RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 GSTO1P78417 241 aa12.72□□□□□ -0.37
IFT88-204ENST00000461115 CAVIN1Q6NZI2 390 aaKnown RBP12.72□□□□□ -0.37
IFT88-204ENST00000461115 CTR9Q6PD62 1173 aa12.72□□□□□ -0.37
IFT88-204ENST00000461115 FAM184AQ8NB25 1140 aa12.72□□□□□ -0.37
IFT88-204ENST00000461115 SLAIN1Q8ND83 568 aa12.72□□□□□ -0.37
IFT88-204ENST00000461115 TBC1D22AQ8WUA7 517 aa12.72□□□□□ -0.37
IFT88-204ENST00000461115 SDR42E1Q8WUS8 393 aa12.72□□□□□ -0.37
IFT88-204ENST00000461115 CRNKL1Q9BZJ0 848 aaKnown RBP12.72□□□□□ -0.37
IFT88-204ENST00000461115 NCOA5Q9HCD5 579 aaKnown RBP12.72□□□□□ -0.37
IFT88-204ENST00000461115 DCP1AQ9NPI6 582 aaPredicted RBP12.72□□□□□ -0.37
IFT88-204ENST00000461115 ARPP21Q9UBL0 812 aaPredicted RBP12.72□□□□□ -0.37
IFT88-204ENST00000461115 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
IFT88-204ENST00000461115 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
IFT88-204ENST00000461115 CDKL5O76039 1030 aa12.71□□□□□ -0.37
IFT88-204ENST00000461115 UFL1O94874 794 aa12.71□□□□□ -0.37
IFT88-204ENST00000461115 LDHBP07195 334 aaKnown RBP12.71□□□□□ -0.37
IFT88-204ENST00000461115 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
IFT88-204ENST00000461115 POTEAQ6S8J7 498 aa12.71□□□□□ -0.37
IFT88-204ENST00000461115 TTC6Q86TZ1 520 aa12.71□□□□□ -0.37
IFT88-204ENST00000461115 SLC51AQ86UW1 340 aa12.71□□□□□ -0.37
IFT88-204ENST00000461115 FBXO18Q8NFZ0 1043 aa12.71□□□□□ -0.37
IFT88-204ENST00000461115 SYAP1Q96A49 352 aaPredicted RBP12.71□□□□□ -0.37
IFT88-204ENST00000461115 SUGT1Q9Y2Z0 365 aa12.71□□□□□ -0.37
IFT88-204ENST00000461115 GAKO14976 1311 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 ZBTB43O43298 467 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 IFNAR1P17181 557 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.38
IFT88-204ENST00000461115 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.38
IFT88-204ENST00000461115 SART3Q15020 963 aaKnown RBP12.71□□□□□ -0.38
IFT88-204ENST00000461115 SLC15A2Q16348 729 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 TMEM67Q5HYA8 995 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 ESR2Q92731 530 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 DDX11Q96FC9 970 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 MASTLQ96GX5 879 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 COA1Q9GZY4 146 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 GRPEL1Q9HAV7 217 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 GDPD2Q9HCC8 539 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 PARP3Q9Y6F1 533 aa12.71□□□□□ -0.38
IFT88-204ENST00000461115 MYH1P12882 1939 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 GPR75-ASB3A0A0A6YYF3 556 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 G3V3G9 751 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 H3BQV1 296 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 IFIT3O14879 490 aaKnown RBP12.7□□□□□ -0.38
IFT88-204ENST00000461115 DTNBO60941 627 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 MMP10P09238 476 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 CHAF1AQ13111 956 aaPredicted RBP12.7□□□□□ -0.38
IFT88-204ENST00000461115 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 STYK1Q6J9G0 422 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 LRSAM1Q6UWE0 723 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 RTFDC1Q9BY42 306 aaPredicted RBP12.7□□□□□ -0.38
IFT88-204ENST00000461115 SENP2Q9HC62 589 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 INCENPQ9NQS7 918 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
IFT88-204ENST00000461115 RCOR1Q9UKL0 485 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 CFAP45Q9UL16 551 aa12.7□□□□□ -0.38
IFT88-204ENST00000461115 MROH7-TTC4A0A0A0MT08 1334 aa12.69□□□□□ -0.38
IFT88-204ENST00000461115 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
IFT88-204ENST00000461115 USP17L12C9JPN9 530 aa12.69□□□□□ -0.38
IFT88-204ENST00000461115 USP17L21D6R901 530 aa12.69□□□□□ -0.38
IFT88-204ENST00000461115 LETM1O95202 739 aaPredicted RBP12.69□□□□□ -0.38
IFT88-204ENST00000461115 CDC27P30260 824 aa12.69□□□□□ -0.38
IFT88-204ENST00000461115 CPLX2Q6PUV4 134 aaKnown RBP12.69□□□□□ -0.38
IFT88-204ENST00000461115 FERMT3Q86UX7 667 aa12.69□□□□□ -0.38
IFT88-204ENST00000461115 DZIP1Q86YF9 867 aaKnown RBP12.69□□□□□ -0.38
IFT88-204ENST00000461115 LEO1Q8WVC0 666 aaPredicted RBP12.69□□□□□ -0.38
IFT88-204ENST00000461115 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
IFT88-204ENST00000461115 AATFQ9NY61 560 aaKnown RBP eCLIP12.69□□□□□ -0.38
IFT88-204ENST00000461115 ORC3Q9UBD5 711 aaPredicted RBP12.69□□□□□ -0.38
IFT88-204ENST00000461115 SLC12A7Q9Y666 1083 aa12.69□□□□□ -0.38
IFT88-204ENST00000461115 PSME4Q14997 1843 aa12.68□□□□□ -0.38
IFT88-204ENST00000461115 KIF13BQ9NQT8 1826 aa12.68□□□□□ -0.38
IFT88-204ENST00000461115 CPLX1O14810 134 aa12.68□□□□□ -0.38
IFT88-204ENST00000461115 FIBPO43427 364 aa12.68□□□□□ -0.38
IFT88-204ENST00000461115 BAG3O95817 575 aa12.68□□□□□ -0.38
IFT88-204ENST00000461115 WTAPQ15007 396 aa12.68□□□□□ -0.38
IFT88-204ENST00000461115 GRIK5Q16478 980 aa12.68□□□□□ -0.38
IFT88-204ENST00000461115 C12orf60Q5U649 245 aa12.68□□□□□ -0.38
IFT88-204ENST00000461115 BRAPQ7Z569 592 aa12.68□□□□□ -0.38
IFT88-204ENST00000461115 ILDR1Q86SU0 546 aaPredicted RBP12.68□□□□□ -0.38
IFT88-204ENST00000461115 RBM27Q9P2N5 1060 aaKnown RBP12.68□□□□□ -0.38
IFT88-204ENST00000461115 CCDC196A0A1B0GTZ2 297 aa12.67□□□□□ -0.38
IFT88-204ENST00000461115 ERICH2A1L162 156 aa12.67□□□□□ -0.38
IFT88-204ENST00000461115 CCDC69A6NI79 296 aa12.67□□□□□ -0.38
IFT88-204ENST00000461115 MINDY4BA8MYZ0 360 aa12.67□□□□□ -0.38
IFT88-204ENST00000461115 RANBP6O60518 1105 aaKnown RBP12.67□□□□□ -0.38
IFT88-204ENST00000461115 FKBP1AP62942 108 aaKnown RBP12.67□□□□□ -0.38
IFT88-204ENST00000461115 CCDC183Q5T5S1 534 aa12.67□□□□□ -0.38
IFT88-204ENST00000461115 FAM173BQ6P4H8 233 aa12.67□□□□□ -0.38
IFT88-204ENST00000461115 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
IFT88-204ENST00000461115 SLF2Q8IX21 1173 aa12.67□□□□□ -0.38
IFT88-204ENST00000461115 MPNDQ8N594 471 aa12.67□□□□□ -0.38
IFT88-204ENST00000461115 C8orf76Q96K31 380 aa12.67□□□□□ -0.38
IFT88-204ENST00000461115 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
IFT88-204ENST00000461115 GOLGA8AA7E2F4 631 aa12.66□□□□□ -0.38
IFT88-204ENST00000461115 FMNL1O95466 1100 aaPredicted RBP12.66□□□□□ -0.38
IFT88-204ENST00000461115 SLC3A2P08195 630 aaKnown RBP12.66□□□□□ -0.38
IFT88-204ENST00000461115 SYNE3Q6ZMZ3 975 aa12.66□□□□□ -0.38
IFT88-204ENST00000461115 ZNF654Q8IZM8 581 aa12.66□□□□□ -0.38
IFT88-204ENST00000461115 ENAHQ8N8S7 591 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms