RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLCN4-204ENST00000454850 MTMR10Q9NXD2 777 aa12.32□□□□□ -0.44
CLCN4-204ENST00000454850 STXBP5LQ9Y2K9 1186 aa12.32□□□□□ -0.44
CLCN4-204ENST00000454850 PTPRCP08575 1304 aa12.32□□□□□ -0.44
CLCN4-204ENST00000454850 RPTORQ8N122 1335 aa12.32□□□□□ -0.44
CLCN4-204ENST00000454850 SEMA3EO15041 775 aa12.31□□□□□ -0.44
CLCN4-204ENST00000454850 MAP3K10Q02779 954 aa12.31□□□□□ -0.44
CLCN4-204ENST00000454850 RASGRF1Q13972 1273 aa12.31□□□□□ -0.44
CLCN4-204ENST00000454850 LRIT3Q3SXY7 679 aa12.31□□□□□ -0.44
CLCN4-204ENST00000454850 CCDC102BQ68D86 513 aa12.31□□□□□ -0.44
CLCN4-204ENST00000454850 TRIB2Q92519 343 aa12.31□□□□□ -0.44
CLCN4-204ENST00000454850 SIPA1L1O43166 1804 aa12.31□□□□□ -0.44
CLCN4-204ENST00000454850 MROH7-TTC4A0A0A0MT08 1334 aa12.31□□□□□ -0.44
CLCN4-204ENST00000454850 CYP2B6P20813 491 aa12.3□□□□□ -0.44
CLCN4-204ENST00000454850 GCLCP48506 637 aaPredicted RBP12.3□□□□□ -0.44
CLCN4-204ENST00000454850 PABPC4Q13310 644 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLCN4-204ENST00000454850 SLF2Q8IX21 1173 aa12.3□□□□□ -0.44
CLCN4-204ENST00000454850 ZNF280CQ8ND82 737 aa12.3□□□□□ -0.44
CLCN4-204ENST00000454850 ASCC2Q9H1I8 757 aaPredicted RBP12.3□□□□□ -0.44
CLCN4-204ENST00000454850 GJD2Q9UKL4 321 aa12.3□□□□□ -0.44
CLCN4-204ENST00000454850 PA2G4Q9UQ80 394 aaKnown RBP12.3□□□□□ -0.44
CLCN4-204ENST00000454850 PFASO15067 1338 aa12.3□□□□□ -0.44
CLCN4-204ENST00000454850 MAST2Q6P0Q8 1798 aa12.3□□□□□ -0.44
CLCN4-204ENST00000454850 MYO5AQ9Y4I1 1855 aaKnown RBP12.29□□□□□ -0.44
CLCN4-204ENST00000454850 PEX10O60683 326 aa12.29□□□□□ -0.44
CLCN4-204ENST00000454850 CIAO1O76071 339 aa12.29□□□□□ -0.44
CLCN4-204ENST00000454850 UBTFL1P0CB47 393 aaPredicted RBP12.29□□□□□ -0.44
CLCN4-204ENST00000454850 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
CLCN4-204ENST00000454850 FAM9BQ8IZU0 186 aa12.29□□□□□ -0.44
CLCN4-204ENST00000454850 SSH1Q8WYL5 1049 aa12.29□□□□□ -0.44
CLCN4-204ENST00000454850 OGDHLQ9ULD0 1010 aa12.29□□□□□ -0.44
CLCN4-204ENST00000454850 FOCADQ5VW36 1801 aa12.29□□□□□ -0.44
CLCN4-204ENST00000454850 SPTBN5Q9NRC6 3674 aaKnown RBP12.29□□□□□ -0.44
CLCN4-204ENST00000454850 IL15P40933 162 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-204ENST00000454850 RHBDL3P58872 404 aa12.28□□□□□ -0.44
CLCN4-204ENST00000454850 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-204ENST00000454850 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-204ENST00000454850 MECOMQ03112 1051 aa12.28□□□□□ -0.44
CLCN4-204ENST00000454850 RRP1BQ14684 758 aaKnown RBP12.28□□□□□ -0.44
CLCN4-204ENST00000454850 SPTY2D1Q68D10 685 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-204ENST00000454850 FAM161BQ96MY7 647 aa12.28□□□□□ -0.44
CLCN4-204ENST00000454850 COL25A1Q9BXS0 654 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-204ENST00000454850 OSBPL5Q9H0X9 879 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-204ENST00000454850 USP17L5A8MUK1 530 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 TBC1D12O60347 775 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 CAP2P40123 477 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 TIMM10P62072 90 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 MTMR2Q13614 643 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 LRRC26Q2I0M4 334 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 ERICH6Q7L0X2 663 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.27□□□□□ -0.45
CLCN4-204ENST00000454850 ZNF384Q8TF68 577 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
CLCN4-204ENST00000454850 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 MYH1P12882 1939 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 TTC28Q96AY4 2481 aa12.27□□□□□ -0.45
CLCN4-204ENST00000454850 LTBP2Q14767 1821 aa12.26□□□□□ -0.45
CLCN4-204ENST00000454850 GPR75-ASB3A0A0A6YYF3 556 aa12.26□□□□□ -0.45
CLCN4-204ENST00000454850 ZKSCAN1P17029 563 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-204ENST00000454850 CCND3P30281 292 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-204ENST00000454850 CACNB2Q08289 660 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-204ENST00000454850 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
CLCN4-204ENST00000454850 MAP3K21Q5TCX8 1036 aa12.26□□□□□ -0.45
CLCN4-204ENST00000454850 PI16Q6UXB8 463 aa12.26□□□□□ -0.45
CLCN4-204ENST00000454850 NUDT12Q9BQG2 462 aa12.26□□□□□ -0.45
CLCN4-204ENST00000454850 AS3MTQ9HBK9 375 aa12.26□□□□□ -0.45
CLCN4-204ENST00000454850 MORF4L1Q9UBU8 362 aa12.26□□□□□ -0.45
CLCN4-204ENST00000454850 PDS5AQ29RF7 1337 aaKnown RBP12.26□□□□□ -0.45
CLCN4-204ENST00000454850 COL2A1P02458 1487 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-204ENST00000454850 CDH23Q9H251 3354 aa12.26□□□□□ -0.45
CLCN4-204ENST00000454850 ANP32CO43423 234 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 HERVK_113P62684 666 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 CCL14Q16627 93 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 TBC1D9Q6ZT07 1266 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 CCAR1Q8IX12 1150 aaKnown RBP12.25□□□□□ -0.45
CLCN4-204ENST00000454850 TEX11Q8IYF3 940 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 SOCS4Q8WXH5 440 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 XAGE2Q96GT9 111 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
CLCN4-204ENST00000454850 PAGR1Q9BTK6 254 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 TBC1D2Q9BYX2 928 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 TXNRD2Q9NNW7 524 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 SMC4Q9NTJ3 1288 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 TMOD4Q9NZQ9 345 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 RAI14Q9P0K7 980 aa12.25□□□□□ -0.45
CLCN4-204ENST00000454850 A0A1B0GUL7 405 aa12.24□□□□□ -0.45
CLCN4-204ENST00000454850 COL6A1P12109 1028 aa12.24□□□□□ -0.45
CLCN4-204ENST00000454850 GSTO1P78417 241 aa12.24□□□□□ -0.45
CLCN4-204ENST00000454850 TFCP2Q12800 502 aa12.24□□□□□ -0.45
CLCN4-204ENST00000454850 MVPQ14764 893 aaKnown RBP12.24□□□□□ -0.45
CLCN4-204ENST00000454850 SHROOM1Q2M3G4 852 aaPredicted RBP12.24□□□□□ -0.45
CLCN4-204ENST00000454850 GPRC5AQ8NFJ5 357 aa12.24□□□□□ -0.45
CLCN4-204ENST00000454850 NEUROD6Q96NK8 337 aa12.24□□□□□ -0.45
CLCN4-204ENST00000454850 GUCD1Q96NT3 240 aa12.24□□□□□ -0.45
CLCN4-204ENST00000454850 CWC22Q9HCG8 908 aaKnown RBP12.24□□□□□ -0.45
CLCN4-204ENST00000454850 RLFQ13129 1914 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
CLCN4-204ENST00000454850 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
CLCN4-204ENST00000454850 GDF11O95390 407 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms