RNA–Protein interactions for RNA: ENST00000454035.5

MDH1-208, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-208ENST00000454035 STRIP1Q5VSL9 837 aa7.32□□□□□ -1.24
MDH1-208ENST00000454035 PHLDB3Q6NSJ2 640 aa7.32□□□□□ -1.24
MDH1-208ENST00000454035 USP50Q70EL3 339 aaPredicted RBP7.32□□□□□ -1.24
MDH1-208ENST00000454035 FBXO33Q7Z6M2 555 aa7.32□□□□□ -1.24
MDH1-208ENST00000454035 LDHDQ86WU2 507 aa7.32□□□□□ -1.24
MDH1-208ENST00000454035 ITPRIPQ8IWB1 547 aa7.32□□□□□ -1.24
MDH1-208ENST00000454035 PLEKHM2Q8IWE5 1019 aa7.32□□□□□ -1.24
MDH1-208ENST00000454035 AGBL3Q8NEM8 1001 aa7.32□□□□□ -1.24
MDH1-208ENST00000454035 FAM84BQ96KN1 310 aaPredicted RBP7.32□□□□□ -1.24
MDH1-208ENST00000454035 CD209Q9NNX6 404 aa7.32□□□□□ -1.24
MDH1-208ENST00000454035 ADARB2Q9NS39 739 aaKnown RBP7.32□□□□□ -1.24
MDH1-208ENST00000454035 CEP126Q9P2H0 1117 aa7.32□□□□□ -1.24
MDH1-208ENST00000454035 PGAP2Q9UHJ9 254 aa7.32□□□□□ -1.24
MDH1-208ENST00000454035 SCN9AQ15858 1988 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 PNMA6EA0A0J9YXQ4 647 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 SHTN1A0MZ66 631 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 H7C1D1 291 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 ITGBL1O95965 494 aaPredicted RBP7.31□□□□□ -1.24
MDH1-208ENST00000454035 IL15P40933 162 aaPredicted RBP7.31□□□□□ -1.24
MDH1-208ENST00000454035 LBX1P52954 281 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 HIRAP54198 1017 aaPredicted RBP7.31□□□□□ -1.24
MDH1-208ENST00000454035 ZNF280AP59817 542 aaPredicted RBP7.31□□□□□ -1.24
MDH1-208ENST00000454035 MVPQ14764 893 aaKnown RBP7.31□□□□□ -1.24
MDH1-208ENST00000454035 PTPRNQ16849 979 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 CRTC2Q53ET0 693 aaPredicted RBP7.31□□□□□ -1.24
MDH1-208ENST00000454035 TTLL5Q6EMB2 1281 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 ZNF804AQ7Z570 1209 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 TDRD7Q8NHU6 1098 aaKnown RBP7.31□□□□□ -1.24
MDH1-208ENST00000454035 SSH3Q8TE77 659 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 AIDAQ96BJ3 306 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 THAP11Q96EK4 314 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 YTHDC1Q96MU7 727 aaKnown RBP7.31□□□□□ -1.24
MDH1-208ENST00000454035 PRR14Q9BWN1 585 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 ZBTB40Q9NUA8 1239 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 PA2G4Q9UQ80 394 aaKnown RBP7.31□□□□□ -1.24
MDH1-208ENST00000454035 CNTNAP1P78357 1384 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 A0A1B0GUL6 1792 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 ADAMTSL1Q8N6G6 1762 aa7.31□□□□□ -1.24
MDH1-208ENST00000454035 FAM196BA6NMK8 535 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L15C9J2P7 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L10C9JJH3 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L13C9JLJ4 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L12C9JPN9 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L11C9JVI0 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L21D6R901 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L18D6R9N7 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L22D6RA61 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L17D6RBQ6 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L19D6RCP7 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L20D6RJB6 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 SASH1O94885 1247 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 FMNL1O95466 1100 aaPredicted RBP7.3□□□□□ -1.24
MDH1-208ENST00000454035 JUNDP17535 347 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 HIBADHP31937 336 aaKnown RBP7.3□□□□□ -1.24
MDH1-208ENST00000454035 GYG1P46976 350 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 CTCFP49711 727 aaPredicted RBP7.3□□□□□ -1.24
MDH1-208ENST00000454035 VEGFBP49765 207 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 MMP14P50281 582 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 FKBP1AP62942 108 aaKnown RBP7.3□□□□□ -1.24
MDH1-208ENST00000454035 USP17L24Q0WX57 530 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 PUM3Q15397 648 aaKnown RBP7.3□□□□□ -1.24
MDH1-208ENST00000454035 SLFNL1Q499Z3 407 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 EAPPQ56P03 285 aaPredicted RBP7.3□□□□□ -1.24
MDH1-208ENST00000454035 C20orf194Q5TEA3 1177 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 Q6ZNB5 142 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.3□□□□□ -1.24
MDH1-208ENST00000454035 LPIN2Q92539 896 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 ABHD8Q96I13 439 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 SIL1Q9H173 461 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 PRDM10Q9NQV6 1147 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 DDX19BQ9UMR2 479 aa7.3□□□□□ -1.24
MDH1-208ENST00000454035 FAM205AQ6ZU69 1335 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 MYO3BQ8WXR4 1341 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 PASKQ96RG2 1323 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 TK2O00142 265 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 EGFRP00533 1210 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 IFIT1P09914 478 aaKnown RBP7.29□□□□□ -1.24
MDH1-208ENST00000454035 RASA1P20936 1047 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 PPP4CP60510 307 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 GTF2IP78347 998 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 NCOA4Q13772 614 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 CEP85Q6P2H3 762 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 CNTROBQ8N137 903 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 CERS5Q8N5B7 392 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 TRPM4Q8TD43 1214 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 MXD3Q9BW11 206 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 CHMP4BQ9H444 224 aaKnown RBP7.29□□□□□ -1.24
MDH1-208ENST00000454035 NOP58Q9Y2X3 529 aaKnown RBP7.29□□□□□ -1.24
MDH1-208ENST00000454035 PCDHB9Q9Y5E1 797 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 PSME4Q14997 1843 aa7.29□□□□□ -1.24
MDH1-208ENST00000454035 CCDC85CA6NKD9 419 aa7.28□□□□□ -1.24
MDH1-208ENST00000454035 NR1I2O75469 434 aa7.28□□□□□ -1.24
MDH1-208ENST00000454035 HSPA8P11142 646 aaKnown RBP7.28□□□□□ -1.24
MDH1-208ENST00000454035 SLC5A1P13866 664 aa7.28□□□□□ -1.24
MDH1-208ENST00000454035 BCAMP50895 628 aa7.28□□□□□ -1.24
MDH1-208ENST00000454035 TFCP2Q12800 502 aa7.28□□□□□ -1.24
MDH1-208ENST00000454035 G3BP1Q13283 466 aaKnown RBP eCLIP7.28□□□□□ -1.241e-8■□□□□ 10.6
MDH1-208ENST00000454035 PTK7Q13308 1070 aa7.28□□□□□ -1.24
MDH1-208ENST00000454035 ATP2B3Q16720 1220 aa7.28□□□□□ -1.24
MDH1-208ENST00000454035 TBC1D10BQ4KMP7 808 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms