RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 ABCC1P33527 1531 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 PRDM15P57071 1507 aaPredicted RBP6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 VIL1P09327 827 aaKnown RBP6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 GNA15P30679 374 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 ATP2B2Q01814 1243 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 SFSWAPQ12872 951 aaKnown RBP6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 SPOCD1Q6ZMY3 1216 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 FERMT3Q86UX7 667 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 IL17RAQ96F46 866 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 ASIC4Q96FT7 647 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 DMRTB1Q96MA1 342 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 CCDC85AQ96PX6 553 aaPredicted RBP6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 NEUROD4Q9HD90 331 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 JADE2Q9NQC1 790 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 COMMD10Q9Y6G5 202 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 DEPDC5O75140 1603 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 CEP152O94986 1710 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 KIAA1210Q9ULL0 1709 aa6.85□□□□□ -1.31
PCGEM1-201ENST00000454040 WDR7Q9Y4E6 1490 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 PNMA6FA0A0J9YX94 578 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 CDC45O75419 566 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 STAU1O95793 577 aaKnown RBP6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 MZF1P28698 734 aaPredicted RBP6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 FAM193AP78312 1265 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 CCDC184Q52MB2 194 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 ZNF295-AS1Q8N0V1 137 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 CACTIN-AS1Q8N1I8 211 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 TSEN2Q8NCE0 465 aaKnown RBP6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 DCAF11Q8TEB1 546 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 CITED4Q96RK1 184 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 QTRT2Q9H974 415 aaKnown RBP6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 ZNF408Q9H9D4 720 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 BSDC1Q9NW68 430 aaPredicted RBP6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 SNTG2Q9NY99 539 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 TCEAL9Q9UHQ7 104 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 PCDHGA11Q9Y5H2 935 aa6.84□□□□□ -1.31
PCGEM1-201ENST00000454040 PLA2R1Q13018 1463 aa6.84□□□□□ -1.32
PCGEM1-201ENST00000454040 RNF17Q9BXT8 1623 aaKnown RBP6.83□□□□□ -1.32
PCGEM1-201ENST00000454040 SMTNP53814 917 aa6.83□□□□□ -1.32
PCGEM1-201ENST00000454040 GYS2P54840 703 aa6.83□□□□□ -1.32
PCGEM1-201ENST00000454040 PRPF38AQ8NAV1 312 aaKnown RBP6.83□□□□□ -1.32
PCGEM1-201ENST00000454040 NUDT8Q8WV74 236 aa6.83□□□□□ -1.32
PCGEM1-201ENST00000454040 ALKBH8Q96BT7 664 aaKnown RBP6.83□□□□□ -1.32
PCGEM1-201ENST00000454040 RNF123Q5XPI4 1314 aa6.83□□□□□ -1.32
PCGEM1-201ENST00000454040 LRPPRCP42704 1394 aaKnown RBP6.83□□□□□ -1.32
PCGEM1-201ENST00000454040 TET3O43151 1660 aa6.83□□□□□ -1.32
PCGEM1-201ENST00000454040 SPHKAPQ2M3C7 1700 aa6.83□□□□□ -1.32
PCGEM1-201ENST00000454040 ST20-MTHFSA0A0A6YYL1 179 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 KIF4AO95239 1232 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 INHAP05111 366 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 PDE6BP35913 854 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 GNALP38405 381 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 USP4Q13107 963 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 RASA3Q14644 834 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 SH3TC2Q8TF17 1288 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 COL26A1Q96A83 441 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 GPRASP2Q96D09 838 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 SLKQ9H2G2 1235 aaPredicted RBP6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 RAXQ9Y2V3 346 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 RBM19Q9Y4C8 960 aaKnown RBP6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 MYBBP1AQ9BQG0 1328 aaKnown RBP6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 A2MP01023 1474 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 BDNFP23560 247 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 EIF1AXP47813 144 aaKnown RBP6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 MASP1P48740 699 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 OXLD1Q5BKU9 147 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 KIAA0907Q7Z7F0 614 aaPredicted RBP6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 ZDHHC13Q8IUH4 622 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 SDR16C5Q8N3Y7 309 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 NIF3L1Q9GZT8 377 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 SAP130Q9H0E3 1048 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 AKTIPQ9H8T0 292 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 SIRPGQ9P1W8 387 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 CNTN3Q9P232 1028 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 GGT7Q9UJ14 662 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 SLC6A14Q9UN76 642 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 AK5Q9Y6K8 562 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 ERCC6L2Q5T890 1561 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 ABCA9Q8IUA7 1624 aa6.82□□□□□ -1.32
PCGEM1-201ENST00000454040 IQGAP1P46940 1657 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 TRPM2O94759 1503 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 PTPRTO14522 1441 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 PARD3Q8TEW0 1356 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 ESYT3A0FGR9 886 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 MSL1Q68DK7 614 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 ALG1LQ6GMV1 187 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 HS2ST1Q7LGA3 356 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 RAB44Q7Z6P3 723 aaPredicted RBP6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 FTSJ3Q8IY81 847 aaKnown RBP6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 SCYL1Q96KG9 808 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 DEPDC7Q96QD5 511 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 CHST12Q9NRB3 414 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 SFMBT1Q9UHJ3 866 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 DOLKQ9UPQ8 538 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 NUDCQ9Y266 331 aa6.81□□□□□ -1.32
PCGEM1-201ENST00000454040 VWDEQ8N2E2 1590 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 SCAPERQ9BY12 1400 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 CDK2AP1O14519 115 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 KLF4O43474 513 aa6.8□□□□□ -1.32
PCGEM1-201ENST00000454040 LDHAP00338 332 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms