RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 TOMM22Q9NS69 142 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 PCDHB6Q9Y5E3 794 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 ZMYM6O95789 1325 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 GOLGA6L9A6NEM1 432 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 KIF5CO60282 957 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 IDH1O75874 414 aaKnown RBP22.37■■□□□ 1.17
LMBR1-213ENST00000454132 ZNF18P17022 549 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 TOB1P50616 345 aaPredicted RBP22.37■■□□□ 1.17
LMBR1-213ENST00000454132 RRP12Q5JTH9 1297 aaKnown RBP22.37■■□□□ 1.17
LMBR1-213ENST00000454132 NCAPH2Q6IBW4 605 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 PPFIBP1Q86W92 1011 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 PLBD2Q8NHP8 589 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 CHMP4CQ96CF2 233 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 TSPYL1Q9H0U9 437 aa22.37■■□□□ 1.17
LMBR1-213ENST00000454132 CWC25Q9NXE8 425 aaPredicted RBP22.37■■□□□ 1.17
LMBR1-213ENST00000454132 C5P01031 1676 aa22.36■■□□□ 1.17
LMBR1-213ENST00000454132 KDM6AO15550 1401 aaPredicted RBP22.36■■□□□ 1.17
LMBR1-213ENST00000454132 H7C1W4 665 aa22.36■■□□□ 1.17
LMBR1-213ENST00000454132 NOA1Q8NC60 698 aaKnown RBP22.36■■□□□ 1.17
LMBR1-213ENST00000454132 TFR2Q9UP52 801 aa22.36■■□□□ 1.17
LMBR1-213ENST00000454132 UBN2Q6ZU65 1347 aa22.36■■□□□ 1.17
LMBR1-213ENST00000454132 ZBTB43O43298 467 aa22.36■■□□□ 1.17
LMBR1-213ENST00000454132 CTDSPL2Q05D32 466 aa22.35■■□□□ 1.17
LMBR1-213ENST00000454132 NR1I3Q14994 352 aa22.35■■□□□ 1.17
LMBR1-213ENST00000454132 SYNE4Q8N205 404 aa22.35■■□□□ 1.17
LMBR1-213ENST00000454132 RABEP2Q9H5N1 569 aa22.35■■□□□ 1.17
LMBR1-213ENST00000454132 CDC23Q9UJX2 597 aa22.35■■□□□ 1.17
LMBR1-213ENST00000454132 HDXQ7Z353 690 aa22.35■■□□□ 1.17
LMBR1-213ENST00000454132 hCG_1642624A0A1W2PR95 340 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 ZMYND10O75800 440 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 CD44P16070 742 aaKnown RBP22.34■■□□□ 1.17
LMBR1-213ENST00000454132 BRD3Q15059 726 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 TAF7LQ5H9L4 462 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 APPBP2Q92624 585 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 ATG3Q9NT62 314 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 AFDNP55196 1824 aaKnown RBP22.34■■□□□ 1.17
LMBR1-213ENST00000454132 TMEM67Q5HYA8 995 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 DIS3L2Q8IYB7 885 aaKnown RBP22.34■■□□□ 1.17
LMBR1-213ENST00000454132 OXER1Q8TDS5 423 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 TRIM10Q9UDY6 481 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 NWD2Q9ULI1 1742 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 FAM205CA6NFA0 338 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 SH2B2O14492 632 aaPredicted RBP22.34■■□□□ 1.17
LMBR1-213ENST00000454132 FAM217BQ9NTX9 383 aaPredicted RBP22.34■■□□□ 1.17
LMBR1-213ENST00000454132 AKAP2Q9Y2D5 859 aa22.34■■□□□ 1.17
LMBR1-213ENST00000454132 FXR1P51114 621 aaKnown RBP eCLIP22.33■■□□□ 1.17
LMBR1-213ENST00000454132 CABP4P57796 275 aa22.33■■□□□ 1.17
LMBR1-213ENST00000454132 AKAP17AQ02040 695 aaKnown RBP22.33■■□□□ 1.17
LMBR1-213ENST00000454132 CCDC57Q2TAC2 916 aa22.33■■□□□ 1.17
LMBR1-213ENST00000454132 CPLX2Q6PUV4 134 aaKnown RBP22.33■■□□□ 1.17
LMBR1-213ENST00000454132 NUTM2AQ8IVF1 878 aaPredicted RBP22.33■■□□□ 1.17
LMBR1-213ENST00000454132 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.17
LMBR1-213ENST00000454132 RIN2Q8WYP3 895 aaPredicted RBP22.33■■□□□ 1.17
LMBR1-213ENST00000454132 LRRIQ3A6PVS8 624 aaPredicted RBP22.33■■□□□ 1.16
LMBR1-213ENST00000454132 ENC1O14682 589 aa22.33■■□□□ 1.16
LMBR1-213ENST00000454132 CASP8Q14790 479 aa22.33■■□□□ 1.16
LMBR1-213ENST00000454132 CHRNA2Q15822 529 aa22.33■■□□□ 1.16
LMBR1-213ENST00000454132 DDX17Q92841 729 aaKnown RBP22.33■■□□□ 1.16
LMBR1-213ENST00000454132 L1RE1Q9UN81 338 aa22.33■■□□□ 1.16
LMBR1-213ENST00000454132 RNF225M0QZC1 329 aaPredicted RBP22.32■■□□□ 1.16
LMBR1-213ENST00000454132 TATP17735 454 aaPredicted RBP22.32■■□□□ 1.16
LMBR1-213ENST00000454132 NOSTRINQ8IVI9 506 aa22.32■■□□□ 1.16
LMBR1-213ENST00000454132 ENOX1Q8TC92 643 aaKnown RBP22.32■■□□□ 1.16
LMBR1-213ENST00000454132 EPSTI1Q96J88 318 aa22.32■■□□□ 1.16
LMBR1-213ENST00000454132 CYP27B1O15528 508 aa22.32■■□□□ 1.16
LMBR1-213ENST00000454132 MORC3Q14149 939 aa22.32■■□□□ 1.16
LMBR1-213ENST00000454132 NTRK3Q16288 839 aa22.32■■□□□ 1.16
LMBR1-213ENST00000454132 CABLES1Q8TDN4 633 aa22.32■■□□□ 1.16
LMBR1-213ENST00000454132 FAM89AQ96GI7 184 aa22.32■■□□□ 1.16
LMBR1-213ENST00000454132 CSRNP2Q9H175 543 aa22.32■■□□□ 1.16
LMBR1-213ENST00000454132 HOOK1Q9UJC3 728 aaKnown RBP22.32■■□□□ 1.16
LMBR1-213ENST00000454132 CTAGE9A4FU28 777 aa22.31■■□□□ 1.16
LMBR1-213ENST00000454132 FBXL16Q8N461 479 aa22.31■■□□□ 1.16
LMBR1-213ENST00000454132 SLF1Q9BQI6 1058 aa22.31■■□□□ 1.16
LMBR1-213ENST00000454132 CABP5Q9NP86 173 aa22.31■■□□□ 1.16
LMBR1-213ENST00000454132 HDAC6Q9UBN7 1215 aa22.31■■□□□ 1.16
LMBR1-213ENST00000454132 FBXO2Q9UK22 296 aaPredicted RBP22.31■■□□□ 1.16
LMBR1-213ENST00000454132 A0A087X0B3 334 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 IFIT3O14879 490 aaKnown RBP22.3■■□□□ 1.16
LMBR1-213ENST00000454132 MCAMP43121 646 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 SSRP1Q08945 709 aaKnown RBP22.3■■□□□ 1.16
LMBR1-213ENST00000454132 CDKL5O76039 1030 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 HSP90B2PQ58FF3 399 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 GSPT2Q8IYD1 628 aaKnown RBP22.3■■□□□ 1.16
LMBR1-213ENST00000454132 MLKLQ8NB16 471 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 NUP133Q8WUM0 1156 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 VPS16Q9H269 839 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 FAM204AQ9H8W3 233 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 CPDO75976 1380 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 CEP112Q8N8E3 955 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.3■■□□□ 1.16
LMBR1-213ENST00000454132 MAPK8IP1Q9UQF2 711 aa22.3■■□□□ 1.16
LMBR1-213ENST00000454132 A0A1B0GTH6 734 aa22.29■■□□□ 1.16
LMBR1-213ENST00000454132 SRGAP2O75044 1071 aa22.29■■□□□ 1.16
LMBR1-213ENST00000454132 SLC12A7Q9Y666 1083 aa22.29■■□□□ 1.16
LMBR1-213ENST00000454132 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.29■■□□□ 1.16
LMBR1-213ENST00000454132 PACS2Q86VP3 889 aa22.29■■□□□ 1.16
LMBR1-213ENST00000454132 IFNL2Q8IZJ0 200 aa22.29■■□□□ 1.16
LMBR1-213ENST00000454132 CAPZA3Q96KX2 299 aa22.29■■□□□ 1.16
LMBR1-213ENST00000454132 GPR108Q9NPR9 543 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms