RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 TTC38Q5R3I4 469 aa13.67□□□□□ -0.22
CPNE6-202ENST00000460657 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
CPNE6-202ENST00000460657 PUS7LQ9H0K6 701 aaKnown RBP13.67□□□□□ -0.22
CPNE6-202ENST00000460657 SPTLC3Q9NUV7 552 aa13.67□□□□□ -0.22
CPNE6-202ENST00000460657 ADD2P35612 726 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 RABL6Q3YEC7 729 aaPredicted RBP13.66□□□□□ -0.22
CPNE6-202ENST00000460657 SMARCC2Q8TAQ2 1214 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 CARD10Q9BWT7 1032 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 LRRC27Q9C0I9 530 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 BTBD18B2RXH4 712 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 MPHOSPH10O00566 681 aaKnown RBP13.66□□□□□ -0.22
CPNE6-202ENST00000460657 IKBKBO14920 756 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 PRDM1O75626 825 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 ETF1P62495 437 aaKnown RBP13.66□□□□□ -0.22
CPNE6-202ENST00000460657 WWC2Q6AWC2 1192 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 DIP2BQ9P265 1576 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 LMAN1P49257 510 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 KRT83P78385 493 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 MCM6Q14566 821 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 ZSCAN29Q8IWY8 852 aaPredicted RBP13.66□□□□□ -0.22
CPNE6-202ENST00000460657 CLIC6Q96NY7 704 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 CCDC87Q9NVE4 849 aa13.66□□□□□ -0.22
CPNE6-202ENST00000460657 H0YHG0 523 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 NAPAP54920 295 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 ASIC1P78348 528 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 PPARAQ07869 468 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 CCDC96Q2M329 555 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 TRMT44Q8IYL2 757 aaKnown RBP13.65□□□□□ -0.22
CPNE6-202ENST00000460657 ANKRD2Q9GZV1 360 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 CCT6AP40227 531 aaKnown RBP13.65□□□□□ -0.22
CPNE6-202ENST00000460657 CT47A1Q5JQC4 288 aaPredicted RBP13.65□□□□□ -0.22
CPNE6-202ENST00000460657 USPL1Q5W0Q7 1092 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 FANCBQ8NB91 859 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 FANCLQ9NW38 375 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 PUF60Q9UHX1 559 aaKnown RBP13.65□□□□□ -0.22
CPNE6-202ENST00000460657 CTNND2Q9UQB3 1225 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 LUC7L2Q9Y383 392 aaKnown RBP13.65□□□□□ -0.22
CPNE6-202ENST00000460657 AKR1B10O60218 316 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 SLFNL1Q499Z3 407 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 TRIML1Q8N9V2 468 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 SLAIN2Q9P270 581 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 TUBBP07437 444 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 CCDC40Q4G0X9 1142 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 PIK3AP1Q6ZUJ8 805 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 VPS54Q9P1Q0 977 aa13.65□□□□□ -0.22
CPNE6-202ENST00000460657 UTYO14607 1347 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 KRT86O43790 486 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 TRIM14Q14142 442 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 PLA2G4DQ86XP0 818 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 C6orf50Q9HD87 102 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
CPNE6-202ENST00000460657 PCDHA5Q9Y5H7 936 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 RBM5P52756 815 aaKnown RBP eCLIP13.64□□□□□ -0.23
CPNE6-202ENST00000460657 ASAP1Q9ULH1 1129 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 TTF2Q9UNY4 1162 aaKnown RBP13.64□□□□□ -0.23
CPNE6-202ENST00000460657 BICDL2A1A5D9 508 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 ERLIN2O94905 339 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 ZNF76P36508 570 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 SYCP1Q15431 976 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 CDCA7Q9BWT1 371 aaPredicted RBP13.64□□□□□ -0.23
CPNE6-202ENST00000460657 ANKRD26Q9UPS8 1709 aa13.64□□□□□ -0.23
CPNE6-202ENST00000460657 SH2B2O14492 632 aaPredicted RBP13.63□□□□□ -0.23
CPNE6-202ENST00000460657 TUBB2AQ13885 445 aa13.63□□□□□ -0.23
CPNE6-202ENST00000460657 TPTE2Q6XPS3 522 aa13.63□□□□□ -0.23
CPNE6-202ENST00000460657 KCNB2Q92953 911 aa13.63□□□□□ -0.23
CPNE6-202ENST00000460657 TUBB2BQ9BVA1 445 aa13.63□□□□□ -0.23
CPNE6-202ENST00000460657 VPS16Q9H269 839 aa13.63□□□□□ -0.23
CPNE6-202ENST00000460657 GUCA1BQ9UMX6 200 aa13.63□□□□□ -0.23
CPNE6-202ENST00000460657 CRACR2BQ8N4Y2 399 aaPredicted RBP13.63□□□□□ -0.23
CPNE6-202ENST00000460657 TSPYL1Q9H0U9 437 aa13.63□□□□□ -0.23
CPNE6-202ENST00000460657 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
CPNE6-202ENST00000460657 NAA15Q9BXJ9 866 aaKnown RBP13.63□□□□□ -0.23
CPNE6-202ENST00000460657 PAK1Q13153 545 aa13.63□□□□□ -0.23
CPNE6-202ENST00000460657 ERCC6LQ2NKX8 1250 aa13.63□□□□□ -0.23
CPNE6-202ENST00000460657 C6orf229H3BNL8 230 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 GNA11P29992 359 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 CMTR1Q8N1G2 835 aaKnown RBP13.62□□□□□ -0.23
CPNE6-202ENST00000460657 PPP1R13BQ96KQ4 1090 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.62□□□□□ -0.23
CPNE6-202ENST00000460657 KIAA0754O94854 1291 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 HIBADHP31937 336 aaKnown RBP13.62□□□□□ -0.23
CPNE6-202ENST00000460657 ADKP55263 362 aaKnown RBP13.62□□□□□ -0.23
CPNE6-202ENST00000460657 KIF5AQ12840 1032 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 STOX1Q6ZVD7 989 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 NLRP10Q86W26 655 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 TMTC1Q8IUR5 882 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 TNKSO95271 1327 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 hCG_1642624A0A1W2PR95 340 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
CPNE6-202ENST00000460657 LDHBP07195 334 aaKnown RBP13.62□□□□□ -0.23
CPNE6-202ENST00000460657 PLCD1P51178 756 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 CTR9Q6PD62 1173 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 WWC3Q9ULE0 1092 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 FMNL1O95466 1100 aaPredicted RBP13.62□□□□□ -0.23
CPNE6-202ENST00000460657 RFC4P35249 363 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms