RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 G2E3Q7L622 706 aa17.16■□□□□ 0.34
PCOLCE-202ENST00000460002 VPS37DQ86XT2 251 aa17.16■□□□□ 0.34
PCOLCE-202ENST00000460002 C11orf16Q9NQ32 467 aa17.16■□□□□ 0.34
PCOLCE-202ENST00000460002 SUGT1Q9Y2Z0 365 aa17.16■□□□□ 0.34
PCOLCE-202ENST00000460002 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 CTNND1O60716 968 aaKnown RBP17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 MAP3K10Q02779 954 aa17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 TAF7LQ5H9L4 462 aa17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 LPAR1Q92633 364 aa17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 PCGF6Q9BYE7 350 aa17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 MYH16Q9H6N6 1097 aa17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 DDX20Q9UHI6 824 aaKnown RBP17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 LRRFIP2Q9Y608 721 aaKnown RBP17.15■□□□□ 0.34
PCOLCE-202ENST00000460002 SNX17Q15036 470 aa17.14■□□□□ 0.33
PCOLCE-202ENST00000460002 CCDC57Q2TAC2 916 aa17.14■□□□□ 0.33
PCOLCE-202ENST00000460002 EPHA10Q5JZY3 1008 aa17.14■□□□□ 0.33
PCOLCE-202ENST00000460002 SH3BP5LQ7L8J4 393 aa17.14■□□□□ 0.33
PCOLCE-202ENST00000460002 P2RX7Q99572 595 aaKnown RBP17.14■□□□□ 0.33
PCOLCE-202ENST00000460002 PUS3Q9BZE2 481 aaKnown RBP17.14■□□□□ 0.33
PCOLCE-202ENST00000460002 TXNRD2Q9NNW7 524 aa17.14■□□□□ 0.33
PCOLCE-202ENST00000460002 TCF20Q9UGU0 1960 aaKnown RBP17.14■□□□□ 0.33
PCOLCE-202ENST00000460002 XIRP2A4UGR9 3374 aa17.14■□□□□ 0.33
PCOLCE-202ENST00000460002 DOCK1Q14185 1865 aa17.14■□□□□ 0.33
PCOLCE-202ENST00000460002 LOC285556D6RIA3 1793 aa17.13■□□□□ 0.33
PCOLCE-202ENST00000460002 RGS2P41220 211 aa17.13■□□□□ 0.33
PCOLCE-202ENST00000460002 SPP2Q13103 211 aa17.13■□□□□ 0.33
PCOLCE-202ENST00000460002 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
PCOLCE-202ENST00000460002 MORN1Q5T089 497 aa17.13■□□□□ 0.33
PCOLCE-202ENST00000460002 TSPYL6Q8N831 410 aa17.13■□□□□ 0.33
PCOLCE-202ENST00000460002 APBA2Q99767 749 aa17.13■□□□□ 0.33
PCOLCE-202ENST00000460002 CXXC1Q9P0U4 656 aaPredicted RBP17.13■□□□□ 0.33
PCOLCE-202ENST00000460002 RLFQ13129 1914 aa17.12■□□□□ 0.33
PCOLCE-202ENST00000460002 FAM86C2PA6NEL3 165 aa17.12■□□□□ 0.33
PCOLCE-202ENST00000460002 KCNQ1P51787 676 aa17.12■□□□□ 0.33
PCOLCE-202ENST00000460002 HMGCS2P54868 508 aa17.12■□□□□ 0.33
PCOLCE-202ENST00000460002 TFF2Q03403 129 aa17.12■□□□□ 0.33
PCOLCE-202ENST00000460002 PABPC4Q13310 644 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCOLCE-202ENST00000460002 GJC2Q5T442 439 aaPredicted RBP17.12■□□□□ 0.33
PCOLCE-202ENST00000460002 USP40Q9NVE5 1235 aa17.12■□□□□ 0.33
PCOLCE-202ENST00000460002 DOCK2Q92608 1830 aa17.12■□□□□ 0.33
PCOLCE-202ENST00000460002 GPR37L1O60883 481 aa17.11■□□□□ 0.33
PCOLCE-202ENST00000460002 PBX2P40425 430 aa17.11■□□□□ 0.33
PCOLCE-202ENST00000460002 LINS1Q8NG48 757 aa17.11■□□□□ 0.33
PCOLCE-202ENST00000460002 KHSRPQ92945 711 aaKnown RBP eCLIP17.11■□□□□ 0.33
PCOLCE-202ENST00000460002 PORCNQ9H237 461 aa17.11■□□□□ 0.33
PCOLCE-202ENST00000460002 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
PCOLCE-202ENST00000460002 FLRT1Q9NZU1 646 aa17.11■□□□□ 0.33
PCOLCE-202ENST00000460002 MSCO60682 206 aa17.1■□□□□ 0.33
PCOLCE-202ENST00000460002 IGFBP4P22692 258 aa17.1■□□□□ 0.33
PCOLCE-202ENST00000460002 CNGA1P29973 690 aa17.1■□□□□ 0.33
PCOLCE-202ENST00000460002 MAPK4P31152 587 aa17.1■□□□□ 0.33
PCOLCE-202ENST00000460002 RGS3P49796 1198 aa17.1■□□□□ 0.33
PCOLCE-202ENST00000460002 CAVIN4Q5BKX8 364 aa17.1■□□□□ 0.33
PCOLCE-202ENST00000460002 GPR142Q7Z601 462 aa17.1■□□□□ 0.33
PCOLCE-202ENST00000460002 GPRC5AQ8NFJ5 357 aa17.1■□□□□ 0.33
PCOLCE-202ENST00000460002 RUNDC1Q96C34 613 aa17.1■□□□□ 0.33
PCOLCE-202ENST00000460002 DDTLA6NHG4 134 aaPredicted RBP17.09■□□□□ 0.33
PCOLCE-202ENST00000460002 Q3C1V9 767 aa17.09■□□□□ 0.33
PCOLCE-202ENST00000460002 ZNF280CQ8ND82 737 aa17.09■□□□□ 0.33
PCOLCE-202ENST00000460002 CHMP4AQ9BY43 222 aa17.09■□□□□ 0.33
PCOLCE-202ENST00000460002 PBX4Q9BYU1 374 aa17.09■□□□□ 0.33
PCOLCE-202ENST00000460002 UTYO14607 1347 aa17.08■□□□□ 0.32
PCOLCE-202ENST00000460002 GNAI1P63096 354 aa17.08■□□□□ 0.32
PCOLCE-202ENST00000460002 TLE2Q04725 743 aa17.08■□□□□ 0.32
PCOLCE-202ENST00000460002 MFSD14CQ5VZR4 134 aa17.08■□□□□ 0.32
PCOLCE-202ENST00000460002 ZSCAN29Q8IWY8 852 aaPredicted RBP17.08■□□□□ 0.32
PCOLCE-202ENST00000460002 TRPV1Q8NER1 839 aa17.08■□□□□ 0.32
PCOLCE-202ENST00000460002 DNAAF4Q8WXU2 420 aa17.08■□□□□ 0.32
PCOLCE-202ENST00000460002 STK31Q9BXU1 1019 aa17.08■□□□□ 0.32
PCOLCE-202ENST00000460002 RBPJLQ9UBG7 517 aa17.08■□□□□ 0.32
PCOLCE-202ENST00000460002 CACNA1AO00555 2505 aa17.08■□□□□ 0.32
PCOLCE-202ENST00000460002 RFX7Q2KHR2 1363 aa17.07■□□□□ 0.32
PCOLCE-202ENST00000460002 GRXCR1A8MXD5 290 aa17.07■□□□□ 0.32
PCOLCE-202ENST00000460002 ENTPD3O75355 529 aa17.07■□□□□ 0.32
PCOLCE-202ENST00000460002 IRX3P78415 501 aaPredicted RBP17.07■□□□□ 0.32
PCOLCE-202ENST00000460002 MAP2K5Q13163 448 aa17.07■□□□□ 0.32
PCOLCE-202ENST00000460002 SH3D19Q5HYK7 790 aa17.07■□□□□ 0.32
PCOLCE-202ENST00000460002 PLEKHH3Q7Z736 793 aa17.07■□□□□ 0.32
PCOLCE-202ENST00000460002 IDI2Q9BXS1 227 aa17.07■□□□□ 0.32
PCOLCE-202ENST00000460002 CHD9Q3L8U1 2897 aa17.06■□□□□ 0.32
PCOLCE-202ENST00000460002 KBTBD13C9JR72 458 aa17.06■□□□□ 0.32
PCOLCE-202ENST00000460002 PRDX5P30044 214 aa17.06■□□□□ 0.32
PCOLCE-202ENST00000460002 HERVK_113P62684 666 aa17.06■□□□□ 0.32
PCOLCE-202ENST00000460002 FPGSQ05932 587 aa17.06■□□□□ 0.32
PCOLCE-202ENST00000460002 C1orf53Q5VUE5 145 aa17.06■□□□□ 0.32
PCOLCE-202ENST00000460002 ARRDC4Q8NCT1 418 aa17.06■□□□□ 0.32
PCOLCE-202ENST00000460002 EDC3Q96F86 508 aaKnown RBP17.06■□□□□ 0.32
PCOLCE-202ENST00000460002 TSPYL2Q9H2G4 693 aaPredicted RBP17.06■□□□□ 0.32
PCOLCE-202ENST00000460002 TACC3Q9Y6A5 838 aa17.06■□□□□ 0.32
PCOLCE-202ENST00000460002 MROH5Q6ZUA9 1318 aa17.05■□□□□ 0.32
PCOLCE-202ENST00000460002 FAM196BA6NMK8 535 aa17.05■□□□□ 0.32
PCOLCE-202ENST00000460002 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
PCOLCE-202ENST00000460002 ADCYAP1R1P41586 468 aa17.05■□□□□ 0.32
PCOLCE-202ENST00000460002 ERVK-9P63128 1117 aa17.05■□□□□ 0.32
PCOLCE-202ENST00000460002 ERVK-24P63145 666 aa17.05■□□□□ 0.32
PCOLCE-202ENST00000460002 FERMT2Q96AC1 680 aa17.05■□□□□ 0.32
PCOLCE-202ENST00000460002 KIAA0355O15063 1070 aa17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 CLTBP09497 229 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms