RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SOX10P56693 466 aa11.23□□□□□ -0.61
BRCA1-207ENST00000461798 C17orf99Q6UX52 265 aa11.23□□□□□ -0.61
BRCA1-207ENST00000461798 ZSCAN29Q8IWY8 852 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-207ENST00000461798 RPAP2Q8IXW5 612 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-207ENST00000461798 ARMC5Q96C12 935 aa11.23□□□□□ -0.61
BRCA1-207ENST00000461798 SNRKQ9NRH2 765 aa11.23□□□□□ -0.61
BRCA1-207ENST00000461798 COL2A1P02458 1487 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-207ENST00000461798 BAG3O95817 575 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 GNRH1P01148 92 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 PTPRAP18433 802 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 PICALMQ13492 652 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 HSP90AB4PQ58FF6 505 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 GPAT2Q6NUI2 795 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 TMED8Q6PL24 325 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-207ENST00000461798 ERC1Q8IUD2 1116 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 OSBPL5Q9H0X9 879 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-207ENST00000461798 PICK1Q9NRD5 415 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 ZBTB40Q9NUA8 1239 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 AFG3L2Q9Y4W6 797 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 ZHX2Q9Y6X8 837 aa11.22□□□□□ -0.61
BRCA1-207ENST00000461798 MYH2Q9UKX2 1941 aa11.21□□□□□ -0.61
BRCA1-207ENST00000461798 ADGRA2Q96PE1 1338 aa11.21□□□□□ -0.61
BRCA1-207ENST00000461798 A0A0G2JLL6 359 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-207ENST00000461798 PDHXO00330 501 aa11.21□□□□□ -0.61
BRCA1-207ENST00000461798 PLCG2P16885 1265 aa11.21□□□□□ -0.61
BRCA1-207ENST00000461798 TIE1P35590 1138 aa11.21□□□□□ -0.61
BRCA1-207ENST00000461798 ZAP70P43403 619 aa11.21□□□□□ -0.61
BRCA1-207ENST00000461798 LACTBP83111 547 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-207ENST00000461798 NAA16Q6N069 864 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-207ENST00000461798 FASTKD5Q7L8L6 764 aaKnown RBP11.21□□□□□ -0.61
BRCA1-207ENST00000461798 PRRT2Q7Z6L0 340 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-207ENST00000461798 TEX11Q8IYF3 940 aa11.21□□□□□ -0.61
BRCA1-207ENST00000461798 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-207ENST00000461798 DHX36Q9H2U1 1008 aaKnown RBP11.21□□□□□ -0.61
BRCA1-207ENST00000461798 DDX19BQ9UMR2 479 aa11.21□□□□□ -0.61
BRCA1-207ENST00000461798 SLC45A1Q9Y2W3 748 aa11.21□□□□□ -0.61
BRCA1-207ENST00000461798 SLURP2P0DP57 97 aa11.2□□□□□ -0.62
BRCA1-207ENST00000461798 PRMT2P55345 433 aa11.2□□□□□ -0.62
BRCA1-207ENST00000461798 METTL16Q86W50 562 aaKnown RBP11.2□□□□□ -0.62
BRCA1-207ENST00000461798 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-207ENST00000461798 NOL10Q9BSC4 688 aaKnown RBP11.2□□□□□ -0.62
BRCA1-207ENST00000461798 CHMP4BQ9H444 224 aaKnown RBP11.2□□□□□ -0.62
BRCA1-207ENST00000461798 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.2□□□□□ -0.62
BRCA1-207ENST00000461798 PIH1D3Q9NQM4 214 aaKnown RBP11.2□□□□□ -0.62
BRCA1-207ENST00000461798 TLR7Q9NYK1 1049 aaKnown RBP11.2□□□□□ -0.62
BRCA1-207ENST00000461798 PI4KBQ9UBF8 816 aa11.2□□□□□ -0.62
BRCA1-207ENST00000461798 HERC5Q9UII4 1024 aaKnown RBP11.2□□□□□ -0.62
BRCA1-207ENST00000461798 RCAN3Q9UKA8 241 aa11.2□□□□□ -0.62
BRCA1-207ENST00000461798 EXOC6BQ9Y2D4 811 aa11.2□□□□□ -0.62
BRCA1-207ENST00000461798 KIF22Q14807 665 aa11.19□□□□□ -0.62
BRCA1-207ENST00000461798 ADGRA1Q86SQ6 560 aa11.19□□□□□ -0.62
BRCA1-207ENST00000461798 CERS3Q8IU89 383 aa11.19□□□□□ -0.62
BRCA1-207ENST00000461798 FOXP4Q8IVH2 680 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-207ENST00000461798 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
BRCA1-207ENST00000461798 SIRT2Q8IXJ6 389 aa11.19□□□□□ -0.62
BRCA1-207ENST00000461798 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
BRCA1-207ENST00000461798 TBC1D2Q9BYX2 928 aa11.19□□□□□ -0.62
BRCA1-207ENST00000461798 AATFQ9NY61 560 aaKnown RBP eCLIP11.19□□□□□ -0.62
BRCA1-207ENST00000461798 COG6Q9Y2V7 657 aa11.19□□□□□ -0.62
BRCA1-207ENST00000461798 RAB11FIP3O75154 756 aa11.18□□□□□ -0.62
BRCA1-207ENST00000461798 HMMRO75330 724 aa11.18□□□□□ -0.62
BRCA1-207ENST00000461798 BCRP11274 1271 aa11.18□□□□□ -0.62
BRCA1-207ENST00000461798 CAP2P40123 477 aa11.18□□□□□ -0.62
BRCA1-207ENST00000461798 PDE3AQ14432 1141 aa11.18□□□□□ -0.62
BRCA1-207ENST00000461798 AACSQ86V21 672 aa11.18□□□□□ -0.62
BRCA1-207ENST00000461798 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.18□□□□□ -0.62
BRCA1-207ENST00000461798 KIF1BPQ96EK5 621 aa11.18□□□□□ -0.62
BRCA1-207ENST00000461798 PARK7Q99497 189 aaKnown RBP11.18□□□□□ -0.62
BRCA1-207ENST00000461798 GINM1Q9NU53 330 aa11.18□□□□□ -0.62
BRCA1-207ENST00000461798 CPA4Q9UI42 421 aa11.18□□□□□ -0.62
BRCA1-207ENST00000461798 FAM196BA6NMK8 535 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 SEC24BO95487 1268 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 CYP7A1P22680 504 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 CTGFP29279 349 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 RRP1BQ14684 758 aaKnown RBP11.17□□□□□ -0.62
BRCA1-207ENST00000461798 NBPF11Q86T75 865 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 CLASRPQ8N2M8 674 aaKnown RBP11.17□□□□□ -0.62
BRCA1-207ENST00000461798 ZNF280CQ8ND82 737 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 TGFBRAP1Q8WUH2 860 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 ZNF333Q96JL9 665 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 TRIM47Q96LD4 638 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 ARHGAP39Q9C0H5 1083 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 PTCH2Q9Y6C5 1203 aa11.17□□□□□ -0.62
BRCA1-207ENST00000461798 FLT1P17948 1338 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 AK9Q5TCS8 1911 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 USP17L5A8MUK1 530 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 IDH1O75874 414 aaKnown RBP11.16□□□□□ -0.62
BRCA1-207ENST00000461798 CYP2C8P10632 490 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 HOXD10P28358 340 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 PSMC4P43686 418 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 DYNLL1P63167 89 aaKnown RBP11.16□□□□□ -0.62
BRCA1-207ENST00000461798 MAP3K12Q12852 859 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 SPP2Q13103 211 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 SH3D19Q5HYK7 790 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 MAPKAPK5Q8IW41 473 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-207ENST00000461798 WDR18Q9BV38 432 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 ANTXR1Q9H6X2 564 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 IL1RAPL2Q9NP60 686 aa11.16□□□□□ -0.62
BRCA1-207ENST00000461798 SRRDQ9UH36 339 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms