RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 PRKAG2Q9UGJ0 569 aa15.92■□□□□ 0.14
C9orf78-202ENST00000461349 UTYO14607 1347 aa15.92■□□□□ 0.14
C9orf78-202ENST00000461349 DDTLA6NHG4 134 aaPredicted RBP15.91■□□□□ 0.14
C9orf78-202ENST00000461349 ZKSCAN1P17029 563 aaPredicted RBP15.91■□□□□ 0.14
C9orf78-202ENST00000461349 SPP2Q13103 211 aa15.91■□□□□ 0.14
C9orf78-202ENST00000461349 PICALMQ13492 652 aa15.91■□□□□ 0.14
C9orf78-202ENST00000461349 PDE3AQ14432 1141 aa15.91■□□□□ 0.14
C9orf78-202ENST00000461349 SH3BP5LQ7L8J4 393 aa15.91■□□□□ 0.14
C9orf78-202ENST00000461349 ZNF280CQ8ND82 737 aa15.91■□□□□ 0.14
C9orf78-202ENST00000461349 KLHDC4Q8TBB5 520 aa15.91■□□□□ 0.14
C9orf78-202ENST00000461349 ASCC2Q9H1I8 757 aaPredicted RBP15.91■□□□□ 0.14
C9orf78-202ENST00000461349 SALL1Q9NSC2 1324 aa15.91■□□□□ 0.14
C9orf78-202ENST00000461349 XRCC5P13010 732 aaKnown RBP15.9■□□□□ 0.14
C9orf78-202ENST00000461349 HMGCS2P54868 508 aa15.9■□□□□ 0.14
C9orf78-202ENST00000461349 SLF2Q8IX21 1173 aa15.9■□□□□ 0.14
C9orf78-202ENST00000461349 ZGPATQ8N5A5 531 aaKnown RBP15.9■□□□□ 0.14
C9orf78-202ENST00000461349 ANKRD44Q8N8A2 993 aa15.9■□□□□ 0.14
C9orf78-202ENST00000461349 MORF4L1Q9UBU8 362 aa15.9■□□□□ 0.14
C9orf78-202ENST00000461349 RFX7Q2KHR2 1363 aa15.89■□□□□ 0.13
C9orf78-202ENST00000461349 IRX3P78415 501 aaPredicted RBP15.89■□□□□ 0.13
C9orf78-202ENST00000461349 CACNB2Q08289 660 aaPredicted RBP15.89■□□□□ 0.13
C9orf78-202ENST00000461349 DZIP1Q86YF9 867 aaKnown RBP15.89■□□□□ 0.13
C9orf78-202ENST00000461349 CCAR1Q8IX12 1150 aaKnown RBP15.89■□□□□ 0.13
C9orf78-202ENST00000461349 OSBPL5Q9H0X9 879 aaPredicted RBP15.89■□□□□ 0.13
C9orf78-202ENST00000461349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.89■□□□□ 0.13
C9orf78-202ENST00000461349 DENND2AQ9ULE3 1009 aa15.89■□□□□ 0.13
C9orf78-202ENST00000461349 DNAH12Q6ZR08 3092 aa15.88■□□□□ 0.13
C9orf78-202ENST00000461349 SEMA3EO15041 775 aa15.88■□□□□ 0.13
C9orf78-202ENST00000461349 TBC1D12O60347 775 aa15.88■□□□□ 0.13
C9orf78-202ENST00000461349 SLURP2P0DP57 97 aa15.88■□□□□ 0.13
C9orf78-202ENST00000461349 COL9A1P20849 921 aa15.88■□□□□ 0.13
C9orf78-202ENST00000461349 AS3MTQ9HBK9 375 aa15.88■□□□□ 0.13
C9orf78-202ENST00000461349 GAKO14976 1311 aa15.88■□□□□ 0.13
C9orf78-202ENST00000461349 PRUNE2Q8WUY3 3088 aa15.88■□□□□ 0.13
C9orf78-202ENST00000461349 EYA2O00167 538 aa15.87■□□□□ 0.13
C9orf78-202ENST00000461349 CCND3P30281 292 aaPredicted RBP15.87■□□□□ 0.13
C9orf78-202ENST00000461349 MAPK4P31152 587 aa15.87■□□□□ 0.13
C9orf78-202ENST00000461349 RGS2P41220 211 aa15.87■□□□□ 0.13
C9orf78-202ENST00000461349 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
C9orf78-202ENST00000461349 LHX8Q68G74 356 aa15.87■□□□□ 0.13
C9orf78-202ENST00000461349 GPRC5AQ8NFJ5 357 aa15.87■□□□□ 0.13
C9orf78-202ENST00000461349 SENP6Q9GZR1 1112 aaPredicted RBP15.87■□□□□ 0.13
C9orf78-202ENST00000461349 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
C9orf78-202ENST00000461349 DDX4Q9NQI0 724 aaKnown RBP15.87■□□□□ 0.13
C9orf78-202ENST00000461349 USP17L5A8MUK1 530 aa15.86■□□□□ 0.13
C9orf78-202ENST00000461349 FOSL2P15408 326 aa15.86■□□□□ 0.13
C9orf78-202ENST00000461349 BTDP43251 543 aa15.86■□□□□ 0.13
C9orf78-202ENST00000461349 ATP2B3Q16720 1220 aa15.86■□□□□ 0.13
C9orf78-202ENST00000461349 WDR63Q8IWG1 891 aa15.86■□□□□ 0.13
C9orf78-202ENST00000461349 MYLIPQ8WY64 445 aa15.86■□□□□ 0.13
C9orf78-202ENST00000461349 CWC22Q9HCG8 908 aaKnown RBP15.86■□□□□ 0.13
C9orf78-202ENST00000461349 RLFQ13129 1914 aa15.86■□□□□ 0.13
C9orf78-202ENST00000461349 FAM196BA6NMK8 535 aa15.85■□□□□ 0.13
C9orf78-202ENST00000461349 SH3D19Q5HYK7 790 aa15.85■□□□□ 0.13
C9orf78-202ENST00000461349 APBA2Q99767 749 aa15.85■□□□□ 0.13
C9orf78-202ENST00000461349 TMOD4Q9NZQ9 345 aa15.85■□□□□ 0.13
C9orf78-202ENST00000461349 ABCF2Q9UG63 623 aa15.85■□□□□ 0.13
C9orf78-202ENST00000461349 CDH23Q9H251 3354 aa15.85■□□□□ 0.13
C9orf78-202ENST00000461349 CAP2P40123 477 aa15.84■□□□□ 0.13
C9orf78-202ENST00000461349 ATN1P54259 1190 aaPredicted RBP15.84■□□□□ 0.13
C9orf78-202ENST00000461349 HERVK_113P62684 666 aa15.84■□□□□ 0.13
C9orf78-202ENST00000461349 SPTY2D1Q68D10 685 aaPredicted RBP15.84■□□□□ 0.13
C9orf78-202ENST00000461349 TNFRSF10AO00220 468 aa15.83■□□□□ 0.12
C9orf78-202ENST00000461349 SMAD3P84022 425 aaKnown RBP15.83■□□□□ 0.12
C9orf78-202ENST00000461349 SHHQ15465 462 aa15.83■□□□□ 0.12
C9orf78-202ENST00000461349 CCL14Q16627 93 aa15.83■□□□□ 0.12
C9orf78-202ENST00000461349 FAM163AQ96GL9 167 aaPredicted RBP15.83■□□□□ 0.12
C9orf78-202ENST00000461349 P2RX7Q99572 595 aaKnown RBP15.83■□□□□ 0.12
C9orf78-202ENST00000461349 CEP126Q9P2H0 1117 aa15.83■□□□□ 0.12
C9orf78-202ENST00000461349 MROH7-TTC4A0A0A0MT08 1334 aa15.83■□□□□ 0.12
C9orf78-202ENST00000461349 TTC28Q96AY4 2481 aa15.83■□□□□ 0.12
C9orf78-202ENST00000461349 MSCO60682 206 aa15.82■□□□□ 0.12
C9orf78-202ENST00000461349 NPM3O75607 178 aaKnown RBP15.82■□□□□ 0.12
C9orf78-202ENST00000461349 HOXA7P31268 230 aaPredicted RBP15.82■□□□□ 0.12
C9orf78-202ENST00000461349 PHKA1P46020 1223 aa15.82■□□□□ 0.12
C9orf78-202ENST00000461349 RTP1P59025 263 aa15.82■□□□□ 0.12
C9orf78-202ENST00000461349 MTMR2Q13614 643 aa15.82■□□□□ 0.12
C9orf78-202ENST00000461349 TJAP1Q5JTD0 557 aa15.82■□□□□ 0.12
C9orf78-202ENST00000461349 MFSD14CQ5VZR4 134 aa15.82■□□□□ 0.12
C9orf78-202ENST00000461349 GPR142Q7Z601 462 aa15.82■□□□□ 0.12
C9orf78-202ENST00000461349 PLEKHH3Q7Z736 793 aa15.82■□□□□ 0.12
C9orf78-202ENST00000461349 GTF3C2Q8WUA4 911 aaPredicted RBP15.82■□□□□ 0.12
C9orf78-202ENST00000461349 USP6NLQ92738 828 aa15.82■□□□□ 0.12
C9orf78-202ENST00000461349 TXNRD2Q9NNW7 524 aa15.82■□□□□ 0.12
C9orf78-202ENST00000461349 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
C9orf78-202ENST00000461349 DNM1LO00429 736 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 GLRX3O76003 335 aaKnown RBP15.81■□□□□ 0.12
C9orf78-202ENST00000461349 CNGA1P29973 690 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 BACE1P56817 501 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 ERVK-9P63128 1117 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 ERVK-24P63145 666 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 MORN1Q5T089 497 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 ATG9AQ7Z3C6 839 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 PAGR1Q9BTK6 254 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 SIL1Q9H173 461 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 TTYH1Q9H313 450 aaPredicted RBP15.81■□□□□ 0.12
C9orf78-202ENST00000461349 PRDM5Q9NQX1 630 aaPredicted RBP15.81■□□□□ 0.12
C9orf78-202ENST00000461349 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 ATP11BQ9Y2G3 1177 aa15.81■□□□□ 0.12
C9orf78-202ENST00000461349 GPR75-ASB3A0A0A6YYF3 556 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms