa11.65□□□□□ -0.55
PTPRD-207ENST00000463477 PI16Q6UXB8 463 aa11.65□□□□□ -0.55
PTPRD-207ENST00000463477 SLF2Q8IX21 1173 aa11.65□□□□□ -0.55
PTPRD-207ENST00000463477 FAM184AQ8NB25 1140 aa11.65□□□□□ -0.55
PTPRD-207ENST00000463477 EDC3Q96F86 508 aaKnown RBP11.65□□□□□ -0.55
PTPRD-207ENST00000463477 NEK1Q96PY6 1258 aa11.65□□□□□ -0.55
PTPRD-207ENST00000463477 NF2P35240 595 aa11.64□□□□□ -0.55
PTPRD-207ENST00000463477 VEGFBP49765 207 aa11.64□□□□□ -0.55
PTPRD-207ENST00000463477 RASA3Q14644 834 aa11.64□□□□□ -0.55
PTPRD-207ENST00000463477 DNAJC2Q99543 621 aaKnown RBP11.64□□□□□ -0.55
PTPRD-207ENST00000463477 VEZTQ9HBM0 779 aa11.64□□□□□ -0.55
PTPRD-207ENST00000463477 DAGLAQ9Y4D2 1042 aa11.64□□□□□ -0.55
PTPRD-207ENST00000463477 GADD45BO75293 160 aaPredicted RBP11.63□□□□□ -0.55
PTPRD-207ENST00000463477 ZFYP08048 801 aaPredicted RBP11.63□□□□□ -0.55
PTPRD-207ENST00000463477 CYP21A2P08686 494 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 ECE1P42892 770 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 TNNI2P48788 182 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 HUNKP57058 714 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 DIXDC1Q155Q3 683 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 UVSSAQ2YD98 709 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 SUPT20HL1Q3ZLR7 823 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 GTF3C6Q969F1 213 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 CHMP4CQ96CF2 233 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 LLPHQ9BRT6 129 aaKnown RBP11.63□□□□□ -0.55
PTPRD-207ENST00000463477 AGXT2Q9BYV1 514 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 TSPY26PQ9H489 355 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 CNPY2Q9Y2B0 182 aa11.63□□□□□ -0.55
PTPRD-207ENST00000463477 GAKO14976 1311 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 RNF113AO15541 343 aaKnown RBP11.62□□□□□ -0.55
PTPRD-207ENST00000463477 LDHCP07864 332 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 MECOMQ03112 1051 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 LARP1BQ659C4 914 aaKnown RBP11.62□□□□□ -0.55
PTPRD-207ENST00000463477 FAM83AQ86UY5 434 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 DZIP1Q86YF9 867 aaKnown RBP11.62□□□□□ -0.55
PTPRD-207ENST00000463477 FBXL16Q8N461 479 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 NSUN4Q96CB9 384 aaKnown RBP11.62□□□□□ -0.55
PTPRD-207ENST00000463477 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
PTPRD-207ENST00000463477 LRP2BPQ9P2M1 347 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 MYH13Q9UKX3 1938 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 TCP10L2B9ZVM9 353 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 GOLIM4O00461 696 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 ZAP70P43403 619 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 GSTO1P78417 241 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 CYP4F22Q6NT55 531 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 CDC42EP5Q6NZY7 148 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 ZNF384Q8TF68 577 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 CAPNS2Q96L46 248 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 TMOD2Q9NZR1 351 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 TAF6LQ9Y6J9 622 aa11.62□□□□□ -0.55
PTPRD-207ENST00000463477 DOCK2Q92608 1830 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 GPR75-ASB3A0A0A6YYF3 556 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 UNCXA6NJT0 531 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
PTPRD-207ENST00000463477 MAP2K2P36507 400 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 KRT85P78386 507 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 MAP3K11Q16584 847 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 NBPF12Q5TAG4 269 aaPredicted RBP11.61□□□□□ -0.55
PTPRD-207ENST00000463477 RGMBQ6NW40 437 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 DHX32Q7L7V1 743 aaKnown RBP11.61□□□□□ -0.55
PTPRD-207ENST00000463477 ZSCAN30Q86W11 494 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 NECAB1Q8N987 351 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 CCDC102AQ96A19 550 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 TEPSINQ96N21 525 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 SEC62Q99442 399 aaKnown RBP11.61□□□□□ -0.55
PTPRD-207ENST00000463477 GDPD2Q9HCC8 539 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 USP40Q9NVE5 1235 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 RAI14Q9P0K7 980 aa11.61□□□□□ -0.55
PTPRD-207ENST00000463477 PFKFB2O60825 505 aa11.6□□□□□ -0.55
PTPRD-207ENST00000463477 CACNB3P54284 484 aa11.6□□□□□ -0.55
PTPRD-207ENST00000463477 EXOSC10Q01780 885 aaKnown RBP11.6□□□□□ -0.55
PTPRD-207ENST00000463477 LDLRAD1Q5T700 205 aa11.6□□□□□ -0.55
PTPRD-207ENST00000463477 TMED8Q6PL24 325 aaPredicted RBP11.6□□□□□ -0.55
PTPRD-207ENST00000463477 CCDC129Q6ZRS4 1044 aa11.6□□□□□ -0.55
PTPRD-207ENST00000463477 ARMC9Q7Z3E5 817 aa11.6□□□□□ -0.55
PTPRD-207ENST00000463477 SMARCC2Q8TAQ2 1214 aa11.6□□□□□ -0.55
PTPRD-207ENST00000463477 FAM151AQ8WW52 585 aa11.6□□□□□ -0.55
PTPRD-207ENST00000463477 IDI2Q9BXS1 227 aa11.6□□□□□ -0.55
PTPRD-207ENST00000463477 NDUFB9Q9Y6M9 179 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms