RNA–Protein interactions for RNA: ENST00000460007.1

SVIL-204, Transcript of supervillin, humanhuman

TSL 3

Gene SVIL, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-204ENST00000460007 CDK5RAP2Q96SN8 1893 aa22.75■■□□□ 1.23
SVIL-204ENST00000460007 CTCFP49711 727 aaPredicted RBP22.74■■□□□ 1.23
SVIL-204ENST00000460007 SLC4A8Q2Y0W8 1093 aa22.74■■□□□ 1.23
SVIL-204ENST00000460007 PLEKHM2Q8IWE5 1019 aa22.74■■□□□ 1.23
SVIL-204ENST00000460007 CRACR2BQ8N4Y2 399 aaPredicted RBP22.74■■□□□ 1.23
SVIL-204ENST00000460007 EVI5LQ96CN4 794 aa22.74■■□□□ 1.23
SVIL-204ENST00000460007 PUS7LQ9H0K6 701 aaKnown RBP22.74■■□□□ 1.23
SVIL-204ENST00000460007 FOXP4Q8IVH2 680 aaPredicted RBP22.73■■□□□ 1.23
SVIL-204ENST00000460007 SCYL3Q8IZE3 742 aa22.73■■□□□ 1.23
SVIL-204ENST00000460007 SDR42E1Q8WUS8 393 aa22.73■■□□□ 1.23
SVIL-204ENST00000460007 PICK1Q9NRD5 415 aa22.73■■□□□ 1.23
SVIL-204ENST00000460007 CTNND1O60716 968 aaKnown RBP22.72■■□□□ 1.23
SVIL-204ENST00000460007 NEFLP07196 543 aa22.72■■□□□ 1.23
SVIL-204ENST00000460007 TM4SF4P48230 202 aa22.72■■□□□ 1.23
SVIL-204ENST00000460007 INHBEP58166 350 aa22.72■■□□□ 1.23
SVIL-204ENST00000460007 TTC6Q86TZ1 520 aa22.72■■□□□ 1.23
SVIL-204ENST00000460007 OSBPL3Q9H4L5 887 aa22.72■■□□□ 1.23
SVIL-204ENST00000460007 PRKAB2O43741 272 aa22.71■■□□□ 1.23
SVIL-204ENST00000460007 POLR3DP05423 398 aaPredicted RBP22.71■■□□□ 1.23
SVIL-204ENST00000460007 PPATQ06203 517 aa22.71■■□□□ 1.23
SVIL-204ENST00000460007 PPIL2Q13356 520 aa22.71■■□□□ 1.23
SVIL-204ENST00000460007 OSBP2Q969R2 916 aa22.71■■□□□ 1.23
SVIL-204ENST00000460007 DDRGK1Q96HY6 314 aa22.71■■□□□ 1.23
SVIL-204ENST00000460007 DCP1AQ9NPI6 582 aaPredicted RBP22.71■■□□□ 1.23
SVIL-204ENST00000460007 ATP8A2Q9NTI2 1148 aa22.71■■□□□ 1.23
SVIL-204ENST00000460007 RNF186Q9NXI6 227 aa22.71■■□□□ 1.23
SVIL-204ENST00000460007 MCM9Q9NXL9 1143 aa22.71■■□□□ 1.23
SVIL-204ENST00000460007 SAGE1Q9NXZ1 904 aa22.71■■□□□ 1.23
SVIL-204ENST00000460007 SLC4A4Q9Y6R1 1079 aa22.71■■□□□ 1.23
SVIL-204ENST00000460007 TRIM6-TRIM34B2RNG4 842 aa22.7■■□□□ 1.22
SVIL-204ENST00000460007 HSPA8P11142 646 aaKnown RBP22.7■■□□□ 1.22
SVIL-204ENST00000460007 GTF2A2P52657 109 aa22.7■■□□□ 1.22
SVIL-204ENST00000460007 METTL16Q86W50 562 aaKnown RBP22.7■■□□□ 1.22
SVIL-204ENST00000460007 TSKSQ9UJT2 592 aa22.7■■□□□ 1.22
SVIL-204ENST00000460007 IRF6O14896 467 aa22.69■■□□□ 1.22
SVIL-204ENST00000460007 TRPA1O75762 1119 aa22.69■■□□□ 1.22
SVIL-204ENST00000460007 STRBPQ96SI9 672 aaKnown RBP22.69■■□□□ 1.22
SVIL-204ENST00000460007 EHD4Q9H223 541 aa22.69■■□□□ 1.22
SVIL-204ENST00000460007 DNAJC18Q9H819 358 aa22.69■■□□□ 1.22
SVIL-204ENST00000460007 SERPINB13Q9UIV8 391 aa22.69■■□□□ 1.22
SVIL-204ENST00000460007 MYH1P12882 1939 aa22.69■■□□□ 1.22
SVIL-204ENST00000460007 GPAA1O43292 621 aa22.68■■□□□ 1.22
SVIL-204ENST00000460007 PDE4AP27815 886 aa22.68■■□□□ 1.22
SVIL-204ENST00000460007 LBX1P52954 281 aa22.68■■□□□ 1.22
SVIL-204ENST00000460007 SNAPC2Q13487 334 aa22.68■■□□□ 1.22
SVIL-204ENST00000460007 RILPL2Q969X0 211 aa22.68■■□□□ 1.22
SVIL-204ENST00000460007 MS4A4AQ96JQ5 239 aa22.68■■□□□ 1.22
SVIL-204ENST00000460007 NAV1Q8NEY1 1877 aa22.68■■□□□ 1.22
SVIL-204ENST00000460007 SIPA1L1O43166 1804 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 CCL15-CCL14A0A0B4J2E2 113 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 TESPA1A2RU30 521 aaPredicted RBP22.67■■□□□ 1.22
SVIL-204ENST00000460007 M0R2C6 588 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 PTPRAP18433 802 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 CAP2P40123 477 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 PLCD1P51178 756 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 CCL15Q16663 113 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 ZMYM1Q5SVZ6 1142 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 OTUD7BQ6GQQ9 843 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 IFNL1Q8IU54 200 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 AMOTL1Q8IY63 956 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 ZHX2Q9Y6X8 837 aa22.67■■□□□ 1.22
SVIL-204ENST00000460007 DDX60LQ5H9U9 1706 aaKnown RBP22.66■■□□□ 1.22
SVIL-204ENST00000460007 ALDH1A1P00352 501 aa22.66■■□□□ 1.22
SVIL-204ENST00000460007 CETPP11597 493 aa22.66■■□□□ 1.22
SVIL-204ENST00000460007 GNAT2P19087 354 aa22.66■■□□□ 1.22
SVIL-204ENST00000460007 RRP1BQ14684 758 aaKnown RBP22.66■■□□□ 1.22
SVIL-204ENST00000460007 TICAM2Q86XR7 235 aa22.66■■□□□ 1.22
SVIL-204ENST00000460007 BRI3BPQ8WY22 251 aa22.66■■□□□ 1.22
SVIL-204ENST00000460007 IGF2BP3O00425 579 aaKnown RBP eCLIP22.65■■□□□ 1.22
SVIL-204ENST00000460007 SEC62Q99442 399 aaKnown RBP22.65■■□□□ 1.22
SVIL-204ENST00000460007 KCNH4Q9UQ05 1017 aa22.65■■□□□ 1.22
SVIL-204ENST00000460007 DOCK1Q14185 1865 aa22.64■■□□□ 1.22
SVIL-204ENST00000460007 CYP2D6P10635 497 aa22.64■■□□□ 1.21
SVIL-204ENST00000460007 CENPQQ7L2Z9 268 aaPredicted RBP22.64■■□□□ 1.21
SVIL-204ENST00000460007 PRDM10Q9NQV6 1147 aa22.64■■□□□ 1.21
SVIL-204ENST00000460007 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.64■■□□□ 1.21
SVIL-204ENST00000460007 USP17L12C9JPN9 530 aa22.63■■□□□ 1.21
SVIL-204ENST00000460007 USP17L21D6R901 530 aa22.63■■□□□ 1.21
SVIL-204ENST00000460007 CXCL11O14625 94 aa22.63■■□□□ 1.21
SVIL-204ENST00000460007 GDF11O95390 407 aa22.63■■□□□ 1.21
SVIL-204ENST00000460007 APPP05067 770 aa22.63■■□□□ 1.21
SVIL-204ENST00000460007 ASNSP08243 561 aa22.63■■□□□ 1.21
SVIL-204ENST00000460007 GIMAP6Q6P9H5 292 aa22.63■■□□□ 1.21
SVIL-204ENST00000460007 PTPN18Q99952 460 aa22.63■■□□□ 1.21
SVIL-204ENST00000460007 GINM1Q9NU53 330 aa22.63■■□□□ 1.21
SVIL-204ENST00000460007 LAMB1P07942 1786 aa22.63■■□□□ 1.21
SVIL-204ENST00000460007 GSG1L2A8MUP6 293 aa22.62■■□□□ 1.21
SVIL-204ENST00000460007 EVX2Q03828 476 aa22.62■■□□□ 1.21
SVIL-204ENST00000460007 GABPAQ06546 454 aa22.62■■□□□ 1.21
SVIL-204ENST00000460007 C12orf60Q5U649 245 aa22.62■■□□□ 1.21
SVIL-204ENST00000460007 TATDN1Q6P1N9 297 aa22.62■■□□□ 1.21
SVIL-204ENST00000460007 CCDC84Q86UT8 332 aaPredicted RBP22.62■■□□□ 1.21
SVIL-204ENST00000460007 TBC1D2Q9BYX2 928 aa22.62■■□□□ 1.21
SVIL-204ENST00000460007 ARPP21Q9UBL0 812 aaPredicted RBP22.62■■□□□ 1.21
SVIL-204ENST00000460007 AFG3L2Q9Y4W6 797 aa22.62■■□□□ 1.21
SVIL-204ENST00000460007 CYP2D7A0A087X1C5 515 aa22.61■■□□□ 1.21
SVIL-204ENST00000460007 TRIM75PA6NK02 468 aa22.61■■□□□ 1.21
SVIL-204ENST00000460007 USP17L5A8MUK1 530 aa22.61■■□□□ 1.21
SVIL-204ENST00000460007 TBC1D8O95759 1140 aa22.61■■□□□ 1.21
SVIL-204ENST00000460007 SHMT1P34896 483 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms