RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 ZNF280CQ8ND82 737 aa19.09■□□□□ 0.65
APP-211ENST00000462267 KLHDC4Q8TBB5 520 aa19.09■□□□□ 0.65
APP-211ENST00000462267 SOCS4Q8WXH5 440 aa19.09■□□□□ 0.65
APP-211ENST00000462267 NUDT12Q9BQG2 462 aa19.09■□□□□ 0.65
APP-211ENST00000462267 GNL3LQ9NVN8 582 aaKnown RBP19.09■□□□□ 0.65
APP-211ENST00000462267 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.09■□□□□ 0.65
APP-211ENST00000462267 GAKO14976 1311 aa19.08■□□□□ 0.65
APP-211ENST00000462267 SLURP2P0DP57 97 aa19.08■□□□□ 0.64
APP-211ENST00000462267 LHX8Q68G74 356 aa19.08■□□□□ 0.64
APP-211ENST00000462267 EYSQ5T1H1 3165 aa19.07■□□□□ 0.64
APP-211ENST00000462267 ZKSCAN1P17029 563 aaPredicted RBP19.07■□□□□ 0.64
APP-211ENST00000462267 HMGCS2P54868 508 aa19.07■□□□□ 0.64
APP-211ENST00000462267 CACNB2Q08289 660 aaPredicted RBP19.07■□□□□ 0.64
APP-211ENST00000462267 OSBPL5Q9H0X9 879 aaPredicted RBP19.07■□□□□ 0.64
APP-211ENST00000462267 SEMA6BQ9H3T3 888 aa19.07■□□□□ 0.64
APP-211ENST00000462267 MYH13Q9UKX3 1938 aa19.07■□□□□ 0.64
APP-211ENST00000462267 PRUNE2Q8WUY3 3088 aa19.06■□□□□ 0.64
APP-211ENST00000462267 EYA2O00167 538 aa19.06■□□□□ 0.64
APP-211ENST00000462267 SEMA3EO15041 775 aa19.06■□□□□ 0.64
APP-211ENST00000462267 WDR63Q8IWG1 891 aa19.06■□□□□ 0.64
APP-211ENST00000462267 SLF2Q8IX21 1173 aa19.06■□□□□ 0.64
APP-211ENST00000462267 ZGPATQ8N5A5 531 aaKnown RBP19.06■□□□□ 0.64
APP-211ENST00000462267 DDX4Q9NQI0 724 aaKnown RBP19.06■□□□□ 0.64
APP-211ENST00000462267 DENND2AQ9ULE3 1009 aa19.06■□□□□ 0.64
APP-211ENST00000462267 PLXNB2O15031 1838 aa19.05■□□□□ 0.64
APP-211ENST00000462267 PDE3AQ14432 1141 aa19.05■□□□□ 0.64
APP-211ENST00000462267 SH3D19Q5HYK7 790 aa19.05■□□□□ 0.64
APP-211ENST00000462267 FAM163AQ96GL9 167 aaPredicted RBP19.05■□□□□ 0.64
APP-211ENST00000462267 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.05■□□□□ 0.64
APP-211ENST00000462267 PRKAG2Q9UGJ0 569 aa19.05■□□□□ 0.64
APP-211ENST00000462267 LOC285556D6RIA3 1793 aa19.04■□□□□ 0.64
APP-211ENST00000462267 ZBTB22O15209 634 aa19.04■□□□□ 0.64
APP-211ENST00000462267 COL9A1P20849 921 aa19.04■□□□□ 0.64
APP-211ENST00000462267 CCND3P30281 292 aaPredicted RBP19.04■□□□□ 0.64
APP-211ENST00000462267 MAPK4P31152 587 aa19.04■□□□□ 0.64
APP-211ENST00000462267 IRX3P78415 501 aaPredicted RBP19.04■□□□□ 0.64
APP-211ENST00000462267 PICALMQ13492 652 aa19.04■□□□□ 0.64
APP-211ENST00000462267 GPRC5AQ8NFJ5 357 aa19.04■□□□□ 0.64
APP-211ENST00000462267 NPM3O75607 178 aaKnown RBP19.03■□□□□ 0.64
APP-211ENST00000462267 DZIP1Q86YF9 867 aaKnown RBP19.03■□□□□ 0.64
APP-211ENST00000462267 USP6NLQ92738 828 aa19.03■□□□□ 0.64
APP-211ENST00000462267 SENP6Q9GZR1 1112 aaPredicted RBP19.03■□□□□ 0.64
APP-211ENST00000462267 USP17L5A8MUK1 530 aa19.02■□□□□ 0.64
APP-211ENST00000462267 HOXA7P31268 230 aaPredicted RBP19.02■□□□□ 0.64
APP-211ENST00000462267 CAP2P40123 477 aa19.02■□□□□ 0.64
APP-211ENST00000462267 RGS2P41220 211 aa19.02■□□□□ 0.64
APP-211ENST00000462267 MYLIPQ8WY64 445 aa19.02■□□□□ 0.64
APP-211ENST00000462267 AS3MTQ9HBK9 375 aa19.02■□□□□ 0.64
APP-211ENST00000462267 BTDP43251 543 aa19.01■□□□□ 0.63
APP-211ENST00000462267 RFX5P48382 616 aaPredicted RBP19.01■□□□□ 0.63
APP-211ENST00000462267 ATP2B3Q16720 1220 aa19.01■□□□□ 0.63
APP-211ENST00000462267 ATG9AQ7Z3C6 839 aa19.01■□□□□ 0.63
APP-211ENST00000462267 P2RX7Q99572 595 aaKnown RBP19.01■□□□□ 0.63
APP-211ENST00000462267 MYH2Q9UKX2 1941 aa19.01■□□□□ 0.63
APP-211ENST00000462267 DNAH12Q6ZR08 3092 aa19.01■□□□□ 0.63
APP-211ENST00000462267 FAM196BA6NMK8 535 aa19■□□□□ 0.63
APP-211ENST00000462267 PHKA1P46020 1223 aa19■□□□□ 0.63
APP-211ENST00000462267 SMAD3P84022 425 aaKnown RBP19■□□□□ 0.63
APP-211ENST00000462267 SHHQ15465 462 aa19■□□□□ 0.63
APP-211ENST00000462267 CCL14Q16627 93 aa19■□□□□ 0.63
APP-211ENST00000462267 MORN1Q5T089 497 aa19■□□□□ 0.63
APP-211ENST00000462267 CCAR1Q8IX12 1150 aaKnown RBP19■□□□□ 0.63
APP-211ENST00000462267 APBA2Q99767 749 aa19■□□□□ 0.63
APP-211ENST00000462267 TXNRD2Q9NNW7 524 aa19■□□□□ 0.63
APP-211ENST00000462267 FBXO3Q9UK99 471 aa19■□□□□ 0.63
APP-211ENST00000462267 FOSL2P15408 326 aa18.99■□□□□ 0.63
APP-211ENST00000462267 HERVK_113P62684 666 aa18.99■□□□□ 0.63
APP-211ENST00000462267 SPTY2D1Q68D10 685 aaPredicted RBP18.99■□□□□ 0.63
APP-211ENST00000462267 WDR18Q9BV38 432 aa18.99■□□□□ 0.63
APP-211ENST00000462267 TTYH1Q9H313 450 aaPredicted RBP18.99■□□□□ 0.63
APP-211ENST00000462267 TMOD4Q9NZQ9 345 aa18.99■□□□□ 0.63
APP-211ENST00000462267 CEP126Q9P2H0 1117 aa18.99■□□□□ 0.63
APP-211ENST00000462267 MROH7-TTC4A0A0A0MT08 1334 aa18.99■□□□□ 0.63
APP-211ENST00000462267 GPR75-ASB3A0A0A6YYF3 556 aa18.98■□□□□ 0.63
APP-211ENST00000462267 TNFRSF10AO00220 468 aa18.98■□□□□ 0.63
APP-211ENST00000462267 MSCO60682 206 aa18.98■□□□□ 0.63
APP-211ENST00000462267 MAP4K4O95819 1239 aaPredicted RBP18.98■□□□□ 0.63
APP-211ENST00000462267 ATN1P54259 1190 aaPredicted RBP18.98■□□□□ 0.63
APP-211ENST00000462267 BACE1P56817 501 aa18.98■□□□□ 0.63
APP-211ENST00000462267 RHBDL3P58872 404 aa18.98■□□□□ 0.63
APP-211ENST00000462267 TJAP1Q5JTD0 557 aa18.98■□□□□ 0.63
APP-211ENST00000462267 GPR142Q7Z601 462 aa18.98■□□□□ 0.63
APP-211ENST00000462267 PLEKHH3Q7Z736 793 aa18.98■□□□□ 0.63
APP-211ENST00000462267 GTF3C2Q8WUA4 911 aaPredicted RBP18.98■□□□□ 0.63
APP-211ENST00000462267 RBPJLQ9UBG7 517 aa18.98■□□□□ 0.63
APP-211ENST00000462267 ABCF2Q9UG63 623 aa18.98■□□□□ 0.63
APP-211ENST00000462267 MAST2Q6P0Q8 1798 aa18.98■□□□□ 0.63
APP-211ENST00000462267 DNM1LO00429 736 aa18.97■□□□□ 0.63
APP-211ENST00000462267 PEX10O60683 326 aa18.97■□□□□ 0.63
APP-211ENST00000462267 RTP1P59025 263 aa18.97■□□□□ 0.63
APP-211ENST00000462267 ERVK-9P63128 1117 aa18.97■□□□□ 0.63
APP-211ENST00000462267 ERVK-24P63145 666 aa18.97■□□□□ 0.63
APP-211ENST00000462267 MTMR2Q13614 643 aa18.97■□□□□ 0.63
APP-211ENST00000462267 C9orf50Q5SZB4 431 aa18.97■□□□□ 0.63
APP-211ENST00000462267 MFSD14CQ5VZR4 134 aa18.97■□□□□ 0.63
APP-211ENST00000462267 LPAR1Q92633 364 aa18.97■□□□□ 0.63
APP-211ENST00000462267 USP44Q9H0E7 712 aa18.97■□□□□ 0.63
APP-211ENST00000462267 PORCNQ9H237 461 aa18.97■□□□□ 0.63
APP-211ENST00000462267 PDS5AQ29RF7 1337 aaKnown RBP18.97■□□□□ 0.63
APP-211ENST00000462267 TMEM265A0A087WTH1 108 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms