RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 STAMBPO95630 424 aa13.15□□□□□ -0.3
SMARCAD1-204ENST00000457823 KRT9P35527 623 aa13.15□□□□□ -0.3
SMARCAD1-204ENST00000457823 DYMQ7RTS9 669 aa13.15□□□□□ -0.3
SMARCAD1-204ENST00000457823 KIF24Q5T7B8 1368 aa13.15□□□□□ -0.3
SMARCAD1-204ENST00000457823 SPATA31E1Q6ZUB1 1445 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 IGSF3O75054 1194 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 PPP2R3AQ06190 1150 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 RAD51AP2Q09MP3 1159 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 PAK1Q13153 545 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 HAUS3Q68CZ6 603 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 ARHGEF10LQ9HCE6 1279 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 CCDC169A6NNP5 214 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 HSPD1P10809 573 aaKnown RBP13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 EPB41P11171 864 aaKnown RBP13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 GYG1P46976 350 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 KRT25Q7Z3Z0 450 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 ZNF654Q8IZM8 581 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 CMTR1Q8N1G2 835 aaKnown RBP13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 CCDC25Q86WR0 208 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 CEP83Q9Y592 693 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 SMIM23A6NLE4 172 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 PDE6AP16499 860 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 NLRP12P59046 1061 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 POSTNQ15063 836 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 LARGE2Q8N3Y3 721 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 TPCN1Q9ULQ1 816 aa13.14□□□□□ -0.31
SMARCAD1-204ENST00000457823 SYNRGQ9UMZ2 1314 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 FGAP02671 866 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 TUBBP07437 444 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 PKP1Q13835 747 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 FNBP1Q96RU3 617 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 GLT8D2Q9H1C3 349 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 ZEB2O60315 1214 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 BCAMP50895 628 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 PPARAQ07869 468 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 PROSER3Q2NL68 480 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 MAEAQ7L5Y9 396 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 GPIHBP1Q8IV16 184 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 TRMT44Q8IYL2 757 aaKnown RBP13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 FBF1Q8TES7 1133 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 TSNARE1Q96NA8 513 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 USP28Q96RU2 1077 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 TAB2Q9NYJ8 693 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 MAST3O60307 1309 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 ADCY7P51828 1080 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 TNNC1P63316 161 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 NCAPH2Q6IBW4 605 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 ZNF354CQ86Y25 554 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 TTC16Q8NEE8 873 aa13.13□□□□□ -0.31
SMARCAD1-204ENST00000457823 GTF2IP78347 998 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 IFNL3Q8IZI9 196 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 ZBTB38Q8NAP3 1195 aaPredicted RBP13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 SDR42E1Q8WUS8 393 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 ARHGEF35A5YM69 484 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 H0YIN7 160 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.317e-7■□□□□ 9.2
SMARCAD1-204ENST00000457823 MFSD14BQ5SR56 506 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 TBC1D7Q9P0N9 293 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 VPS18Q9P253 973 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 CFBP00751 764 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 USH1GQ495M9 461 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 REXO1Q8N1G1 1221 aaKnown RBP13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 FNBP4Q8N3X1 1017 aaPredicted RBP13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 HAUS7Q99871 368 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 SMTNP53814 917 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 ADALQ6DHV7 355 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 TBC1D22AQ8WUA7 517 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 KDRP35968 1356 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 MAGI2Q86UL8 1455 aa13.12□□□□□ -0.31
SMARCAD1-204ENST00000457823 KIF4AO95239 1232 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 PCCAP05165 728 aaPredicted RBP13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 MYCLP12524 364 aaPredicted RBP13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 TNFAIP3P21580 790 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 CFAP58Q5T655 872 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 ERO1AQ96HE7 468 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 BLZF1Q9H2G9 400 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 COPRSQ9NQ92 184 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 SERTAD1Q9UHV2 236 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 MTMR6Q9Y217 621 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 CALCOCO2Q13137 446 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 TRIM14Q14142 442 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 CYP26C1Q6V0L0 522 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 UNC5CLQ8IV45 518 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 CARD6Q9BX69 1037 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 PICK1Q9NRD5 415 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 MTUS1Q9ULD2 1270 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 DNM3Q9UQ16 869 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 KRT5P13647 590 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 FANCBQ8NB91 859 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms