RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 LCORLQ8N3X6 602 aa13.7□□□□□ -0.22
HDAC9-217ENST00000455069 GPATCH3Q96I76 525 aa13.7□□□□□ -0.22
HDAC9-217ENST00000455069 DNAJC18Q9H819 358 aa13.7□□□□□ -0.22
HDAC9-217ENST00000455069 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-217ENST00000455069 MAGEB6P1A0A0J9YX57 407 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 MANSC4A6NHS7 340 aaPredicted RBP13.69□□□□□ -0.22
HDAC9-217ENST00000455069 IGF2BP3O00425 579 aaKnown RBP eCLIP13.69□□□□□ -0.22
HDAC9-217ENST00000455069 TBC1D12O60347 775 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 TRPA1O75762 1119 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 RGS19P49795 217 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 DGKZQ13574 1117 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 SLC4A8Q2Y0W8 1093 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 ERO1BQ86YB8 467 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
HDAC9-217ENST00000455069 KBTBD3Q8NAB2 608 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 PTPN18Q99952 460 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 LNPKQ9C0E8 428 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 RWDD1Q9H446 243 aaPredicted RBP13.69□□□□□ -0.22
HDAC9-217ENST00000455069 SAP30BPQ9UHR5 308 aaKnown RBP13.69□□□□□ -0.22
HDAC9-217ENST00000455069 PALD1Q9ULE6 856 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 PDE4DIPQ5VU43 2346 aa13.69□□□□□ -0.22
HDAC9-217ENST00000455069 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
HDAC9-217ENST00000455069 IRF6O14896 467 aa13.68□□□□□ -0.22
HDAC9-217ENST00000455069 EVX2Q03828 476 aa13.68□□□□□ -0.22
HDAC9-217ENST00000455069 SREBF2Q12772 1141 aa13.68□□□□□ -0.22
HDAC9-217ENST00000455069 B4GALNT3Q6L9W6 998 aa13.68□□□□□ -0.22
HDAC9-217ENST00000455069 METTL16Q86W50 562 aaKnown RBP13.68□□□□□ -0.22
HDAC9-217ENST00000455069 CERS3Q8IU89 383 aa13.68□□□□□ -0.22
HDAC9-217ENST00000455069 SCYL3Q8IZE3 742 aa13.68□□□□□ -0.22
HDAC9-217ENST00000455069 BRI3BPQ8WY22 251 aa13.68□□□□□ -0.22
HDAC9-217ENST00000455069 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.22
HDAC9-217ENST00000455069 DHX36Q9H2U1 1008 aaKnown RBP13.68□□□□□ -0.22
HDAC9-217ENST00000455069 ARMT1Q9H993 441 aa13.68□□□□□ -0.22
HDAC9-217ENST00000455069 STAP2Q9UGK3 403 aa13.68□□□□□ -0.22
HDAC9-217ENST00000455069 LOC285556D6RIA3 1793 aa13.68□□□□□ -0.22
HDAC9-217ENST00000455069 ERC2O15083 957 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 GLRX3O76003 335 aaKnown RBP13.67□□□□□ -0.22
HDAC9-217ENST00000455069 MBD4O95243 580 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 USP5P45974 858 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 PDE1AP54750 535 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 NUCB1Q02818 461 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 PPIL2Q13356 520 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 UBE3CQ15386 1083 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 CCDC84Q86UT8 332 aaPredicted RBP13.67□□□□□ -0.22
HDAC9-217ENST00000455069 IFNL1Q8IU54 200 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 SDR42E1Q8WUS8 393 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 PUS7LQ9H0K6 701 aaKnown RBP13.67□□□□□ -0.22
HDAC9-217ENST00000455069 R3HDMLQ9H3Y0 253 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDAC9-217ENST00000455069 PI4KBQ9UBF8 816 aa13.67□□□□□ -0.22
HDAC9-217ENST00000455069 PRKAB2O43741 272 aa13.66□□□□□ -0.22
HDAC9-217ENST00000455069 JAG1P78504 1218 aa13.66□□□□□ -0.22
HDAC9-217ENST00000455069 PPATQ06203 517 aa13.66□□□□□ -0.22
HDAC9-217ENST00000455069 SHROOM1Q2M3G4 852 aaPredicted RBP13.66□□□□□ -0.22
HDAC9-217ENST00000455069 CHD1LQ86WJ1 897 aa13.66□□□□□ -0.22
HDAC9-217ENST00000455069 CRNKL1Q9BZJ0 848 aaKnown RBP13.66□□□□□ -0.22
HDAC9-217ENST00000455069 HERC5Q9UII4 1024 aaKnown RBP13.66□□□□□ -0.22
HDAC9-217ENST00000455069 KCNH4Q9UQ05 1017 aa13.66□□□□□ -0.22
HDAC9-217ENST00000455069 ZSWIM8A7E2V4 1837 aa13.65□□□□□ -0.22
HDAC9-217ENST00000455069 CTNND1O60716 968 aaKnown RBP13.65□□□□□ -0.22
HDAC9-217ENST00000455069 TBC1D8O95759 1140 aa13.65□□□□□ -0.22
HDAC9-217ENST00000455069 PTPRAP18433 802 aa13.65□□□□□ -0.22
HDAC9-217ENST00000455069 PLCD1P51178 756 aa13.65□□□□□ -0.22
HDAC9-217ENST00000455069 GTF2A2P52657 109 aa13.65□□□□□ -0.22
HDAC9-217ENST00000455069 INHBEP58166 350 aa13.65□□□□□ -0.22
HDAC9-217ENST00000455069 MOGSQ13724 837 aa13.65□□□□□ -0.22
HDAC9-217ENST00000455069 FAM43AQ8N2R8 423 aa13.65□□□□□ -0.22
HDAC9-217ENST00000455069 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
HDAC9-217ENST00000455069 CFHR5Q9BXR6 569 aa13.65□□□□□ -0.22
HDAC9-217ENST00000455069 DCP1AQ9NPI6 582 aaPredicted RBP13.65□□□□□ -0.22
HDAC9-217ENST00000455069 CCL15-CCL14A0A0B4J2E2 113 aa13.64□□□□□ -0.23
HDAC9-217ENST00000455069 SMIM22K7EJ46 135 aa13.64□□□□□ -0.23
HDAC9-217ENST00000455069 CYP2D6P10635 497 aa13.64□□□□□ -0.23
HDAC9-217ENST00000455069 CAP2P40123 477 aa13.64□□□□□ -0.23
HDAC9-217ENST00000455069 MLLT1Q03111 559 aaPredicted RBP13.64□□□□□ -0.23
HDAC9-217ENST00000455069 CCL15Q16663 113 aa13.64□□□□□ -0.23
HDAC9-217ENST00000455069 PLEKHM2Q8IWE5 1019 aa13.64□□□□□ -0.23
HDAC9-217ENST00000455069 APPBP2Q92624 585 aa13.64□□□□□ -0.23
HDAC9-217ENST00000455069 ZBTB47Q9UFB7 747 aaPredicted RBP13.64□□□□□ -0.23
HDAC9-217ENST00000455069 M0R2C6 588 aa13.63□□□□□ -0.23
HDAC9-217ENST00000455069 RNF113AO15541 343 aaKnown RBP13.63□□□□□ -0.23
HDAC9-217ENST00000455069 HLA-DOAP06340 250 aa13.63□□□□□ -0.23
HDAC9-217ENST00000455069 GABPAQ06546 454 aa13.63□□□□□ -0.23
HDAC9-217ENST00000455069 SNAPC2Q13487 334 aa13.63□□□□□ -0.23
HDAC9-217ENST00000455069 ZSCAN25Q6NSZ9 544 aa13.63□□□□□ -0.23
HDAC9-217ENST00000455069 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
HDAC9-217ENST00000455069 FOXP4Q8IVH2 680 aaPredicted RBP13.63□□□□□ -0.23
HDAC9-217ENST00000455069 SEC62Q99442 399 aaKnown RBP13.63□□□□□ -0.23
HDAC9-217ENST00000455069 EHD4Q9H223 541 aa13.63□□□□□ -0.23
HDAC9-217ENST00000455069 PICK1Q9NRD5 415 aa13.63□□□□□ -0.23
HDAC9-217ENST00000455069 AFG3L2Q9Y4W6 797 aa13.63□□□□□ -0.23
HDAC9-217ENST00000455069 ZHX2Q9Y6X8 837 aa13.63□□□□□ -0.23
HDAC9-217ENST00000455069 BTBD19C9JJ37 291 aa13.62□□□□□ -0.23
HDAC9-217ENST00000455069 GDF11O95390 407 aa13.62□□□□□ -0.23
HDAC9-217ENST00000455069 ALDH1A1P00352 501 aa13.62□□□□□ -0.23
HDAC9-217ENST00000455069 CETPP11597 493 aa13.62□□□□□ -0.23
HDAC9-217ENST00000455069 PDE4AP27815 886 aa13.62□□□□□ -0.23
HDAC9-217ENST00000455069 CRHR2Q13324 411 aa13.62□□□□□ -0.23
HDAC9-217ENST00000455069 CTU1Q7Z7A3 348 aaKnown RBP13.62□□□□□ -0.23
HDAC9-217ENST00000455069 CRACR2BQ8N4Y2 399 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms