RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-208ENST00000460125 CCND3P30281 292 aaPredicted RBP13.64□□□□□ -0.23
NUCB1-208ENST00000460125 ANKRD44Q8N8A2 993 aa13.64□□□□□ -0.23
NUCB1-208ENST00000460125 ZNF280CQ8ND82 737 aa13.64□□□□□ -0.23
NUCB1-208ENST00000460125 SOCS4Q8WXH5 440 aa13.64□□□□□ -0.23
NUCB1-208ENST00000460125 TTYH1Q9H313 450 aaPredicted RBP13.64□□□□□ -0.23
NUCB1-208ENST00000460125 DOCK2Q92608 1830 aa13.64□□□□□ -0.23
NUCB1-208ENST00000460125 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
NUCB1-208ENST00000460125 DOCK1Q14185 1865 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 TNFRSF10AO00220 468 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 TBC1D12O60347 775 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 SLC5A1P13866 664 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 ZKSCAN1P17029 563 aaPredicted RBP13.63□□□□□ -0.23
NUCB1-208ENST00000460125 HMGCS2P54868 508 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 SHHQ15465 462 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 SH3D19Q5HYK7 790 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 SLC4A10Q6U841 1118 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 KLHDC4Q8TBB5 520 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 LPIN2Q92539 896 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 USP6NLQ92738 828 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 TBC1D2Q9BYX2 928 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 SENP6Q9GZR1 1112 aaPredicted RBP13.63□□□□□ -0.23
NUCB1-208ENST00000460125 DDX4Q9NQI0 724 aaKnown RBP13.63□□□□□ -0.23
NUCB1-208ENST00000460125 RAPGEFL1Q9UHV5 662 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 GAKO14976 1311 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 SALL1Q9NSC2 1324 aa13.63□□□□□ -0.23
NUCB1-208ENST00000460125 MUC3AQ02505 3323 aa13.62□□□□□ -0.23
NUCB1-208ENST00000460125 ANP32CO43423 234 aa13.62□□□□□ -0.23
NUCB1-208ENST00000460125 FOSL2P15408 326 aa13.62□□□□□ -0.23
NUCB1-208ENST00000460125 SMAD3P84022 425 aaKnown RBP13.62□□□□□ -0.23
NUCB1-208ENST00000460125 TJAP1Q5JTD0 557 aa13.62□□□□□ -0.23
NUCB1-208ENST00000460125 OSBPL5Q9H0X9 879 aaPredicted RBP13.62□□□□□ -0.23
NUCB1-208ENST00000460125 EXOSC9Q06265 439 aaKnown RBP13.61□□□□□ -0.23
NUCB1-208ENST00000460125 CCL14Q16627 93 aa13.61□□□□□ -0.23
NUCB1-208ENST00000460125 C9orf50Q5SZB4 431 aa13.61□□□□□ -0.23
NUCB1-208ENST00000460125 GPRC5AQ8NFJ5 357 aa13.61□□□□□ -0.23
NUCB1-208ENST00000460125 P2RX7Q99572 595 aaKnown RBP13.61□□□□□ -0.23
NUCB1-208ENST00000460125 PRKRIP1Q9H875 184 aaPredicted RBP13.61□□□□□ -0.23
NUCB1-208ENST00000460125 TXNRD2Q9NNW7 524 aa13.61□□□□□ -0.23
NUCB1-208ENST00000460125 PRKAG2Q9UGJ0 569 aa13.61□□□□□ -0.23
NUCB1-208ENST00000460125 LOC285556D6RIA3 1793 aa13.6□□□□□ -0.23
NUCB1-208ENST00000460125 PEX10O60683 326 aa13.6□□□□□ -0.23
NUCB1-208ENST00000460125 MAPK4P31152 587 aa13.6□□□□□ -0.23
NUCB1-208ENST00000460125 HOXA7P31268 230 aaPredicted RBP13.6□□□□□ -0.23
NUCB1-208ENST00000460125 PLA2G5P39877 138 aa13.6□□□□□ -0.23
NUCB1-208ENST00000460125 RGS2P41220 211 aa13.6□□□□□ -0.23
NUCB1-208ENST00000460125 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
NUCB1-208ENST00000460125 PICALMQ13492 652 aa13.6□□□□□ -0.23
NUCB1-208ENST00000460125 PDE3AQ14432 1141 aa13.6□□□□□ -0.23
NUCB1-208ENST00000460125 MORN1Q5T089 497 aa13.6□□□□□ -0.23
NUCB1-208ENST00000460125 FAM163AQ96GL9 167 aaPredicted RBP13.6□□□□□ -0.23
NUCB1-208ENST00000460125 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.6□□□□□ -0.23
NUCB1-208ENST00000460125 GNL3LQ9NVN8 582 aaKnown RBP13.6□□□□□ -0.23
NUCB1-208ENST00000460125 CDH23Q9H251 3354 aa13.59□□□□□ -0.23
NUCB1-208ENST00000460125 FAM196BA6NMK8 535 aa13.59□□□□□ -0.23
NUCB1-208ENST00000460125 USP17L5A8MUK1 530 aa13.59□□□□□ -0.23
NUCB1-208ENST00000460125 EYA2O00167 538 aa13.59□□□□□ -0.23
NUCB1-208ENST00000460125 RTP1P59025 263 aa13.59□□□□□ -0.23
NUCB1-208ENST00000460125 IRX3P78415 501 aaPredicted RBP13.59□□□□□ -0.23
NUCB1-208ENST00000460125 Q3C1V9 767 aa13.59□□□□□ -0.23
NUCB1-208ENST00000460125 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
NUCB1-208ENST00000460125 RBPJLQ9UBG7 517 aa13.59□□□□□ -0.23
NUCB1-208ENST00000460125 DENND2AQ9ULE3 1009 aa13.59□□□□□ -0.23
NUCB1-208ENST00000460125 DNAH12Q6ZR08 3092 aa13.58□□□□□ -0.23
NUCB1-208ENST00000460125 MAST2Q6P0Q8 1798 aa13.58□□□□□ -0.23
NUCB1-208ENST00000460125 TMEM265A0A087WTH1 108 aa13.58□□□□□ -0.24
NUCB1-208ENST00000460125 SEMA3EO15041 775 aa13.58□□□□□ -0.24
NUCB1-208ENST00000460125 ZBTB22O15209 634 aa13.58□□□□□ -0.24
NUCB1-208ENST00000460125 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
NUCB1-208ENST00000460125 CAP2P40123 477 aa13.58□□□□□ -0.24
NUCB1-208ENST00000460125 HERVK_113P62684 666 aa13.58□□□□□ -0.24
NUCB1-208ENST00000460125 RRP1BQ14684 758 aaKnown RBP13.58□□□□□ -0.24
NUCB1-208ENST00000460125 GPR142Q7Z601 462 aa13.58□□□□□ -0.24
NUCB1-208ENST00000460125 ZGPATQ8N5A5 531 aaKnown RBP13.58□□□□□ -0.24
NUCB1-208ENST00000460125 APBA2Q99767 749 aa13.58□□□□□ -0.24
NUCB1-208ENST00000460125 AS3MTQ9HBK9 375 aa13.58□□□□□ -0.24
NUCB1-208ENST00000460125 MYH13Q9UKX3 1938 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 BTDP43251 543 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 RFX5P48382 616 aaPredicted RBP13.57□□□□□ -0.24
NUCB1-208ENST00000460125 RHBDL3P58872 404 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 ATG9AQ7Z3C6 839 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 PLEKHH3Q7Z736 793 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 SLF2Q8IX21 1173 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 MIER1Q8N108 512 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 USP38Q8NB14 1042 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 LPAR1Q92633 364 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 FAM122AQ96E09 287 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 WDR18Q9BV38 432 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 PORCNQ9H237 461 aa13.57□□□□□ -0.24
NUCB1-208ENST00000460125 DDX20Q9UHI6 824 aaKnown RBP13.57□□□□□ -0.24
NUCB1-208ENST00000460125 LTBP2Q14767 1821 aa13.56□□□□□ -0.24
NUCB1-208ENST00000460125 DNM1LO00429 736 aa13.56□□□□□ -0.24
NUCB1-208ENST00000460125 MSCO60682 206 aa13.56□□□□□ -0.24
NUCB1-208ENST00000460125 PHKA1P46020 1223 aa13.56□□□□□ -0.24
NUCB1-208ENST00000460125 BACE1P56817 501 aa13.56□□□□□ -0.24
NUCB1-208ENST00000460125 ERVK-9P63128 1117 aa13.56□□□□□ -0.24
NUCB1-208ENST00000460125 ERVK-24P63145 666 aa13.56□□□□□ -0.24
NUCB1-208ENST00000460125 MAP2K5Q13163 448 aa13.56□□□□□ -0.24
NUCB1-208ENST00000460125 DZIP1Q86YF9 867 aaKnown RBP13.56□□□□□ -0.24
NUCB1-208ENST00000460125 CCAR1Q8IX12 1150 aaKnown RBP13.56□□□□□ -0.24
NUCB1-208ENST00000460125 BADQ92934 168 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms