RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 SMC4Q9NTJ3 1288 aa31.67■■■□□ 2.66
NEK6-211ENST00000454453 SPP2Q13103 211 aa31.66■■■□□ 2.66
NEK6-211ENST00000454453 NECAB2Q7Z6G3 386 aa31.66■■■□□ 2.66
NEK6-211ENST00000454453 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.66■■■□□ 2.667e-6■■□□□ 13.2
NEK6-211ENST00000454453 PNMA3Q9UL41 463 aa31.66■■■□□ 2.66
NEK6-211ENST00000454453 PLXNB2O15031 1838 aa31.65■■■□□ 2.66
NEK6-211ENST00000454453 XAGE2Q96GT9 111 aa31.65■■■□□ 2.66
NEK6-211ENST00000454453 OSBPL5Q9H0X9 879 aaPredicted RBP31.65■■■□□ 2.66
NEK6-211ENST00000454453 ATAD5Q96QE3 1844 aa31.65■■■□□ 2.66
NEK6-211ENST00000454453 A0A0C4DFX4 3053 aa31.64■■■□□ 2.66
NEK6-211ENST00000454453 A0A1B0GUL7 405 aa31.64■■■□□ 2.66
NEK6-211ENST00000454453 NPM3O75607 178 aaKnown RBP31.64■■■□□ 2.66
NEK6-211ENST00000454453 HMGCRP04035 888 aa31.64■■■□□ 2.66
NEK6-211ENST00000454453 HMGCS2P54868 508 aa31.64■■■□□ 2.66
NEK6-211ENST00000454453 SPTY2D1Q68D10 685 aaPredicted RBP31.64■■■□□ 2.66
NEK6-211ENST00000454453 C7orf61Q8IZ16 206 aa31.64■■■□□ 2.66
NEK6-211ENST00000454453 CDCA7LQ96GN5 454 aa31.64■■■□□ 2.66
NEK6-211ENST00000454453 ZNF280CQ8ND82 737 aa31.63■■■□□ 2.65
NEK6-211ENST00000454453 MEIS3Q99687 375 aa31.63■■■□□ 2.65
NEK6-211ENST00000454453 BMP8BP34820 402 aa31.62■■■□□ 2.65
NEK6-211ENST00000454453 TFCP2Q12800 502 aa31.62■■■□□ 2.65
NEK6-211ENST00000454453 PI16Q6UXB8 463 aa31.62■■■□□ 2.65
NEK6-211ENST00000454453 ERICH6Q7L0X2 663 aa31.62■■■□□ 2.65
NEK6-211ENST00000454453 ANKLE1Q8NAG6 615 aa31.62■■■□□ 2.65
NEK6-211ENST00000454453 ASCC2Q9H1I8 757 aaPredicted RBP31.62■■■□□ 2.65
NEK6-211ENST00000454453 ZMYND8Q9ULU4 1186 aaPredicted RBP31.62■■■□□ 2.65
NEK6-211ENST00000454453 NOB1Q9ULX3 412 aaKnown RBP31.62■■■□□ 2.65
NEK6-211ENST00000454453 DDX60LQ5H9U9 1706 aaKnown RBP31.61■■■□□ 2.65
NEK6-211ENST00000454453 COL2A1P02458 1487 aaPredicted RBP31.61■■■□□ 2.65
NEK6-211ENST00000454453 RPTORQ8N122 1335 aa31.61■■■□□ 2.65
NEK6-211ENST00000454453 GCLCP48506 637 aaPredicted RBP31.61■■■□□ 2.65
NEK6-211ENST00000454453 HMG20BQ9P0W2 317 aa31.61■■■□□ 2.65
NEK6-211ENST00000454453 CAP2P40123 477 aa31.6■■■□□ 2.65
NEK6-211ENST00000454453 SH3D19Q5HYK7 790 aa31.6■■■□□ 2.65
NEK6-211ENST00000454453 TBC1D9Q6ZT07 1266 aa31.6■■■□□ 2.65
NEK6-211ENST00000454453 NSUN4Q96CB9 384 aaKnown RBP31.6■■■□□ 2.65
NEK6-211ENST00000454453 SIPA1L1O43166 1804 aa31.59■■■□□ 2.65
NEK6-211ENST00000454453 TRIB2Q92519 343 aa31.59■■■□□ 2.65
NEK6-211ENST00000454453 PEX10O60683 326 aa31.58■■■□□ 2.65
NEK6-211ENST00000454453 HMX1Q9NP08 348 aaPredicted RBP31.58■■■□□ 2.65
NEK6-211ENST00000454453 SYN1P17600 705 aa31.57■■■□□ 2.64
NEK6-211ENST00000454453 MVPQ14764 893 aaKnown RBP31.57■■■□□ 2.64
NEK6-211ENST00000454453 TRMT2AQ8IZ69 625 aaKnown RBP31.57■■■□□ 2.64
NEK6-211ENST00000454453 MORF4L1Q9UBU8 362 aa31.57■■■□□ 2.64
NEK6-211ENST00000454453 USP17L5A8MUK1 530 aa31.56■■■□□ 2.64
NEK6-211ENST00000454453 JAG1P78504 1218 aa31.56■■■□□ 2.64
NEK6-211ENST00000454453 TBC1D2Q9BYX2 928 aa31.56■■■□□ 2.64
NEK6-211ENST00000454453 NBPF3Q9H094 633 aa31.56■■■□□ 2.64
NEK6-211ENST00000454453 OGDHLQ9ULD0 1010 aa31.56■■■□□ 2.64
NEK6-211ENST00000454453 AKAP2Q9Y2D5 859 aa31.56■■■□□ 2.64
NEK6-211ENST00000454453 PABPC4Q13310 644 aaKnown RBP eCLIP31.55■■■□□ 2.64
NEK6-211ENST00000454453 SPATA5Q8NB90 893 aa31.55■■■□□ 2.64
NEK6-211ENST00000454453 C11orf49Q9H6J7 331 aa31.55■■■□□ 2.64
NEK6-211ENST00000454453 PFASO15067 1338 aa31.54■■■□□ 2.64
NEK6-211ENST00000454453 MAP4K4O95819 1239 aaPredicted RBP31.54■■■□□ 2.64
NEK6-211ENST00000454453 MAP3K21Q5TCX8 1036 aa31.54■■■□□ 2.64
NEK6-211ENST00000454453 Q7L0L9 218 aa31.54■■■□□ 2.64
NEK6-211ENST00000454453 TXNRD2Q9NNW7 524 aa31.54■■■□□ 2.64
NEK6-211ENST00000454453 SRGAP3O43295 1099 aa31.53■■■□□ 2.64
NEK6-211ENST00000454453 MAGEA10P43363 369 aaPredicted RBP31.53■■■□□ 2.64
NEK6-211ENST00000454453 GPR153Q6NV75 609 aa31.53■■■□□ 2.64
NEK6-211ENST00000454453 NEUROD6Q96NK8 337 aa31.53■■■□□ 2.64
NEK6-211ENST00000454453 ZNF316A6NFI3 1004 aaPredicted RBP31.52■■■□□ 2.64
NEK6-211ENST00000454453 LDHCP07864 332 aa31.52■■■□□ 2.64
NEK6-211ENST00000454453 CYP2B6P20813 491 aa31.52■■■□□ 2.64
NEK6-211ENST00000454453 GSTO1P78417 241 aa31.52■■■□□ 2.64
NEK6-211ENST00000454453 MTX1Q13505 466 aa31.52■■■□□ 2.64
NEK6-211ENST00000454453 SHROOM1Q2M3G4 852 aaPredicted RBP31.52■■■□□ 2.64
NEK6-211ENST00000454453 SH3RF3Q8TEJ3 882 aaPredicted RBP31.52■■■□□ 2.64
NEK6-211ENST00000454453 API5Q9BZZ5 524 aaKnown RBP31.52■■■□□ 2.64
NEK6-211ENST00000454453 HDAC5Q9UQL6 1122 aa31.52■■■□□ 2.64
NEK6-211ENST00000454453 ARID4AP29374 1257 aaPredicted RBP31.51■■■□□ 2.63
NEK6-211ENST00000454453 MTMR2Q13614 643 aa31.51■■■□□ 2.63
NEK6-211ENST00000454453 LRIT3Q3SXY7 679 aa31.51■■■□□ 2.63
NEK6-211ENST00000454453 TEX11Q8IYF3 940 aa31.51■■■□□ 2.63
NEK6-211ENST00000454453 DEFB123Q8N688 67 aa31.51■■■□□ 2.63
NEK6-211ENST00000454453 P2RX7Q99572 595 aaKnown RBP31.51■■■□□ 2.63
NEK6-211ENST00000454453 WDR18Q9BV38 432 aa31.51■■■□□ 2.63
NEK6-211ENST00000454453 DNAJC18Q9H819 358 aa31.51■■■□□ 2.63
NEK6-211ENST00000454453 RAI14Q9P0K7 980 aa31.51■■■□□ 2.63
NEK6-211ENST00000454453 HERC5Q9UII4 1024 aaKnown RBP31.51■■■□□ 2.63
NEK6-211ENST00000454453 PRKAR2AP13861 404 aaKnown RBP31.5■■■□□ 2.63
NEK6-211ENST00000454453 MCAMP43121 646 aa31.5■■■□□ 2.63
NEK6-211ENST00000454453 AS3MTQ9HBK9 375 aa31.5■■■□□ 2.63
NEK6-211ENST00000454453 HOXA7P31268 230 aaPredicted RBP31.49■■■□□ 2.63
NEK6-211ENST00000454453 BACE1P56817 501 aa31.49■■■□□ 2.63
NEK6-211ENST00000454453 POTEEQ6S8J3 1075 aa31.49■■■□□ 2.63
NEK6-211ENST00000454453 TDHQ8IZJ6 230 aa31.48■■■□□ 2.63
NEK6-211ENST00000454453 COL6A1P12109 1028 aa31.47■■■□□ 2.63
NEK6-211ENST00000454453 IRX3P78415 501 aaPredicted RBP31.47■■■□□ 2.63
NEK6-211ENST00000454453 USP6NLQ92738 828 aa31.47■■■□□ 2.63
NEK6-211ENST00000454453 PI4KBQ9UBF8 816 aa31.47■■■□□ 2.63
NEK6-211ENST00000454453 RBPJLQ9UBG7 517 aa31.47■■■□□ 2.63
NEK6-211ENST00000454453 UNC80Q8N2C7 3258 aa31.46■■■□□ 2.63
NEK6-211ENST00000454453 HERVK_113P62684 666 aa31.46■■■□□ 2.63
NEK6-211ENST00000454453 Q3C1V9 767 aa31.46■■■□□ 2.63
NEK6-211ENST00000454453 NUDT12Q9BQG2 462 aa31.46■■■□□ 2.63
NEK6-211ENST00000454453 CDK5RAP2Q96SN8 1893 aa31.46■■■□□ 2.63
NEK6-211ENST00000454453 XRCC5P13010 732 aaKnown RBP31.45■■■□□ 2.63
NEK6-211ENST00000454453 CACNB2Q08289 660 aaPredicted RBP31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms