RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 VPS72Q15906 364 aa8.52□□□□□ -1.05
NPHP1-209ENST00000461707 CACTINQ8WUQ7 758 aaKnown RBP8.52□□□□□ -1.05
NPHP1-209ENST00000461707 ANGEL1Q9UNK9 670 aaKnown RBP8.52□□□□□ -1.05
NPHP1-209ENST00000461707 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.52□□□□□ -1.05
NPHP1-209ENST00000461707 PRDM1O75626 825 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 NOM1Q5C9Z4 860 aaKnown RBP8.51□□□□□ -1.05
NPHP1-209ENST00000461707 SASS6Q6UVJ0 657 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.51□□□□□ -1.05
NPHP1-209ENST00000461707 APTXQ7Z2E3 356 aaKnown RBP8.51□□□□□ -1.05
NPHP1-209ENST00000461707 TMX1Q9H3N1 280 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 RTEL1Q9NZ71 1219 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 ABCF2Q9UG63 623 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 FAM205CA6NFA0 338 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 USP27XA6NNY8 438 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 WNT7AO00755 349 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 METAP2P50579 478 aaKnown RBP eCLIP8.51□□□□□ -1.05
NPHP1-209ENST00000461707 CRY2Q49AN0 593 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 TBC1D9BQ66K14 1250 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 CLEC4GQ6UXB4 293 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 TXNRD3Q86VQ6 643 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 TDRD7Q8NHU6 1098 aaKnown RBP8.51□□□□□ -1.05
NPHP1-209ENST00000461707 ALG1Q9BT22 464 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 TRIM5Q9C035 493 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.51□□□□□ -1.05
NPHP1-209ENST00000461707 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 SF3A1Q15459 793 aaKnown RBP8.51□□□□□ -1.05
NPHP1-209ENST00000461707 KRT40Q6A162 431 aa8.51□□□□□ -1.05
NPHP1-209ENST00000461707 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.51□□□□□ -1.05
NPHP1-209ENST00000461707 PATL2C9JE40 543 aaKnown RBP8.5□□□□□ -1.05
NPHP1-209ENST00000461707 CPLX1O14810 134 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 VEGFAP15692 232 aaPredicted RBP8.5□□□□□ -1.05
NPHP1-209ENST00000461707 SHC4Q6S5L8 630 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 VPS37DQ86XT2 251 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 FOXP4Q8IVH2 680 aaPredicted RBP8.5□□□□□ -1.05
NPHP1-209ENST00000461707 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 SLC4A4Q9Y6R1 1079 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 MROH5Q6ZUA9 1318 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 NMT2O60551 498 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 SARSP49591 514 aaKnown RBP8.5□□□□□ -1.05
NPHP1-209ENST00000461707 FAM160A1Q05DH4 1040 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 NCAPHQ15003 741 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 TMEM67Q5HYA8 995 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 EARS2Q5JPH6 523 aaKnown RBP8.5□□□□□ -1.05
NPHP1-209ENST00000461707 AOPEPQ8N6M6 819 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 TOMM22Q9NS69 142 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 TFCP2L1Q9NZI6 479 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 BTBD18B2RXH4 712 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 NT5C2P49902 561 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 TOB1P50616 345 aaPredicted RBP8.5□□□□□ -1.05
NPHP1-209ENST00000461707 NR5A1Q13285 461 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 SLC26A6Q9BXS9 759 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 NAPBQ9H115 298 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 DOCK1Q14185 1865 aa8.5□□□□□ -1.05
NPHP1-209ENST00000461707 MINDY4BA8MYZ0 360 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 SPTLC2O15270 562 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 CTIFO43310 598 aaKnown RBP8.49□□□□□ -1.05
NPHP1-209ENST00000461707 EDIL3O43854 480 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 PFKFB1P16118 471 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 KCNJ6P48051 423 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 DNTTIP2Q5QJE6 756 aaKnown RBP8.49□□□□□ -1.05
NPHP1-209ENST00000461707 ZSCAN25Q6NSZ9 544 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 NFXL1Q6ZNB6 911 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 USP49Q70CQ1 688 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 ZNF710Q8N1W2 664 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 TUBE1Q9UJT0 475 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 A0A1W2PQ27 194 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 A0A1W2PQ64 194 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 A0A1W2PQD8 194 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 IFIT3O14879 490 aaKnown RBP8.49□□□□□ -1.05
NPHP1-209ENST00000461707 SLC5A1P13866 664 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 NAA30Q147X3 362 aaPredicted RBP8.49□□□□□ -1.05
NPHP1-209ENST00000461707 STK38Q15208 465 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 ANO1Q5XXA6 986 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 ADALQ6DHV7 355 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 STAG1Q8WVM7 1258 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 GPR101Q96P66 508 aaPredicted RBP8.49□□□□□ -1.05
NPHP1-209ENST00000461707 SBF1O95248 1867 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 ZNF202O95125 648 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 RBM6P78332 1123 aaKnown RBP8.49□□□□□ -1.05
NPHP1-209ENST00000461707 TTF1Q15361 905 aaPredicted RBP8.49□□□□□ -1.05
NPHP1-209ENST00000461707 HSP90AA4PQ58FG1 418 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 DRC7Q8IY82 874 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 MRPS27Q92552 414 aaKnown RBP8.49□□□□□ -1.05
NPHP1-209ENST00000461707 MED15Q96RN5 788 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 POLR3EQ9NVU0 708 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 LRP2BPQ9P2M1 347 aa8.49□□□□□ -1.05
NPHP1-209ENST00000461707 BAZ2BQ9UIF8 2168 aaKnown RBP8.48□□□□□ -1.05
NPHP1-209ENST00000461707 ZBTB43O43298 467 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 CYP7A1P22680 504 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 SH3RF1Q7Z6J0 888 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 CLIP2Q9UDT6 1046 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 MINPP1Q9UNW1 487 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 GOLGA8AA7E2F4 631 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 CYP2D6P10635 497 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 ATP1A3P13637 1013 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 BMP6P22004 513 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 GOLGA8FQ08AF8 430 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 GOLGA8DPQ0D2H9 430 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 TRDNQ13061 729 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 PNOCQ13519 176 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms