RNA–Protein interactions for RNA: ENST00000456986.5

NEDD4L-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 8,436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-209ENST00000456986 CPLX4Q7Z7G2 160 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 USHBP1Q8N6Y0 703 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 LMBRD1Q9NUN5 540 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 ATP11AP98196 1134 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 SEL1L2Q5TEA6 688 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 HEATR3Q7Z4Q2 680 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 GTF3C6Q969F1 213 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 EPSTI1Q96J88 318 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 CACYBPQ9HB71 228 aaKnown RBP9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 MRVI1Q9Y6F6 885 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 MED14O60244 1454 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 DKC1O60832 514 aaKnown RBP eCLIP9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 ZNF202O95125 648 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 BRD1O95696 1058 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 ERCC5P28715 1186 aaPredicted RBP9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 ZNF569Q5MCW4 686 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 IGSF22Q8N9C0 903 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 SH2D4AQ9H788 454 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 VPS18Q9P253 973 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 USP32Q8NFA0 1604 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 MARCKSP29966 332 aaPredicted RBP9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 MAP7Q14244 749 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 CCDC144CPQ8IYA2 1237 aa9.5□□□□□ -0.89
NEDD4L-209ENST00000456986 RASSF2P50749 326 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 SH2D4BQ5SQS7 431 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 ADALQ6DHV7 355 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 GBP6Q6ZN66 633 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 MAIP1Q8WWC4 291 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 TSPYL2Q9H2G4 693 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 ANKRD26Q9UPS8 1709 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 MAST3O60307 1309 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 KDM3AQ9Y4C1 1321 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 TRIM37O94972 964 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 TSHZ3Q63HK5 1081 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 LMBR1LQ6UX01 489 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 TRMT2AQ8IZ69 625 aaKnown RBP9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 CCDC82Q8N4S0 544 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 ZBTB3Q9H5J0 574 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 MYH8P13535 1937 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 NBPF6Q5VWK0 638 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 NBPF5PQ86XG9 351 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 ARHGAP24Q8N264 748 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 DACT3Q96B18 629 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 NBPF4Q96M43 638 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 RNMTO43148 476 aaKnown RBP9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 IL2RBP14784 551 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 SLC9C1Q4G0N8 1177 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 CFAP221Q4G0U5 840 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 CCDC85AQ96PX6 553 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 NUF2Q9BZD4 464 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 SYNCQ9H7C4 482 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 ABCA6Q8N139 1617 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 MACROD2A1Z1Q3 448 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 FAM13AO94988 1023 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 PAK1Q13153 545 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 POSTNQ15063 836 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 MTHFSDQ2M296 383 aaKnown RBP9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 FBXO31Q5XUX0 539 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 ATRIPQ8WXE1 791 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 MRFAP1L1Q96HT8 127 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 OSBPL3Q9H4L5 887 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 RSPH14Q9UHP6 348 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 DHX58Q96C10 678 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 RAB17Q9H0T7 212 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 A2ML1A8K2U0 1454 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 PTCH1Q13635 1447 aa9.49□□□□□ -0.89
NEDD4L-209ENST00000456986 FLOT1O75955 427 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 PAK2Q13177 524 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 NCAPD2Q15021 1401 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 TNNI3KQ59H18 835 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 FPGT-TNNI3KV9GXZ4 949 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 EFCAB8A8MWE9 144 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 PDE1CQ14123 709 aaPredicted RBP9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 RUNDC3BQ96NL0 473 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 GUCA1BQ9UMX6 200 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 TBX22Q9Y458 520 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 CPSF1Q10570 1443 aaKnown RBP9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 GOLGA6CA6NDK9 693 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 ATP5J2-PTCD1G3V325 749 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 GOLGA6DP0CG33 693 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 APBA1Q02410 837 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 MAGEB6Q8N7X4 407 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 TRIM58Q8NG06 486 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 GOLGA6AQ9NYA3 693 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 NKIRAS1Q9NYS0 192 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 WHAMMP3Q1A5X7 153 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 MMRN2Q9H8L6 949 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 ERVK-7P63135 1459 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 MYL1P05976 194 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 ATP5JP18859 108 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 NCBP1Q09161 790 aaKnown RBP9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 C8orf74Q6P047 294 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 BICD1Q96G01 975 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 SAMM50Q9Y512 469 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 PARP1P09874 1014 aaKnown RBP9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 RFC4P35249 363 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 APOBRQ0VD83 1088 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 SYT10Q6XYQ8 523 aa9.48□□□□□ -0.89
NEDD4L-209ENST00000456986 CCDC114Q96M63 670 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms