RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 SIPA1L3O60292 1781 aaPredicted RBP12.77□□□□□ -0.36
DDR1-239ENST00000452441 CTIFO43310 598 aaKnown RBP12.77□□□□□ -0.36
DDR1-239ENST00000452441 CDC27P30260 824 aa12.77□□□□□ -0.36
DDR1-239ENST00000452441 RBM43Q6ZSC3 357 aaKnown RBP12.77□□□□□ -0.36
DDR1-239ENST00000452441 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.36
DDR1-239ENST00000452441 RNF41Q9H4P4 317 aaPredicted RBP12.77□□□□□ -0.36
DDR1-239ENST00000452441 SERTAD1Q9UHV2 236 aa12.77□□□□□ -0.36
DDR1-239ENST00000452441 PAXBP1Q9Y5B6 917 aa12.77□□□□□ -0.36
DDR1-239ENST00000452441 TSGA10IPQ3SY00 556 aa12.77□□□□□ -0.37
DDR1-239ENST00000452441 GUCY1A2P33402 732 aa12.77□□□□□ -0.37
DDR1-239ENST00000452441 IL6STP40189 918 aaPredicted RBP12.77□□□□□ -0.37
DDR1-239ENST00000452441 IQCB1Q15051 598 aa12.77□□□□□ -0.37
DDR1-239ENST00000452441 ESR2Q92731 530 aa12.77□□□□□ -0.37
DDR1-239ENST00000452441 PCDHA5Q9Y5H7 936 aa12.77□□□□□ -0.37
DDR1-239ENST00000452441 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.37
DDR1-239ENST00000452441 ARHGAP29Q52LW3 1261 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 ZNF444Q8N0Y2 327 aaPredicted RBP12.76□□□□□ -0.37
DDR1-239ENST00000452441 LCORLQ8N3X6 602 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 LINC00301Q8NCQ3 95 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 CCDC12Q8WUD4 166 aaPredicted RBP12.76□□□□□ -0.37
DDR1-239ENST00000452441 ALDH8A1Q9H2A2 487 aaPredicted RBP12.76□□□□□ -0.37
DDR1-239ENST00000452441 CAVIN2O95810 425 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 ADALQ6DHV7 355 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 VPS16Q9H269 839 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 NFE2L3Q9Y4A8 694 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 USP17L12C9JPN9 530 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 USP17L21D6R901 530 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 FDPSP14324 419 aaKnown RBP12.76□□□□□ -0.37
DDR1-239ENST00000452441 KRT23Q9C075 422 aa12.76□□□□□ -0.37
DDR1-239ENST00000452441 PHACTR2O75167 634 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 RASGRP4Q8TDF6 673 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 DRC1Q96MC2 740 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 NUP88Q99567 741 aaPredicted RBP12.75□□□□□ -0.37
DDR1-239ENST00000452441 RCOR1Q9UKL0 485 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 CCDC196A0A1B0GTZ2 297 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 TMEM232C9JQI7 657 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 CIAO1O76071 339 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 KIF4BQ2VIQ3 1234 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 CPVLQ9H3G5 476 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 ADD2P35612 726 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 PARP10Q53GL7 1025 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 PIK3AP1Q6ZUJ8 805 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
DDR1-239ENST00000452441 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
DDR1-239ENST00000452441 CARD6Q9BX69 1037 aa12.75□□□□□ -0.37
DDR1-239ENST00000452441 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
DDR1-239ENST00000452441 FAM205CA6NFA0 338 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 NMT2O60551 498 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 WDHD1O75717 1129 aaPredicted RBP12.74□□□□□ -0.37
DDR1-239ENST00000452441 RPS8P62241 208 aaKnown RBP12.74□□□□□ -0.37
DDR1-239ENST00000452441 WASF1Q92558 559 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 NEDD4P46934 1319 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 N4BP3O15049 544 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 HIBADHP31937 336 aaKnown RBP12.74□□□□□ -0.37
DDR1-239ENST00000452441 FILIP1LQ4L180 1135 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 RRAGBQ5VZM2 374 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 MRFAP1L1Q96HT8 127 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 GDAP1L1Q96MZ0 367 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 CRNKL1Q9BZJ0 848 aaKnown RBP12.74□□□□□ -0.37
DDR1-239ENST00000452441 MROH5Q6ZUA9 1318 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 GOLGA8HP0CJ92 632 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 GRIN1Q05586 938 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 MCM6Q14566 821 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 SMARCC2Q8TAQ2 1214 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
DDR1-239ENST00000452441 GTPBP4Q9BZE4 634 aaKnown RBP12.74□□□□□ -0.37
DDR1-239ENST00000452441 TRIM37O94972 964 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 KIF23Q02241 960 aaPredicted RBP12.73□□□□□ -0.37
DDR1-239ENST00000452441 AKNAD1Q5T1N1 836 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 USP49Q70CQ1 688 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 HEATR3Q7Z4Q2 680 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 MAPKAPK5Q8IW41 473 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 KRI1Q8N9T8 703 aaKnown RBP12.73□□□□□ -0.37
DDR1-239ENST00000452441 PLEKHA4Q9H4M7 779 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 PCDHB6Q9Y5E3 794 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 IDEP14735 1019 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 MATR3P43243 847 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDR1-239ENST00000452441 MYL5Q02045 173 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 TRAPPC3LQ5T215 181 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 FAM196AQ6ZSG2 479 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 DHX40Q8IX18 779 aaKnown RBP12.73□□□□□ -0.37
DDR1-239ENST00000452441 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
DDR1-239ENST00000452441 ANKRD20A12PQ8NF67 263 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 TANGO6Q9C0B7 1094 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
DDR1-239ENST00000452441 UTP14CQ5TAP6 766 aaKnown RBP12.73□□□□□ -0.37
DDR1-239ENST00000452441 CNBD1Q8NA66 436 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 DPF2Q92785 391 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 CELF1Q92879 486 aaKnown RBP12.73□□□□□ -0.37
DDR1-239ENST00000452441 FEZ1Q99689 392 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 KAT14Q9H8E8 782 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 GPR108Q9NPR9 543 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
DDR1-239ENST00000452441 NEMFO60524 1076 aa12.72□□□□□ -0.37
DDR1-239ENST00000452441 UFL1O94874 794 aa12.72□□□□□ -0.37
DDR1-239ENST00000452441 CASQ1P31415 396 aa12.72□□□□□ -0.37
DDR1-239ENST00000452441 DHX37Q8IY37 1157 aaKnown RBP12.72□□□□□ -0.37
DDR1-239ENST00000452441 GPKOWQ92917 476 aaPredicted RBP eCLIP12.72□□□□□ -0.37
DDR1-239ENST00000452441 EPSTI1Q96J88 318 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms