RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CPA4Q9UI42 421 aa15.72■□□□□ 0.11
CHD3-206ENST00000452447 HERC5Q9UII4 1024 aaKnown RBP15.72■□□□□ 0.11
CHD3-206ENST00000452447 PTPRFP10586 1907 aa15.72■□□□□ 0.11
CHD3-206ENST00000452447 CYP7A1P22680 504 aa15.71■□□□□ 0.11
CHD3-206ENST00000452447 C17orf99Q6UX52 265 aa15.71■□□□□ 0.11
CHD3-206ENST00000452447 MAPKAPK5Q8IW41 473 aa15.71■□□□□ 0.11
CHD3-206ENST00000452447 KIF1BPQ96EK5 621 aa15.71■□□□□ 0.11
CHD3-206ENST00000452447 BCL11AQ9H165 835 aa15.71■□□□□ 0.11
CHD3-206ENST00000452447 MKI67P46013 3256 aaKnown RBP15.71■□□□□ 0.11
CHD3-206ENST00000452447 PHIPQ8WWQ0 1821 aa15.71■□□□□ 0.1
CHD3-206ENST00000452447 TRIM75PA6NK02 468 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 GNRH1P01148 92 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 MAP3K12Q12852 859 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 GPAT2Q6NUI2 795 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 NBPF11Q86T75 865 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 CERS3Q8IU89 383 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 MAGEB6Q8N7X4 407 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 TRIM34Q9BYJ4 488 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 NDUFB9Q9Y6M9 179 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 FOCADQ5VW36 1801 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 ATAD5Q96QE3 1844 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 RAB11FIP3O75154 756 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 ECM2O94769 699 aaPredicted RBP15.7■□□□□ 0.1
CHD3-206ENST00000452447 IFIT2P09913 472 aaKnown RBP15.7■□□□□ 0.1
CHD3-206ENST00000452447 CYP2C8P10632 490 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 PDE3AQ14432 1141 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 SLC9C1Q4G0N8 1177 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 ARHGAP39Q9C0H5 1083 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.7■□□□□ 0.1
CHD3-206ENST00000452447 PTCH2Q9Y6C5 1203 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 FLT1P17948 1338 aa15.7■□□□□ 0.1
CHD3-206ENST00000452447 CAP2P40123 477 aa15.69■□□□□ 0.1
CHD3-206ENST00000452447 TTF1Q15361 905 aaPredicted RBP15.69■□□□□ 0.1
CHD3-206ENST00000452447 TMED8Q6PL24 325 aaPredicted RBP15.69■□□□□ 0.1
CHD3-206ENST00000452447 CCDC84Q86UT8 332 aaPredicted RBP15.69■□□□□ 0.1
CHD3-206ENST00000452447 FOXP4Q8IVH2 680 aaPredicted RBP15.69■□□□□ 0.1
CHD3-206ENST00000452447 SIRT2Q8IXJ6 389 aa15.69■□□□□ 0.1
CHD3-206ENST00000452447 CRACR2BQ8N4Y2 399 aaPredicted RBP15.69■□□□□ 0.1
CHD3-206ENST00000452447 MIGA1Q8NAN2 632 aa15.69■□□□□ 0.1
CHD3-206ENST00000452447 ARMC5Q96C12 935 aa15.69■□□□□ 0.1
CHD3-206ENST00000452447 TBC1D2Q9BYX2 928 aa15.69■□□□□ 0.1
CHD3-206ENST00000452447 ANTXR1Q9H6X2 564 aa15.69■□□□□ 0.1
CHD3-206ENST00000452447 PALD1Q9ULE6 856 aa15.69■□□□□ 0.1
CHD3-206ENST00000452447 SLC45A1Q9Y2W3 748 aa15.69■□□□□ 0.1
CHD3-206ENST00000452447 MYH1P12882 1939 aa15.68■□□□□ 0.1
CHD3-206ENST00000452447 ZSWIM8A7E2V4 1837 aa15.68■□□□□ 0.1
CHD3-206ENST00000452447 FMNL1O95466 1100 aaPredicted RBP15.68■□□□□ 0.1
CHD3-206ENST00000452447 HLA-DOAP06340 250 aa15.68■□□□□ 0.1
CHD3-206ENST00000452447 HOXD10P28358 340 aa15.68■□□□□ 0.1
CHD3-206ENST00000452447 PSMC4P43686 418 aa15.68■□□□□ 0.1
CHD3-206ENST00000452447 PRMT2P55345 433 aa15.68■□□□□ 0.1
CHD3-206ENST00000452447 DYNLL1P63167 89 aaKnown RBP15.68■□□□□ 0.1
CHD3-206ENST00000452447 ZNF280CQ8ND82 737 aa15.68■□□□□ 0.1
CHD3-206ENST00000452447 ADGRA2Q96PE1 1338 aa15.67■□□□□ 0.1
CHD3-206ENST00000452447 USP17L5A8MUK1 530 aa15.67■□□□□ 0.1
CHD3-206ENST00000452447 USP5P45974 858 aa15.67■□□□□ 0.1
CHD3-206ENST00000452447 SPP2Q13103 211 aa15.67■□□□□ 0.1
CHD3-206ENST00000452447 SMCR8Q8TEV9 937 aaPredicted RBP15.67■□□□□ 0.1
CHD3-206ENST00000452447 TMEM106CQ9BVX2 250 aa15.67■□□□□ 0.1
CHD3-206ENST00000452447 AS3MTQ9HBK9 375 aa15.67■□□□□ 0.1
CHD3-206ENST00000452447 SAP30BPQ9UHR5 308 aaKnown RBP15.67■□□□□ 0.1
CHD3-206ENST00000452447 ASNSP08243 561 aa15.66■□□□□ 0.1
CHD3-206ENST00000452447 C20orf194Q5TEA3 1177 aa15.66■□□□□ 0.1
CHD3-206ENST00000452447 ZNF333Q96JL9 665 aa15.66■□□□□ 0.1
CHD3-206ENST00000452447 AGTPBP1Q9UPW5 1226 aa15.66■□□□□ 0.1
CHD3-206ENST00000452447 SIPA1L1O43166 1804 aa15.66■□□□□ 0.1
CHD3-206ENST00000452447 BCRP11274 1271 aa15.66■□□□□ 0.1
CHD3-206ENST00000452447 RRP1BQ14684 758 aaKnown RBP15.66■□□□□ 0.1
CHD3-206ENST00000452447 PROCA1Q8NCQ7 364 aaPredicted RBP15.66■□□□□ 0.1
CHD3-206ENST00000452447 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHD3-206ENST00000452447 TRIM47Q96LD4 638 aa15.66■□□□□ 0.1
CHD3-206ENST00000452447 DNAJC2Q99543 621 aaKnown RBP15.66■□□□□ 0.1
CHD3-206ENST00000452447 SRRDQ9UH36 339 aa15.66■□□□□ 0.1
CHD3-206ENST00000452447 PNMA3Q9UL41 463 aa15.66■□□□□ 0.1
CHD3-206ENST00000452447 MGAMO43451 1857 aa15.66■□□□□ 0.1
CHD3-206ENST00000452447 POTEFA5A3E0 1075 aa15.65■□□□□ 0.1
CHD3-206ENST00000452447 GOLIM4O00461 696 aa15.65■□□□□ 0.1
CHD3-206ENST00000452447 FCGRTP55899 365 aa15.65■□□□□ 0.1
CHD3-206ENST00000452447 SLC4A8Q2Y0W8 1093 aa15.65■□□□□ 0.1
CHD3-206ENST00000452447 SLC9C2Q5TAH2 1124 aa15.65■□□□□ 0.1
CHD3-206ENST00000452447 RAET1EQ8TD07 263 aa15.65■□□□□ 0.1
CHD3-206ENST00000452447 DOCK3Q8IZD9 2030 aa15.64■□□□□ 0.09
CHD3-206ENST00000452447 RBBP6Q7Z6E9 1792 aaKnown RBP15.64■□□□□ 0.09
CHD3-206ENST00000452447 OSBPP22059 807 aa15.64■□□□□ 0.09
CHD3-206ENST00000452447 CTGFP29279 349 aa15.64■□□□□ 0.09
CHD3-206ENST00000452447 HMGCS2P54868 508 aa15.64■□□□□ 0.09
CHD3-206ENST00000452447 PABPC4Q13310 644 aaKnown RBP eCLIP15.64■□□□□ 0.09
CHD3-206ENST00000452447 TREML2Q5T2D2 321 aa15.64■□□□□ 0.09
CHD3-206ENST00000452447 METTL16Q86W50 562 aaKnown RBP15.64■□□□□ 0.09
CHD3-206ENST00000452447 SH3TC2Q8TF17 1288 aa15.64■□□□□ 0.09
CHD3-206ENST00000452447 DNAJC18Q9H819 358 aa15.64■□□□□ 0.09
CHD3-206ENST00000452447 MYCP01106 439 aaPredicted RBP15.63■□□□□ 0.09
CHD3-206ENST00000452447 TTC6Q86TZ1 520 aa15.63■□□□□ 0.09
CHD3-206ENST00000452447 LRRCC1Q9C099 1032 aa15.63■□□□□ 0.09
CHD3-206ENST00000452447 GINM1Q9NU53 330 aa15.63■□□□□ 0.09
CHD3-206ENST00000452447 MYPNQ86TC9 1320 aa15.63■□□□□ 0.09
CHD3-206ENST00000452447 MAGEB6P1A0A0J9YX57 407 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 GDF11O95390 407 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 PDE6AP16499 860 aa15.62■□□□□ 0.09
CHD3-206ENST00000452447 MTMR2Q13614 643 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms