RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ECEL1O95672 775 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 SLFN14P0C7P3 912 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 LIG1P18858 919 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 CLCQ05315 142 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 PDE4BQ07343 736 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 RAB33AQ14088 237 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 SHISA2Q6UWI4 295 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 PLPPR2Q96GM1 343 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 PIF1Q9H611 641 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 ACTR10Q9NZ32 417 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 ZNRF3Q9ULT6 936 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 CDK11AQ9UQ88 783 aaPredicted RBP4.68□□□□□ -1.66
VCL-203ENST00000461383 SNCAIPQ9Y6H5 919 aa4.68□□□□□ -1.66
VCL-203ENST00000461383 DCDC2CA8MYV0 355 aa4.67□□□□□ -1.66
VCL-203ENST00000461383 HMGB1P09429 215 aaKnown RBP4.67□□□□□ -1.66
VCL-203ENST00000461383 CD68P34810 354 aaPredicted RBP4.67□□□□□ -1.66
VCL-203ENST00000461383 GIPRP48546 466 aa4.67□□□□□ -1.66
VCL-203ENST00000461383 SETDB1Q15047 1291 aa4.67□□□□□ -1.66
VCL-203ENST00000461383 LRRFIP1Q32MZ4 808 aaKnown RBP4.67□□□□□ -1.66
VCL-203ENST00000461383 LARP1BQ659C4 914 aaKnown RBP4.67□□□□□ -1.66
VCL-203ENST00000461383 LRFN4Q6PJG9 635 aa4.67□□□□□ -1.66
VCL-203ENST00000461383 POLR3KQ9Y2Y1 108 aaPredicted RBP4.67□□□□□ -1.66
VCL-203ENST00000461383 TLDC2A0PJX2 215 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 DDX3YO15523 660 aaKnown RBP4.66□□□□□ -1.66
VCL-203ENST00000461383 CLSTN1O94985 981 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 HTR3BO95264 441 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 PLCG1P19174 1290 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 CDK8P49336 464 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 ETF1P62495 437 aaKnown RBP4.66□□□□□ -1.66
VCL-203ENST00000461383 IFRD2Q12894 506 aaPredicted RBP4.66□□□□□ -1.66
VCL-203ENST00000461383 INPP5AQ14642 412 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 FXNQ16595 210 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 DUOXA2Q1HG44 320 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 IGF2-ASQ6U949 168 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 LSRQ86X29 649 aaPredicted RBP4.66□□□□□ -1.66
VCL-203ENST00000461383 GALNT11Q8NCW6 608 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 MKL1Q969V6 931 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 TP53INP1Q96A56 240 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 EHMT1Q9H9B1 1298 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 ST7Q9NRC1 585 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 KLHL3Q9UH77 587 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 CSADQ9Y600 493 aa4.66□□□□□ -1.66
VCL-203ENST00000461383 LOC100289279A0A1B0GTE1 492 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 DLL1O00548 723 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 KLF4O43474 513 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 ZNF862O60290 1169 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 AOC2O75106 756 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 ATE1O95260 518 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 PGRP06401 933 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 CTSBP07858 339 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 NOS3P29474 1203 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 SERINC3Q13530 473 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 KIF4BQ2VIQ3 1234 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 AKAP4Q5JQC9 854 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 Q6ZS46 218 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 SLC51AQ86UW1 340 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 C12orf40Q86WS4 652 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 FAM169BQ8N8A8 192 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 RBBP8NLQ8NC74 664 aaPredicted RBP4.65□□□□□ -1.67
VCL-203ENST00000461383 WFDC12Q8WWY7 111 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 WDR89Q96FK6 387 aaPredicted RBP4.65□□□□□ -1.67
VCL-203ENST00000461383 DEPDC7Q96QD5 511 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 NRSN2Q9GZP1 204 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 REV1Q9UBZ9 1251 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 USP21Q9UK80 565 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 RNF112Q9ULX5 631 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 CORINQ9Y5Q5 1042 aa4.65□□□□□ -1.67
VCL-203ENST00000461383 GFRA2O00451 464 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 HYAL3O43820 417 aaPredicted RBP4.64□□□□□ -1.67
VCL-203ENST00000461383 DEAF1O75398 565 aaPredicted RBP4.64□□□□□ -1.67
VCL-203ENST00000461383 DDAH1O94760 285 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 NCLP19338 710 aaKnown RBP4.64□□□□□ -1.67
VCL-203ENST00000461383 GRK4P32298 578 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 ID3Q02535 119 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 DDR2Q16832 855 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 EXOSC6Q5RKV6 272 aaKnown RBP4.64□□□□□ -1.67
VCL-203ENST00000461383 NUTM2GQ5VZR2 741 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 SDE2Q6IQ49 451 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 ZNF746Q6NUN9 644 aaPredicted RBP4.64□□□□□ -1.67
VCL-203ENST00000461383 RUFY4Q6ZNE9 571 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 DZIP1LQ8IYY4 767 aaKnown RBP4.64□□□□□ -1.67
VCL-203ENST00000461383 UBASH3BQ8TF42 649 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 TMEM40Q8WWA1 233 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 TM9SF2Q99805 663 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 WDR18Q9BV38 432 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 RUSC1Q9BVN2 902 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 CYP4F12Q9HCS2 524 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 CACNA2D2Q9NY47 1150 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 SNTG2Q9NY99 539 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 GMIPQ9P107 970 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 AP4E1Q9UPM8 1137 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 MAPK8IP1Q9UQF2 711 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 SLC12A7Q9Y666 1083 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 TACC3Q9Y6A5 838 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 CADPSQ9ULU8 1353 aa4.64□□□□□ -1.67
VCL-203ENST00000461383 FAM86C2PA6NEL3 165 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 ADAM11O75078 769 aa4.63□□□□□ -1.67
VCL-203ENST00000461383 HSP90B1P14625 803 aaKnown RBP4.63□□□□□ -1.67
VCL-203ENST00000461383 GUCY2CP25092 1073 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms