RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 THSD7AQ9UPZ6 1657 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 CYP2D7A0A087X1C5 515 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 SLFN14P0C7P3 912 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 CDC25BP30305 580 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 TM4SF1P30408 202 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 NFIXQ14938 502 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 TPTE2Q6XPS3 522 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 MICU3Q86XE3 530 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 ZNF396Q96N95 335 aaPredicted RBP14.35□□□□□ -0.11
LINC00959-201ENST00000456581 ZSWIM5Q9P217 1185 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 LAMB2P55268 1798 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 TDO2P48775 406 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 TRAPPC3LQ5T215 181 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 E4F1Q66K89 784 aaPredicted RBP14.35□□□□□ -0.11
LINC00959-201ENST00000456581 C8orf76Q96K31 380 aa14.35□□□□□ -0.11
LINC00959-201ENST00000456581 CGNQ9P2M7 1197 aaKnown RBP14.35□□□□□ -0.11
LINC00959-201ENST00000456581 ORC3Q9UBD5 711 aaPredicted RBP14.35□□□□□ -0.11
LINC00959-201ENST00000456581 ZNF804BA4D1E1 1349 aa14.34□□□□□ -0.11
LINC00959-201ENST00000456581 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.34□□□□□ -0.11
LINC00959-201ENST00000456581 WDHD1O75717 1129 aaPredicted RBP14.34□□□□□ -0.11
LINC00959-201ENST00000456581 EVCP57679 992 aa14.34□□□□□ -0.11
LINC00959-201ENST00000456581 PAXBP1Q9Y5B6 917 aa14.34□□□□□ -0.11
LINC00959-201ENST00000456581 ERICH4A6NGS2 130 aa14.34□□□□□ -0.11
LINC00959-201ENST00000456581 CDC27P30260 824 aa14.34□□□□□ -0.11
LINC00959-201ENST00000456581 UBE4AQ14139 1066 aa14.34□□□□□ -0.11
LINC00959-201ENST00000456581 SYT10Q6XYQ8 523 aa14.34□□□□□ -0.11
LINC00959-201ENST00000456581 PHKBQ93100 1093 aa14.34□□□□□ -0.11
LINC00959-201ENST00000456581 QTRT2Q9H974 415 aaKnown RBP14.34□□□□□ -0.11
LINC00959-201ENST00000456581 OGFRQ9NZT2 677 aa14.34□□□□□ -0.11
LINC00959-201ENST00000456581 DOCK2Q92608 1830 aa14.34□□□□□ -0.11
LINC00959-201ENST00000456581 MINDY4BA8MYZ0 360 aa14.33□□□□□ -0.11
LINC00959-201ENST00000456581 SPECC1Q5M775 1068 aa14.33□□□□□ -0.11
LINC00959-201ENST00000456581 DPF2Q92785 391 aa14.33□□□□□ -0.11
LINC00959-201ENST00000456581 GTPBP4Q9BZE4 634 aaKnown RBP14.33□□□□□ -0.11
LINC00959-201ENST00000456581 KIAA1468Q9P260 1216 aa14.33□□□□□ -0.11
LINC00959-201ENST00000456581 ANGEL1Q9UNK9 670 aaKnown RBP14.33□□□□□ -0.11
LINC00959-201ENST00000456581 SCN7AQ01118 1682 aa14.33□□□□□ -0.11
LINC00959-201ENST00000456581 SH2B2O14492 632 aaPredicted RBP14.33□□□□□ -0.12
LINC00959-201ENST00000456581 CPLX1O14810 134 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 CTAGE5O15320 804 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 TRIM37O94972 964 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 SLC4A8Q2Y0W8 1093 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 CAVIN4Q5BKX8 364 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 IGDCC4Q8TDY8 1250 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 NYXQ9GZU5 481 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 PODXL2Q9NZ53 605 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 SBF2Q86WG5 1849 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 NHSQ6T4R5 1651 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 ADALQ6DHV7 355 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 CLIC6Q96NY7 704 aa14.33□□□□□ -0.12
LINC00959-201ENST00000456581 TAF1LQ8IZX4 1826 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 SPTLC2O15270 562 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 ZNF202O95125 648 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 PFKFB1P16118 471 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 PRDX5P30044 214 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 MYSM1Q5VVJ2 828 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 APOA5Q6Q788 366 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 FBXL16Q8N461 479 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 CCDC82Q8N4S0 544 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 RTEL1Q9NZ71 1219 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 RGS17Q9UGC6 210 aaPredicted RBP14.32□□□□□ -0.12
LINC00959-201ENST00000456581 BAZ2AQ9UIF9 1905 aaKnown RBP14.32□□□□□ -0.12
LINC00959-201ENST00000456581 BAZ2BQ9UIF8 2168 aaKnown RBP14.32□□□□□ -0.12
LINC00959-201ENST00000456581 ONECUT3O60422 494 aaPredicted RBP14.32□□□□□ -0.12
LINC00959-201ENST00000456581 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
LINC00959-201ENST00000456581 TMEM67Q5HYA8 995 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 NFXL1Q6ZNB6 911 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 FAM177A1Q8N128 213 aaPredicted RBP14.32□□□□□ -0.12
LINC00959-201ENST00000456581 CMTR1Q8N1G2 835 aaKnown RBP14.32□□□□□ -0.12
LINC00959-201ENST00000456581 PPP1R13BQ96KQ4 1090 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 TRERF1Q96PN7 1200 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 LY9Q9HBG7 655 aa14.32□□□□□ -0.12
LINC00959-201ENST00000456581 TRPC5Q9UL62 973 aaPredicted RBP14.32□□□□□ -0.12
LINC00959-201ENST00000456581 ZNF831Q5JPB2 1677 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 PRDM1O75626 825 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 ALX1Q15699 326 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 AKNAD1Q5T1N1 836 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 GNL3LQ9NVN8 582 aaKnown RBP14.31□□□□□ -0.12
LINC00959-201ENST00000456581 A0A1B0GUL6 1792 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 IFIT3O14879 490 aaKnown RBP14.31□□□□□ -0.12
LINC00959-201ENST00000456581 SLC3A2P08195 630 aaKnown RBP14.31□□□□□ -0.12
LINC00959-201ENST00000456581 PNOCQ13519 176 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 NCAPHQ15003 741 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 ZRSR1Q15695 479 aaKnown RBP14.31□□□□□ -0.12
LINC00959-201ENST00000456581 MFSD6Q6ZSS7 791 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 FBXO33Q7Z6M2 555 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 FBXO18Q8NFZ0 1043 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 HSD3B7Q9H2F3 369 aa14.31□□□□□ -0.12
LINC00959-201ENST00000456581 MAGEB6P1A0A0J9YX57 407 aa14.3□□□□□ -0.12
LINC00959-201ENST00000456581 FOXN1O15353 648 aa14.3□□□□□ -0.12
LINC00959-201ENST00000456581 METAP2P50579 478 aaKnown RBP eCLIP14.3□□□□□ -0.12
LINC00959-201ENST00000456581 AXDND1Q5T1B0 1012 aaPredicted RBP14.3□□□□□ -0.12
LINC00959-201ENST00000456581 RIOK1Q9BRS2 568 aaKnown RBP14.3□□□□□ -0.12
LINC00959-201ENST00000456581 FAM217BQ9NTX9 383 aaPredicted RBP14.3□□□□□ -0.12
LINC00959-201ENST00000456581 TNRC6CQ9HCJ0 1690 aaKnown RBP14.3□□□□□ -0.12
LINC00959-201ENST00000456581 TMEM232C9JQI7 657 aa14.3□□□□□ -0.12
LINC00959-201ENST00000456581 CAVIN2O95810 425 aa14.3□□□□□ -0.12
LINC00959-201ENST00000456581 ANKIB1Q9P2G1 1089 aa14.3□□□□□ -0.12
LINC00959-201ENST00000456581 C4BP0C0L5 1744 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms