RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 ABLIM1O14639 778 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 MGRN1O60291 552 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 CAND2O75155 1236 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 FAM107AO95990 144 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 IFIT2P09913 472 aaKnown RBP9.45□□□□□ -0.9
SMCO1-202ENST00000452776 XRCC4Q13426 336 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 KARSQ15046 597 aaKnown RBP9.45□□□□□ -0.9
SMCO1-202ENST00000452776 STK38Q15208 465 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 LCE2DQ5TA82 110 aaPredicted RBP9.45□□□□□ -0.9
SMCO1-202ENST00000452776 EMBQ6PCB8 327 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 CNGA4Q8IV77 575 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 RHPN1Q8TCX5 695 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 CTAGE1Q96RT6 745 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMCO1-202ENST00000452776 POLR3EQ9NVU0 708 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 RGL1Q9NZL6 768 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 TBC1D2BQ9UPU7 963 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 ZC3H4Q9UPT8 1303 aaKnown RBP9.45□□□□□ -0.9
SMCO1-202ENST00000452776 CEMIPQ8WUJ3 1361 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 VWDEQ8N2E2 1590 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 NUTM2FA1L443 756 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 AGPSO00116 658 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 DNAJC8O75937 253 aaPredicted RBP9.44□□□□□ -0.9
SMCO1-202ENST00000452776 GCLCP48506 637 aaPredicted RBP9.44□□□□□ -0.9
SMCO1-202ENST00000452776 RAB27AP51159 221 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 ROR2Q01974 943 aaKnown RBP9.44□□□□□ -0.9
SMCO1-202ENST00000452776 PTH1RQ03431 593 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 ITIH3Q06033 890 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 TOB2Q14106 344 aaPredicted RBP9.44□□□□□ -0.9
SMCO1-202ENST00000452776 KRT24Q2M2I5 525 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 NUTM2DQ5VT03 806 aaPredicted RBP9.44□□□□□ -0.9
SMCO1-202ENST00000452776 NUTM2GQ5VZR2 741 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 SLC4A10Q6U841 1118 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 C6orf89Q6UWU4 347 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 NUTM2AQ8IVF1 878 aaPredicted RBP9.44□□□□□ -0.9
SMCO1-202ENST00000452776 RBM12BQ8IXT5 1001 aaKnown RBP9.44□□□□□ -0.9
SMCO1-202ENST00000452776 ZNF473Q8WTR7 871 aaKnown RBP9.44□□□□□ -0.9
SMCO1-202ENST00000452776 MKL1Q969V6 931 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 ALS2CR12Q96Q35 445 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 USP28Q96RU2 1077 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 SELENOOQ9BVL4 669 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 TRPC6Q9Y210 931 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 SAMM50Q9Y512 469 aa9.44□□□□□ -0.9
SMCO1-202ENST00000452776 ARHGAP5Q13017 1502 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 A0A1W2PP64 1363 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 GOLGA6L10A0A0M3HER8 536 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 PDLIM1O00151 329 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 FECHP22830 423 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 NDUFA8P51970 172 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 PSMD2Q13200 908 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 NAA35Q5VZE5 725 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 MIS18BP1Q6P0N0 1132 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 SYNE3Q6ZMZ3 975 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 SLC35F6Q8N357 371 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 MLKLQ8NB16 471 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 LINC00301Q8NCQ3 95 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 ENOX1Q8TC92 643 aaKnown RBP9.43□□□□□ -0.9
SMCO1-202ENST00000452776 ANKRD24Q8TF21 1146 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 SCLT1Q96NL6 688 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 KDM4CQ9H3R0 1056 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 LZTFL1Q9NQ48 299 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 FANCLQ9NW38 375 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 FRMPD1Q5SYB0 1578 aa9.43□□□□□ -0.9
SMCO1-202ENST00000452776 H7C1W4 665 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 SPTLC2O15270 562 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 MAFGO15525 162 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 SURF6O75683 361 aaKnown RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 UBTFL1P0CB47 393 aaPredicted RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 ATP1A3P13637 1013 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 LSP1P33241 339 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 PAPOLAP51003 745 aaKnown RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 AMPD2Q01433 879 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 CEBPZQ03701 1054 aaKnown RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 TRIM14Q14142 442 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 GLE1Q53GS7 698 aaKnown RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 SPECC1Q5M775 1068 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 CWF19L1Q69YN2 538 aaKnown RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 ZNF662Q6ZS27 426 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 TRAPPC11Q7Z392 1133 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 CLASRPQ8N2M8 674 aaKnown RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 ZNF513Q8N8E2 541 aaPredicted RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 NUP133Q8WUM0 1156 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 CUL5Q93034 780 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 CCT8L2Q96SF2 557 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 HSD3B7Q9H2F3 369 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 MRPL44Q9H9J2 332 aaKnown RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 ECHDC1Q9NTX5 307 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 WWC3Q9ULE0 1092 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 TPX2Q9ULW0 747 aaKnown RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 SAR1BQ9Y6B6 198 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 RPS6KL1Q9Y6S9 549 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 NPHP4O75161 1426 aaPredicted RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 UBN2Q6ZU65 1347 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 PNMA6EA0A0J9YXQ4 647 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 A0A1B0GVL5 298 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 CFAP73A6NFT4 308 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 PSMD14O00487 310 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 SEMA3EO15041 775 aa9.42□□□□□ -0.9
SMCO1-202ENST00000452776 BUB1BO60566 1050 aaPredicted RBP9.42□□□□□ -0.9
SMCO1-202ENST00000452776 PPP1R37O75864 691 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms